fix(deps): update lobster-ai pin in agent packages from ~=1.0.0 to ~=1.1.0

cewinharhar · cewinharhar · commit 730accc18bf4 · 2026-03-05T20:31:03.000-08:00
Agent packages pinned lobster-ai~=1.0.0 which excludes 1.1.0.
Also enumerate workspace members explicitly (no wildcard).
diff --git a/packages/lobster-drug-discovery/pyproject.toml b/packages/lobster-drug-discovery/pyproject.toml
@@ -22,7 +22,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "anndata>=0.9.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
diff --git a/packages/lobster-genomics/pyproject.toml b/packages/lobster-genomics/pyproject.toml
@@ -21,7 +21,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "anndata>=0.9.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
diff --git a/packages/lobster-metabolomics/pyproject.toml b/packages/lobster-metabolomics/pyproject.toml
@@ -21,7 +21,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "anndata>=0.9.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
diff --git a/packages/lobster-proteomics/pyproject.toml b/packages/lobster-proteomics/pyproject.toml
@@ -21,7 +21,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "anndata>=0.9.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
diff --git a/packages/lobster-research/pyproject.toml b/packages/lobster-research/pyproject.toml
@@ -30,7 +30,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "pandas>=1.5.0",
     "pydantic>=2.0.0",
 ]
diff --git a/packages/lobster-transcriptomics/pyproject.toml b/packages/lobster-transcriptomics/pyproject.toml
@@ -31,7 +31,7 @@ classifiers = [
 ]
 requires-python = ">=3.12,<3.14"
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "anndata>=0.9.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
diff --git a/packages/lobster-visualization/pyproject.toml b/packages/lobster-visualization/pyproject.toml
@@ -23,7 +23,7 @@ classifiers = [
 ]
 keywords = ["bioinformatics", "visualization", "plotting", "single-cell", "omics"]
 dependencies = [
-    "lobster-ai~=1.0.0",
+    "lobster-ai~=1.1.0",
     "numpy>=1.23.0",
     "pandas>=1.5.0",
     "plotly>=5.0.0",

Original file line number	Diff line number	Diff line change
`@@ -22,7 +22,7 @@ classifiers = [`
`22`	`22`	`]`
`23`	`23`	`requires-python = ">=3.12,<3.14"`
`24`	`24`	`dependencies = [`
`25`		`- "lobster-ai~=1.0.0",`
	`25`	`+ "lobster-ai~=1.1.0",`
`26`	`26`	`"anndata>=0.9.0",`
`27`	`27`	`"numpy>=1.23.0",`
`28`	`28`	`"pandas>=1.5.0",`
Original file line number	Diff line number	Diff line change
`@@ -21,7 +21,7 @@ classifiers = [`
`21`	`21`	`]`
`22`	`22`	`requires-python = ">=3.12,<3.14"`
`23`	`23`	`dependencies = [`
`24`		`- "lobster-ai~=1.0.0",`
	`24`	`+ "lobster-ai~=1.1.0",`
`25`	`25`	`"anndata>=0.9.0",`
`26`	`26`	`"numpy>=1.23.0",`
`27`	`27`	`"pandas>=1.5.0",`
Original file line number	Diff line number	Diff line change
`@@ -30,7 +30,7 @@ classifiers = [`
`30`	`30`	`]`
`31`	`31`	`requires-python = ">=3.12,<3.14"`
`32`	`32`	`dependencies = [`
`33`		`- "lobster-ai~=1.0.0",`
	`33`	`+ "lobster-ai~=1.1.0",`
`34`	`34`	`"pandas>=1.5.0",`
`35`	`35`	`"pydantic>=2.0.0",`
`36`	`36`	`]`
Original file line number	Diff line number	Diff line change
`@@ -31,7 +31,7 @@ classifiers = [`
`31`	`31`	`]`
`32`	`32`	`requires-python = ">=3.12,<3.14"`
`33`	`33`	`dependencies = [`
`34`		`- "lobster-ai~=1.0.0",`
	`34`	`+ "lobster-ai~=1.1.0",`
`35`	`35`	`"anndata>=0.9.0",`
`36`	`36`	`"numpy>=1.23.0",`
`37`	`37`	`"pandas>=1.5.0",`
Original file line number	Diff line number	Diff line change
`@@ -23,7 +23,7 @@ classifiers = [`
`23`	`23`	`]`
`24`	`24`	`keywords = ["bioinformatics", "visualization", "plotting", "single-cell", "omics"]`
`25`	`25`	`dependencies = [`
`26`		`- "lobster-ai~=1.0.0",`
	`26`	`+ "lobster-ai~=1.1.0",`
`27`	`27`	`"numpy>=1.23.0",`
`28`	`28`	`"pandas>=1.5.0",`
`29`	`29`	`"plotly>=5.0.0",`