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‎revdep/README.md‎

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@@ -1,6 +1,6 @@
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# Revdeps
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## Failed to check (26)
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## Failed to check (27)
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|package |version |error |warning |note |
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|:--------------------------|:-------|:------|:-------|:----|
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|NA |? | | | |
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|NA |? | | | |
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|precautionary |0.1-5 |1 | | |
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|psychonetrics |? | | | |
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|NA |? | | | |
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|RichR |? | | | |
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|[ripe](failures.md#ripe) |0.1.0 |__+1__ | | |
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|spectralAnalysis |? | | | |
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|[torch](failures.md#torch) |0.1.1 |__+1__ | |-1 |
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## New problems (6)
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## New problems (5)
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|package |version |error |warning |note |
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|:----------------------------------------|:-------|:------|:-------|:----|
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|[datamaps](problems.md#datamaps) |0.0.3 |__+1__ | | |
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|[jqr](problems.md#jqr) |1.1.0 |__+2__ | | |
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|[rcrtan](problems.md#rcrtan) |0.1.1 |__+1__ | | |
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|[reproducible](problems.md#reproducible) |1.2.1 |__+2__ | | |
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|[sketch](problems.md#sketch) |1.0.3 |__+2__ | | |
42+
|[TCIU](problems.md#tciu) |1.1.0 | |__+1__ |1 |
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|[tidytidbits](problems.md#tidytidbits) |0.2.2 |__+1__ | | |
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‎revdep/failures.md‎

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@@ -73,7 +73,7 @@ Run `cloud_details(, "NA")` for more info
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* Version: 1.3.4
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* Source code: https://github.com/cran/CB2
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* Date/Publication: 2020-07-24 09:42:24 UTC
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* Number of recursive dependencies: 106
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* Number of recursive dependencies: 105
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Run `cloud_details(, "CB2")` for more info
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* URL: https://github.com/zedoul/cbar
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* BugReports: https://github.com/zedoul/cbar/issues
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* Date/Publication: 2017-10-24 13:20:22 UTC
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* Number of recursive dependencies: 67
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* Number of recursive dependencies: 66
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Run `cloud_details(, "cbar")` for more info
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* Source code: https://github.com/cran/dimRed
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* URL: https://github.com/gdkrmr/dimRed
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* Date/Publication: 2019-05-08 08:10:07 UTC
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* Number of recursive dependencies: 140
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* Number of recursive dependencies: 139
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Run `cloud_details(, "dimRed")` for more info
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* Version: 0.0.4
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* Source code: https://github.com/cran/ggmsa
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* Date/Publication: 2020-05-28 10:50:10 UTC
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* Number of recursive dependencies: 82
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* Number of recursive dependencies: 81
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Run `cloud_details(, "ggmsa")` for more info
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* URL: https://github.com/ropensci/jstor, https://docs.ropensci.org/jstor
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* BugReports: https://github.com/ropensci/jstor/issues
538538
* Date/Publication: 2020-06-04 04:50:03 UTC
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* Number of recursive dependencies: 74
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* Number of recursive dependencies: 73
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Run `cloud_details(, "jstor")` for more info
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* URL: https://symbolixau.github.io/mapdeck/articles/mapdeck.html
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* BugReports: https://github.com/SymbolixAU/mapdeck/issues
626626
* Date/Publication: 2020-09-04 05:22:10 UTC
627-
* Number of recursive dependencies: 75
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* Number of recursive dependencies: 83
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Run `cloud_details(, "mapdeck")` for more info
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** libs
650650
g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c RcppExports.cpp -o RcppExports.o
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g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c aggregate.cpp -o aggregate.o
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/tmp/ccqSUMiy.s: Assembler messages:
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/tmp/ccqSUMiy.s: Fatal error: can't close aggregate.o: No space left on device
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/tmp/ccZjU7ZO.s: Assembler messages:
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/tmp/ccZjU7ZO.s: Fatal error: can't close aggregate.o: No space left on device
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make: *** [/usr/lib/R/etc/Makeconf:177: aggregate.o] Error 1
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ERROR: compilation failed for package ‘mapdeck’
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* removing ‘/tmp/workdir/mapdeck/new/mapdeck.Rcheck/mapdeck’
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g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c od.cpp -o od.o
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g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c path.cpp -o path.o
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g++ -std=gnu++11 -I"/usr/share/R/include" -DNDEBUG -DSTRICT_R_HEADERS -DBOOST_NO_AUTO_PTR -I"/usr/local/lib/R/site-library/BH/include" -I"/usr/local/lib/R/site-library/colourvalues/include" -I"/usr/local/lib/R/site-library/geojsonsf/include" -I"/usr/local/lib/R/site-library/geometries/include" -I"/usr/local/lib/R/site-library/jsonify/include" -I"/usr/local/lib/R/site-library/rapidjsonr/include" -I"/usr/local/lib/R/site-library/Rcpp/include" -I"/usr/local/lib/R/site-library/sfheaders/include" -I"/usr/local/lib/R/site-library/spatialwidget/include" -I../inst/include -fpic -g -O2 -fdebug-prefix-map=/build/r-base-jbaK_j/r-base-3.6.3=. -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c point.cpp -o point.o
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/tmp/ccj1hTMJ.s: Assembler messages:
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/tmp/ccj1hTMJ.s: Fatal error: can't close point.o: No space left on device
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/tmp/ccJov3g3.s: Assembler messages:
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/tmp/ccJov3g3.s: Fatal error: can't close point.o: No space left on device
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make: *** [/usr/lib/R/etc/Makeconf:177: point.o] Error 1
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ERROR: compilation failed for package ‘mapdeck’
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* removing ‘/tmp/workdir/mapdeck/old/mapdeck.Rcheck/mapdeck’
@@ -720,7 +720,7 @@ Run `cloud_details(, "NA")` for more info
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* URL: https://github.com/ropensci/osmplotr
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* BugReports: https://github.com/ropensci/osmplotr/issues
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* Date/Publication: 2018-12-19 13:40:03 UTC
723-
* Number of recursive dependencies: 120
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* Number of recursive dependencies: 119
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Run `cloud_details(, "osmplotr")` for more info
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ERROR: lazy loading failed for package ‘precautionary’
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* removing ‘/tmp/workdir/precautionary/old/precautionary.Rcheck/precautionary’
945945

946+
```
947+
# psychonetrics
948+
949+
<details>
950+
951+
* Version: 0.8
952+
* Source code: https://github.com/cran/psychonetrics
953+
* URL: http://psychonetrics.org/
954+
* BugReports: https://github.com/SachaEpskamp/psychonetrics/issues
955+
* Date/Publication: 2020-10-26 21:50:03 UTC
956+
* Number of recursive dependencies: 159
957+
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Run `cloud_details(, "psychonetrics")` for more info
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</details>
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## Error before installation
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964+
### Devel
965+
966+
```
967+
* using log directory ‘/tmp/workdir/psychonetrics/new/psychonetrics.Rcheck’
968+
* using R version 3.6.3 (2020-02-29)
969+
* using platform: x86_64-pc-linux-gnu (64-bit)
970+
* using session charset: UTF-8
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* using options ‘--no-manual --no-build-vignettes’
972+
* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
973+
* checking extension type ... Package
974+
* this is package ‘psychonetrics’ version ‘0.8’
975+
* checking package namespace information ... OK
976+
* checking package dependencies ... ERROR
977+
Package suggested but not available: ‘metaSEM’
978+
979+
The suggested packages are required for a complete check.
980+
Checking can be attempted without them by setting the environment
981+
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
982+
983+
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
984+
manual.
985+
* DONE
986+
Status: 1 ERROR
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988+
989+
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991+
992+
993+
```
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### CRAN
995+
996+
```
997+
* using log directory ‘/tmp/workdir/psychonetrics/old/psychonetrics.Rcheck’
998+
* using R version 3.6.3 (2020-02-29)
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* using platform: x86_64-pc-linux-gnu (64-bit)
1000+
* using session charset: UTF-8
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* using options ‘--no-manual --no-build-vignettes’
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* checking for file ‘psychonetrics/DESCRIPTION’ ... OK
1003+
* checking extension type ... Package
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* this is package ‘psychonetrics’ version ‘0.8’
1005+
* checking package namespace information ... OK
1006+
* checking package dependencies ... ERROR
1007+
Package suggested but not available: ‘metaSEM’
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The suggested packages are required for a complete check.
1010+
Checking can be attempted without them by setting the environment
1011+
variable _R_CHECK_FORCE_SUGGESTS_ to a false value.
1012+
1013+
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
1014+
manual.
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* DONE
1016+
Status: 1 ERROR
1017+
1018+
1019+
1020+
1021+
1022+
9461023
```
9471024
# NA
9481025
@@ -1056,7 +1133,7 @@ Status: 1 ERROR
10561133
* URL: https://github.com/yonicd/ripe
10571134
* BugReports: https://github.com/yonicd/ripe/issues
10581135
* Date/Publication: 2019-12-06 10:10:02 UTC
1059-
* Number of recursive dependencies: 59
1136+
* Number of recursive dependencies: 58
10601137
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Run `cloud_details(, "ripe")` for more info
10621139
@@ -1253,7 +1330,7 @@ Status: 1 ERROR
12531330
* Source code: https://github.com/cran/SMITIDvisu
12541331
* URL: https://informatique-mia.inrae.fr/biosp/anr-smitid-project/, https://gitlab.paca.inrae.fr/SMITID/visu/
12551332
* Date/Publication: 2020-11-05 11:10:02 UTC
1256-
* Number of recursive dependencies: 85
1333+
* Number of recursive dependencies: 84
12571334
12581335
Run `cloud_details(, "SMITIDvisu")` for more info
12591336
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13311408
* Source code: https://github.com/cran/spectralAnalysis
13321409
* URL: http://www.openanalytics.eu
13331410
* Date/Publication: 2018-06-12 14:30:39 UTC
1334-
* Number of recursive dependencies: 118
1411+
* Number of recursive dependencies: 117
13351412
13361413
Run `cloud_details(, "spectralAnalysis")` for more info
13371414
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14001477
* URL: https://torch.mlverse.org/docs, https://github.com/mlverse/torch
14011478
* BugReports: https://github.com/mlverse/torch/issues
14021479
* Date/Publication: 2020-10-20 21:10:02 UTC
1403-
* Number of recursive dependencies: 59
1480+
* Number of recursive dependencies: 58
14041481
14051482
Run `cloud_details(, "torch")` for more info
14061483

‎revdep/problems.md‎

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@@ -41,62 +41,6 @@ Run `cloud_details(, "datamaps")` for more info
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Execution halted
4242
```
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# jqr
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46-
<details>
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48-
* Version: 1.1.0
49-
* Source code: https://github.com/cran/jqr
50-
* URL: https://github.com/ropensci/jqr
51-
* BugReports: https://github.com/ropensci/jqr/issues
52-
* Date/Publication: 2018-10-22 22:20:55 UTC
53-
* Number of recursive dependencies: 54
54-
55-
Run `cloud_details(, "jqr")` for more info
56-
57-
</details>
58-
59-
## Newly broken
60-
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* checking examples ... ERROR
62-
```
63-
Running examples in ‘jqr-Ex.R’ failed
64-
The error most likely occurred in:
65-
66-
> ### Name: combine
67-
> ### Title: Combine json pieces
68-
> ### Aliases: combine
69-
>
70-
> ### ** Examples
71-
>
72-
> x <- '{"foo": 5, "bar": 7}' %>% select(a = .foo)
73-
> combine(x)
74-
Error: Must be class jqson
75-
Execution halted
76-
```
77-
78-
* checking tests ... ERROR
79-
```
80-
Running ‘testthat.R’
81-
Running the tests in ‘tests/testthat.R’ failed.
82-
Last 13 lines of output:
83-
● empty test (1)
84-
85-
══ testthat results ═══════════════════════════════════════════════════════════
86-
FAILURE (test-dsl.R:132:3): maths
87-
FAILURE (test-dsl.R:177:3): construct objects
88-
FAILURE (test-dsl.R:178:3): construct objects
89-
FAILURE (test-dsl.R:187:3): paths
90-
FAILURE (test-dsl.R:190:3): paths
91-
FAILURE (test-dsl.R:192:3): paths
92-
FAILURE (test-dsl.R:202:3): recurse
93-
FAILURE (test-dsl.R:206:3): recurse
94-
95-
[ FAIL 8 | WARN 0 | SKIP 1 | PASS 114 ]
96-
Error: Test failures
97-
Execution halted
98-
```
99-
10044
# rcrtan
10145
10246
<details>
@@ -140,7 +84,7 @@ Run `cloud_details(, "rcrtan")` for more info
14084
* URL: https://reproducible.predictiveecology.org, https://github.com/PredictiveEcology/reproducible
14185
* BugReports: https://github.com/PredictiveEcology/reproducible/issues
14286
* Date/Publication: 2020-08-18 07:20:36 UTC
143-
* Number of recursive dependencies: 106
87+
* Number of recursive dependencies: 105
14488
14589
Run `cloud_details(, "reproducible")` for more info
14690
@@ -205,7 +149,7 @@ Run `cloud_details(, "reproducible")` for more info
205149
* URL: https://github.com/yonicd/ripe
206150
* BugReports: https://github.com/yonicd/ripe/issues
207151
* Date/Publication: 2019-12-06 10:10:02 UTC
208-
* Number of recursive dependencies: 59
152+
* Number of recursive dependencies: 58
209153
210154
Run `cloud_details(, "ripe")` for more info
211155
@@ -257,52 +201,37 @@ ERROR: lazy loading failed for package ‘ripe’
257201
* DONE (ripe)
258202

259203
```
260-
# sketch
204+
# TCIU
261205
262206
<details>
263207
264-
* Version: 1.0.3
265-
* Source code: https://github.com/cran/sketch
266-
* BugReports: https://github.com/kcf-jackson/sketch
267-
* Date/Publication: 2020-10-08 07:40:03 UTC
268-
* Number of recursive dependencies: 66
208+
* Version: 1.1.0
209+
* Source code: https://github.com/cran/TCIU
210+
* URL: https://github.com/SOCR/TCIU, https://spacekime.org, https://tciu.predictive.space
211+
* BugReports: https://github.com/SOCR/TCIU/issues
212+
* Date/Publication: 2020-09-18 12:00:32 UTC
213+
* Number of recursive dependencies: 189
269214
270-
Run `cloud_details(, "sketch")` for more info
215+
Run `cloud_details(, "TCIU")` for more info
271216
272217
</details>
273218
274219
## Newly broken
275220
276-
* checking examples ... ERROR
221+
* checking whether package ‘TCIU’ can be installed ... WARNING
277222
```
278-
Running examples in ‘sketch-Ex.R’ failed
279-
The error most likely occurred in:
280-
281-
> ### Name: compile_r
282-
> ### Title: Compile an R file into a JavaScript file
283-
> ### Aliases: compile_r
284-
>
285-
> ### ** Examples
286-
>
287-
> file <- system.file("test_files/test_source.R", package = "sketch")
288-
> readLines(file)
289-
[1] "console::log(\"'test_source.R' runs successfully.\")"
290-
> compile_r(input = file)
291-
Error: C stack usage 7969652 is too close to the limit
292-
Execution halted
223+
Found the following significant warnings:
224+
Warning: loading Rplot failed
225+
See ‘/tmp/workdir/TCIU/new/TCIU.Rcheck/00install.out’ for details.
293226
```
294227
295-
* checking tests ... ERROR
228+
## In both
229+
230+
* checking installed package size ... NOTE
296231
```
297-
Running ‘testthat.R’
298-
Running the tests in ‘tests/testthat.R’ failed.
299-
Complete output:
300-
> library(testthat)
301-
> library(sketch)
302-
>
303-
> test_check("sketch")
304-
Error: C stack usage 7970324 is too close to the limit
305-
Execution halted
232+
installed size is 12.3Mb
233+
sub-directories of 1Mb or more:
234+
doc 11.2Mb
306235
```
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# tidytidbits
@@ -355,7 +284,7 @@ Run `cloud_details(, "tidytidbits")` for more info
355284
* URL: https://torch.mlverse.org/docs, https://github.com/mlverse/torch
356285
* BugReports: https://github.com/mlverse/torch/issues
357286
* Date/Publication: 2020-10-20 21:10:02 UTC
358-
* Number of recursive dependencies: 59
287+
* Number of recursive dependencies: 58
359288
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Run `cloud_details(, "torch")` for more info
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