Remove [extra] dependency group - install manually as requested

Co-authored-by: toruseo <[email protected]>

Author: Copilot

.github/workflows/measure-coverage.yml

@@ -21,7 +21,11 @@ jobs:
     - name: Install uxsim and dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install -e .[dev,advanced,extra]
+        pip install -e .[dev,advanced]
+    - name: Install pytest other dependencies
+      run: |
+        # Install testing dependencies with compatible versions for parallel execution
+        pip install osmnx requests
     - name: Run verifications with pytest
       run: pytest -n auto tests/test_verification_straight_road.py tests/test_verification_route_choice.py tests/test_verification_node.py tests/test_verification_exceptional.py tests/test_verification_sioux_falls.py tests/test_verification_multilane.py tests/test_verification_taxi.py tests/test_verification_dta_solvers.py tests/test_other_functions.py tests/test_optional_functions_python313.py --durations=0 -v --cov=uxsim --cov-report=xml --cov-config=.github/.coveragerc
     - name: Upload coverage reports to Codecov

.github/workflows/run-examples.yml

@@ -22,6 +22,10 @@ jobs:
     - name: Install uxsim and dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install .[dev,advanced,extra]
+        pip install .[dev]
+    - name: Install pytest other dependencies
+      run: |
+        # Install testing dependencies with compatible versions for parallel execution
+        pip install gymnasium torch osmnx deap streamlit
     - name: Run examples with pytest
       run: pytest -n auto tests/test_examples.py --durations=0 -v

.github/workflows/run-notebook-demos-extra.yml

@@ -21,6 +21,7 @@ jobs:
     - name: Install dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install .[dev,advanced,extra]
+        pip install .[dev]
+        pip install gymnasium torch osmnx deap
     - name: Run tests
       run: pytest tests/test_notebook_demos_extra.py --durations=0 -s -v

.github/workflows/test-functions-python313.yml

@@ -19,7 +19,11 @@ jobs:
     - name: Install uxsim and dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install .[dev,advanced,extra]
+        pip install .[dev,advanced]
+    - name: Install pytest other dependencies
+      run: |
+        # Install testing dependencies with compatible versions for parallel execution
+        pip install requests
     - name: Run tests with pytest
       run: pytest -n auto tests/test_optional_functions_python313.py --durations=0 -v
 

.github/workflows/test-functions.yml

@@ -19,7 +19,11 @@ jobs:
     - name: Install uxsim and dependencies
       run: |
         python -m pip install --upgrade pip
-        pip install .[dev,advanced,extra]
+        pip install .[dev]
+    - name: Install pytest other dependencies
+      run: |
+        # Install testing dependencies with compatible versions for parallel execution
+        pip install osmnx requests
     - name: Run tests with pytest
       run: pytest -n auto tests/test_other_functions.py --durations=0 -v
 

pyproject.toml

@@ -49,13 +49,6 @@ dev = [
     "jupyter",
     "nbformat"
 ]
-extra = [
-    "gymnasium",
-    "torch",
-    "deap",
-    "streamlit",
-    "requests"
-]
 
 [project.urls]
 Homepage = "https://github.com/toruseo/UXsim"

tests/README.md

@@ -13,19 +13,14 @@ If a user would like to run these tests locally for development purposes, first
 pip install .[dev]
 ```
 
-For tests that require additional optional packages (e.g., `torch`, `gymnasium`, `deap`, `streamlit`), install the extra dependencies:
-```bash
-pip install .[dev,extra]
-```
-
 For tests that require advanced features (e.g., `osmnx`, `geopandas`, `shapely`, `neatnet`), install the advanced dependencies:
 ```bash
 pip install .[dev,advanced]
 ```
 
-For tests that require all optional features:
+For tests that require additional optional packages (e.g., `torch`, `gymnasium`, `deap`, `streamlit`), install them manually:
 ```bash
-pip install .[dev,advanced,extra]
+pip install torch gymnasium deap streamlit requests
 ```
 
 Then run the tests: