msprime/prek.toml at main · tskit-dev/msprime · GitHub

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# The prek configuration defining linting requirements. This
# setup is optimised for long-term stability and determinism,
# and therefore only uses either "builtin" rules or "local"
# rules implementing lint workflows.  We do not use any remote
# workflow repos.

files = { glob = [
    "msprime/**",
    "benchmarks/**",
    "tests/**",
    "*.toml",
    "docs/**",
    "lib/*.[c,h]",
    "lib/tests/*.[c,h]",
]}

exclude = { glob = ["lib/avl.*", "lib/subprojects/**"]}

[[repos]]
repo = "builtin"
hooks = [
    # { id = "trailing-whitespace" },
    # { id = "end-of-file-fixer" },
    { id = "check-added-large-files" },
    { id = "check-merge-conflict" },
    { id = "mixed-line-ending" },
    { id = "check-case-conflict" },
    { id = "check-yaml" },
    { id = "check-toml" },
]

[[repos]]
repo = "local"
hooks = [
  {
    id = "ruff-check",
    name = "ruff check",
    language = "system",
    entry = "uv run --only-group=lint ruff check --fix --force-exclude",
    types = ["python"],
  },
]

[[repos]]
repo = "local"
hooks = [
  {
    id = "ruff-format",
    name = "ruff format",
    language = "system",
    entry = "uv run --only-group=lint ruff format --force-exclude",
    types = ["python"],
  },
]

[[repos]]
repo = "local"
hooks = [
  {
    id = "clang-format",
    name = "clang-format",
    language = "system",
    entry = "uv run --only-group=lint clang-format -i",
    types = ["c"],
    verbose = true,
  },
]