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lines changed Original file line number Diff line number Diff line change @@ -20,7 +20,8 @@ citation_url: https://tskit.dev/tsinfer/docs/stable/CITATION.html
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citation_md : https://raw.githubusercontent.com/tskit-dev/tsinfer/refs/heads/main/CITATION.md
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---
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- `` Tsinfer `` is a Python package to infer a tree sequence from large
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- quantities of phased DNA sequence data, for example in a VCF file
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- (see the [ tutorial] ( https://tsinfer.readthedocs.io/en/latest/tutorial.html#reading-a-vcf )
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- for how to convert data from a VCF into a suitable input format).
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+ `` Tsinfer `` is a Python package to infer an ARG in tree sequence format
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+ from large quantities of phased DNA sequence data in
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+ [ VCF Zarr] ( https://github.com/sgkit-dev/vcf-zarr-spec/blob/main/vcf_zarr_spec.md ) format
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+ (see the [ usage documentation] ( https://tskit.dev/tsinfer/docs/stable/usage.html#data-example )
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+ for how to convert data from a VCF into a suitable input format).
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