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Copy file name to clipboardExpand all lines: docs/database-setup.md
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We use Flyway to patch our database. This script should be run if new database patches are issued, or repeatable migrations are added/eddited (eg new stored procedures).
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1.Alter the `Database/Migrations/migrate.ps1` script to configure your database address, database name, username and password.
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2.Run `Database/Migrations/migrate.ps1`. This script will patch the database using [Flyway](https://flywaydb.org/) to the latest version. It can be run many times.
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1.Clone the repository `git clone https://github.com/answerdigital/oxford-omop-data-mapper.git`
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2.Patch the database using the following guide [https://github.com/answerdigital/oxford-omop-data-mapper/tree/main/Database/Migrations](https://github.com/answerdigital/oxford-omop-data-mapper/tree/main/Database/Migrations)
Copy file name to clipboardExpand all lines: docs/quick-start.md
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In this guide we will transform a SUS outpatient CSV file to OMOP.
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This tool supports the following format [SUS_SEM_Extract_Specification](https://digital.nhs.uk/binaries/content/assets/website-assets/services/sus/sus-guidance/sem_extract_specification-v-1.3.xlsx).
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This data can be requested in bulk for your trust via the [SUS+ Portal](https://digital.nhs.uk/services/secondary-uses-service-sus/sus-portal-user-guide).
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## Prerequisites
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* OMOP Database [Setup guide]({% link docs/database-setup.md %})
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* Docker [Quick start](https://www.docker.com/get-started/) (or .NET if run natively)
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* The OMOP database [Database Setup Guide]({% link docs/database-setup.md %})
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