Fix Rust protocol failing to build in Cargo after an IDE sync (#174)

## What is the goal of this PR?

We fixed an issue where the Rust protocol would fail to build in Cargo
after an IDE sync (by bumping `vaticle_dependencies`)

## What are the changes implemented in this PR?

The fix is in:
- typedb/typedb-dependencies#400

Summary: The `typedb-protocol` crate depends heavily on generated
sources (a Rust gRPC + Proto library). The Rust IDE sync tool would
generate these sources if run in the `typedb-protocol` repo itself, but
not if run from a different repo that depended on Protocol. We fixed
that.

Author: alexjpwalker

.factory/automation.yml

@@ -31,13 +31,17 @@ build:
         bazel run @vaticle_dependencies//factory/analysis:dependency-analysis
   correctness:
     build:
+      # TODO: use default machine once we delete the non-Rust protocols
+      machine: 4-core-16-gb
       image: vaticle-ubuntu-22.04
       #NPM packages can't be built under RBE
       command: |
         bazel build //...
         bazel run @vaticle_dependencies//tool/checkstyle:test-coverage
         bazel test $(bazel query 'kind(checkstyle_test, //...)') --test_output=errors
     build-dependency:
+      # TODO: use default machine once we delete the non-Rust protocols
+      machine: 4-core-16-gb
       image: vaticle-ubuntu-22.04
       command: |
         dependencies/maven/update.sh

dependencies/vaticle/repositories.bzl

@@ -21,5 +21,5 @@ def vaticle_dependencies():
     git_repository(
         name = "vaticle_dependencies",
         remote = "https://github.com/vaticle/dependencies",
-        commit = "ef99eda281717dafcb835cf924e4c673f46d7217", # sync-marker: do not remove this comment, this is used for sync-dependencies by @vaticle_dependencies
+        commit = "16b46048ef215bdd162b2d734a04ad9b6d1545e2", # sync-marker: do not remove this comment, this is used for sync-dependencies by @vaticle_dependencies
     )