Merge pull request #63 from uc-cdis/feat/metrics

]chore(cleanup): make deps less strict, relock, add GH actions

Author: Avantol13

.github/workflows/ci.yml

@@ -0,0 +1,25 @@
+# push will run on every pushed commit to any branch (so this will rerun the tests
+# once a branch gets merged to main in addition to any new commits on any branch)
+on: push
+
+name: CI
+
+concurrency:
+  group: '${{ github.workflow }} @ ${{ github.event.pull_request.head.label || github.head_ref || github.ref }}'
+  cancel-in-progress: true
+
+jobs:
+  Security:
+    name: Security Pipeline
+    uses: uc-cdis/.github/.github/workflows/securitypipeline.yaml@master
+    with:
+       python-poetry: 'true'
+    secrets: inherit
+
+  UnitTest:
+    name: Python Unit Test with Postgres
+    uses: uc-cdis/.github/.github/workflows/python_unit_test.yaml@master
+    with:
+       test-script: 'test/ci_commands_script.sh'
+       python-version: '3.9'
+       use-cache: true

.github/workflows/pypi.yml

@@ -0,0 +1,16 @@
+name: PyPI
+on:
+  push:
+    tags:
+      - '*'
+jobs:
+  PyPIPoetryPublish:
+    name: PyPI Poetry Publish
+    uses: uc-cdis/.github/.github/workflows/python_package_index_publish.yaml@master
+    with:
+        PYTHON_VERSION: '3.9'
+        # This will attempt push to test PyPI first and only push to prod if it works
+        DO_TEST_PUBLISH_FIRST: true
+    secrets:
+      PYPI_TEST_API_TOKEN: ${{ secrets.PYPI_TEST_API_TOKEN }}
+      PYPI_PROD_API_TOKEN: ${{ secrets.PYPI_PROD_API_TOKEN }}