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lines changed Original file line number Diff line number Diff line change @@ -55,38 +55,51 @@ uniqueKeys:
5555
5656properties :
5757 $ref : " _definitions.yaml#/data_file_properties"
58- type :
59- enum : [ "submitted_unaligned_reads" ]
58+
6059 data_category :
6160 term :
6261 $ref : " _terms.yaml#/data_category"
6362 enum :
64- - Sequencing Data
65- - Sequencing Reads
66- - Raw Sequencing Data
63+ - " Sequencing Data"
64+ - " Sequencing Reads"
65+ - " Raw Sequencing Data"
66+
6767 data_type :
6868 term :
6969 $ref : " _terms.yaml#/data_type"
7070 enum : [ "Unaligned Reads" ]
71+
7172 data_format :
7273 term :
7374 $ref : " _terms.yaml#/data_format"
7475 enum :
75- - BAM
76- - FASTQ
76+ - " BAM"
77+ - " FASTQ"
78+ - " FASTA"
79+
7780 experimental_strategy :
7881 term :
7982 $ref : " _terms.yaml#/experimental_strategy"
8083 enum :
81- - WGS
82- - WXS
83- - Low Pass WGS
84- - Validation
85- - RNA-Seq
86- - miRNA-Seq
87- - Total RNA-Seq
88- - DNA Panel
84+ - " ATAC-Seq"
85+ - " Bisulfite-Seq"
86+ - " ChIP-Seq"
87+ - " Low Pass WGS"
88+ - " miRNA-Seq"
89+ - " RNA-Seq"
90+ - " Targeted Sequencing"
91+ - " WGS"
92+ - " WXS"
93+
94+ read_pair_number :
95+ term :
96+ $ref : " _terms.yaml#/read_pair_number"
97+ enum :
98+ - " R1"
99+ - " R2"
100+
89101 read_groups :
90102 $ref : " _definitions.yaml#/to_one"
103+
91104 core_metadata_collections :
92- $ref : " _definitions.yaml#/to_many "
105+ $ref : " _definitions.yaml#/to_one "
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