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.github/ISSUE_TEMPLATE/general.yml

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This issue will be added to the backlog of our project board. If you would like to take it on, please assign it to yourself!
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All issues need to have someone assigned to/owning them in order to progress. Whilst this is not the case we'll keep the issue safe in the backlog!
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- type: textarea
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id: detail
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attributes:
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label: Detail
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description: Please explain your issue in detail
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validations:
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required: true
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- type: textarea
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id: actions
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attributes:
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label: Actions
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description: Please add any actions to be undertaken below. You can create a checklist by typing `- [ ] x` for each action point
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validations:
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required: true
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- type: textarea
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id: tags
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attributes:

README.md

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Anyone can join our mailing list and attend our meetings, you do not need to provide any information other than your email address.
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:Mailing list: https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=RSE-TRE-COMM&A=1
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:Mailing list: https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=UK-TRE-COMM&A=1
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:Slack channel: https://ukrse.slack.com/archives/C045ETUPPD0
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# :family: Community and Support

docs/Makefile

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# You can set these variables from the command line, and also
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# from the environment for the first two.
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SPHINXOPTS ?=
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SPHINXOPTS ?= -W
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SPHINXBUILD ?= sphinx-build
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SOURCEDIR = .
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BUILDDIR = _build

docs/_templates/footer-links.html

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<a href="https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=RSE-TRE-COMM&A=1"
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<a href="https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=UK-TRE-COMM&A=1"
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><i class="fa-solid fa-envelope"></i> Mailing list</a
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><br />
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<a href="https://ukrse.slack.com/archives/C045ETUPPD0"

docs/background/index.md

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Anyone can join our mailing list and attend our meetings, you do not need to provide any information other than your email address.
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:Mailing list: https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=RSE-TRE-COMM&A=1
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:Mailing list: https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?SUBED1=UK-TRE-COMM&A=1
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:Slack channel: https://ukrse.slack.com/archives/C045ETUPPD0

docs/conf.py

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myst_enable_extensions = ["fieldlist", "linkify"]
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myst_linkify_fuzzy_links = False
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# Automatically create anchors for in-page headings up to level 3
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myst_heading_anchors = 4
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# -- Options for HTML output -------------------------------------------------
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# https://www.sphinx-doc.org/en/master/usage/configuration.html#options-for-html-output
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}
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# -- Link checker configuration
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# https://www.swansea.ac.uk/the-university/location/#bay-campus=is-expanded
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# is a JavaScript only anchor
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linkcheck_anchors_ignore = ["bay-campus=is-expanded"]
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linkcheck_ignore = [
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# GitHub CI linkchecker seems to be blocked
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r"https://www.turing.ac.uk/.*",
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r"https://www.hpe.com/.*",
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r"https://csrc.nist.gov/.*",
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]
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# These pages use in-page JavaScript anchors which aren't seen by the link checker
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linkcheck_anchors_ignore_for_url = [
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r"https://www\.swansea\.ac\.uk/the-university/location/",
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r"https://arewemeetingyet\.com/.+",
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]

docs/events/index.md

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# Events
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```{raw} html
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<iframe
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src="https://teamup.com/ksbqmbhymxdbu454aw?view=mw8&showLogo=0&showProfileAndInfo=0&showSidepanel=1&disableSidepanel=1&showMenu=1&showAgendaHeader=1&showAgendaDetails=0&showYearViewHeader=1"
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style="width: 100%; height: 800px; border: 1px solid #cccccc"
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loading="lazy"
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frameborder="0">
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</iframe>
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<div style="text-align:right"><a href="https://teamup.com/ksbqmbhymxdbu454aw" target="_blank">Open in new window</a></div>
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```
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You can subscribe to the calendar, e.g. in Outlook or Google Calendar, by importing [this ICS link](https://ics.teamup.com/feed/ksbqmbhymxdbu454aw/0.ics) to your calendar.
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You can also subscribe to a subset of events:
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- [Official events](https://ics.teamup.com/feed/ksbqmbhymxdbu454aw/13011531.ics)
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- [Other TRE events](https://ics.teamup.com/feed/ksbqmbhymxdbu454aw/13011530.ics)
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- [WG - Community management](https://ics.teamup.com/feed/ksbqmbhymxdbu454aw/13014371.ics)
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- [Working groups](https://ics.teamup.com/feed/ksbqmbhymxdbu454aw/13014372.ics)
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Here you'll find events the community is organising and engaged in. You can also find reports on past events hosted by the community, as well as a schedule of upcoming events and information on how to get involved.
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```{toctree}
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:maxdepth: 2
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wg_workshops/index
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```
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Here you'll find events the community is organising and engaged in. You can also find reports on past events hosted by the community, as well as a schedule of upcoming events and information on how to get involved.

docs/events/wg_workshops/2023-03-29-march-meeting/index.md

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- [Alan Turing Institute](https://arxiv.org/pdf/1908.08737.pdf)
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- Sheffield used this as the basis of their system for assessing risk.
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- [NIST RMF](https://csrc.nist.gov/projects/risk-management/about-rmf)
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- [NCSC](https://www.ncsc.gov.uk/collection/risk-management)
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- [Harvard DataTags](https://github.com/IQSS/DataTaggingLibrary)
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- [UK Data Service data types](https://ukdataservice.ac.uk/help/access-policy/types-of-data-access/)

docs/events/wg_workshops/2023-03-29-march-meeting/project-systematic-data-risk-classification.md

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- 3 - weak pseudo
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- 4 - public
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- Dropping down tiers, things become easier. Turing paper on this - Sheffield used this as the basis of their system for assessing risk.
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- https://zenodo.org/record/7754459
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- [Alan Turing Institute paper](https://arxiv.org/pdf/1908.08737.pdf)
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- Importance of agreed risk classification with federation, and agreement on risk appetite
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- [NIST RMF](https://csrc.nist.gov/projects/risk-management/about-rmf)
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# Current state of the art re data linkage/federation/AI&ML&LLM across infrastructures: federation, governance, safe output methods
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## Overview
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### Summary
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Issues about federation of datasets were discussed, including identifying different datasets across multiple systems, how to collect identifiable information robustly, and how we can link up different approaches across the 4 nations effectively.
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There was further discussion on how to effectively check ML models within TREs.
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In the case of governance, it was suggested that a project working across multiple TREs should have one singular governance process.
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### Next steps
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- Create a 'panel' focused on specific type of data/research (e.g. health, crime, financial) who can oversee specific research projects within these fields
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## Raw notes
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### Data Linkage
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#### How do you go about the NHS Number?
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- Uses NHS Standard NF5, after 3 they went to manual to track through the system.
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- Issues with health and non-health data
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#### Names such as Dave / David can cause problems.
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- Linksmart is a solution for this.
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- Collecting Crime Data
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#### Scotland's Approach
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- a national ID number
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### Federation between datasets
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- Identifying with confidence across TREs is important
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- Problem: Linking health with something else is problematic to match up and link it with addresses and names
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- Separation functions
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- Person has all the identifying information, but they do not have the data
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- TREs communications between each other need specific criteria, Scotland has 5 TREs
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- Having more than two, and introducing a central one is a possibility
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- Issues with identifying A-B data sets across multiple systems
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- Seeding Death Data -- David and Debra Smith: D. Smith & D. Smith causes gender incompatibility issues
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- National Drug Treatment Data -- At source they only collected initials 'D.S.', Gender and MM/YYYY of DOB. Deidentifying can cause linking problems. Education to non-education where they don't have their common 'number' -- how confident can we be that Participant A is the same participant in another TRE? If you're not sharing names & addresses
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- Bringing in NHS data and also pseudo anonymise it -- how can you work with it without a key?
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- Once you got a data linkage -- bringing the different data types into a data set (TRE). E.g. Linking mental health data and shopping data, if you anonymise that and have their own key -- they can do it anonymously for external sources
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- Education data between England, Scotland and Wales might use different notations
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- Residential Data can be used as a key
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- 'E-child' trying to link the NHS with the Department of Education
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### AI & ML
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- People misunderstand the terms AI & ML with 'Statistical Modeling'
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- Based on risk factors you can determine 70% precision pre-diabetic chance
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- Accessing 'clinical like data' with similar terminology to mimic clinic systems
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- AI -- Offline AI: you can have an offline machine learning model -- yes
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- Would multiple AIs learn the same thing on same data sets? -- no
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- You can make it work with a shared API though (Stroke Predicition)
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- APRs -- 8-9 expensive centre
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- Different type of interpretation of ML, ML data on health 'takes your job', ML data on other scenarios might be socially acceptable
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- Pattern finding models are popular and precise, this is lacking in statistical modeling
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- At the end of the day, medical data ML is not understood why it gives that result
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- Checking models are problematic and difficult, unsure results and unsure contents of the model begs the question of the model's authenticity
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### Governance
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- Process is repeated a lot, no committee talks to each other and are a separate entity
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- Cannot start work unless approved
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- Doing a project between TREs, each TRE will have an approval process, ideally a multi TRE Project requires a single approval process, this decision should be approved across the other one
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#### What would a solution to this problem look like?
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- Current state of the art is the overarching question -- needs a TRE panel to decide what is state of the art
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- Single 'panel' on a specialty (e.g. health, crime) who deal with specific projects, additionally members of the national TRE supervision

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