Merge pull request #18 from uw-it-aca/pm_fix-rstudio-gdal-issue

fixed GDAL install issue, installed fastR2

Author: paulkm

rstudio/Dockerfile

@@ -4,14 +4,14 @@ FROM $BASE_CONTAINER
 # Base notebook for 1.4.2 uses Ubuntu 20.04 (Focal)
 
 RUN pip install jupyter-rsession-proxy
-RUN conda install -y -c r r-tidyverse
+RUN conda install -y -c r r-tidyverse gdal
 
 # install rstudio-server
 USER root
 
 # Per: http://cran.rstudio.com/bin/linux/ubuntu/
 RUN apt-get update && \
-    apt-get install gdebi-core -y && \
+    apt-get install gdebi-core libproj-dev proj-data proj-bin libgeos-dev build-essential -y && \    
     curl --silent -L --fail https://download2.rstudio.org/server/bionic/amd64/rstudio-server-2021.09.1-372-amd64.deb > /tmp/rstudio.deb && \
     echo 'c58df09468870b89f1796445853dce2dacaa0fc5b7bb1f92b036fa8da1d1f8a3  /tmp/rstudio.deb' | shasum -a 256 -c - && \
     apt-get install -y /tmp/rstudio.deb && \
@@ -33,7 +33,7 @@ RUN pip install nbgitpuller && \
 
 # See: https://github.com/uw-it-aca/rttl-notebooks/pull/15
 RUN R -e "devtools::install_github('IRkernel/repr', ref = 'master')"
-RUN R -e "install.packages('IRkernel',repos='http://cran.us.r-project.org')"
+RUN R -e "install.packages(c('IRkernel', 'fastR2'),repos='http://cran.us.r-project.org')"
 RUN R -e "IRkernel::installspec()"
 
 ENV RSESSION_PROXY_RSTUDIO_1_4=yes