Updates to the hugo theme.

Author: vaqm2

.gitmodules

@@ -1,3 +1,6 @@
 [submodule "themes/ananke"]
 	path = themes/ananke
 	url = https://github.com/theNewDynamic/gohugo-theme-ananke.git
+[submodule "themes/hello-friend-ng"]
+	path = themes/hello-friend-ng
+	url = https://github.com/rhazdon/hugo-theme-hello-friend-ng.git

static/Imputations.png .hugo_build.lockstatic/Imputations.png renamed to .hugo_build.lock

@@ -1,23 +1,45 @@
 baseURL = 'https://vaqm2.github.io/'
 languageCode = 'en-us'
 title = 'Vivek Appadurai'
-theme = 'ananke'
+theme = 'hello-friend-ng'
+
+PygmentsCodeFences = true
+PygmentsStyle = "monokai"
 
 [params]
-  # Ananke theme specific parameters
-  # You can find more options in the theme's documentation
-  # https://github.com/theNewDynamic/gohugo-theme-ananke
+  homeSubtitle = "Bioinformatician | Software Developer | Data Tinkerer"
+
+  # Social icons
+  [[params.social]]
+    name = "github"
+    url  = "https://github.com/vaqm2"
+
+  [[params.social]]
+    name = "linkedin"
+    url  = "https://www.linkedin.com/in/vivek-appadurai-54a622192/"
+
+  [[params.social]]
+    name = "googlescholar"
+    url  = "https://scholar.google.com/citations?user=sUD1UocAAAAJ&hl=en&oi=ao"
 
 [menu]
   [[menu.main]]
-    name = "Home"
-    url = "/"
-    weight = 10
+    identifier = "home"
+    name       = "Home"
+    url        = "/"
+    weight     = 10
   [[menu.main]]
-    name = "Resume"
-    url = "/resume/"
-    weight = 20
+    identifier = "resume"
+    name       = "Resume"
+    url        = "/resume/"
+    weight     = 20
   [[menu.main]]
-    name = "Publications"
-    url = "/publications/"
-    weight = 30
+    identifier = "publications"
+    name       = "Publications"
+    url        = "/publications/"
+    weight     = 30
+
+[markup]
+  [markup.goldmark]
+    [markup.goldmark.renderer]
+      unsafe = true

config.toml

@@ -4,10 +4,4 @@ date: 2025-08-10T12:00:00+02:00
 draft: false
 ---
 
-I'm a bioinformatician living in Copenhagen's awesome Vesterbro neighborhood. I spend my days building the data plumbing for huge biobanks that help us understand complex diseases. I'm obsessed with squashing batch effects, making smart guesses for missing data, and making sure our genetic studies are on the level. My biggest project so far is iPSYCH, a massive Danish biobank with data from 150,000 people, all to help us understand mental health better.
-
-For the last couple of years, I've been a Senior Technical Data Steward at Novo Nordisk, where I'm on a mission to make our experimental data FAIR and ready for AI and machine learning. I build cloud-native apps using microservices, sprinkle in some natural language processing, and use fancy ontologies to make sure our data products play nicely with each other.
-
-I also got to help modernize our compound database, which was a blast. I built logical data models for everything from old-school molecules to the latest and greatest in R&D.
-
-When I'm not wrangling data, you can find me running or hanging out with my amazing 1-year-old daughter, Meenakshi.
+Bioinformatician | Software Developer | Data Tinkerer

content/_index.md

@@ -2,6 +2,8 @@
 title: "Publications"
 date: 2025-08-10T12:00:00+02:00
 draft: false
+layout: "publications"
+type: "publications"
 ---
 
-This page will list my publications.
+A list of selected publications.

content/publications/_index.md

@@ -4,6 +4,8 @@ date: 2025-08-10T12:00:00+02:00
 draft: false
 ---
 
+<a href="/VivekAppaduraiCV.pdf" target="_blank" rel="noopener">Download CV</a>
+
 ## Professional Summary
 
 I'm a bioinformatics professional with over 12 years of experience in pharmaceutical research, clinical science and academic settings, specializing in the development, modernization, and support of scientific software solutions and informatics processes. I possess proven expertise in Python, SQL, automating workflows, using high performance, cloud computing platforms, and contributing to AI/ML-enabled drug discovery initiatives. I'm adept at bridging scientific research needs with technical execution, driving data automation, and optimizing underlying databases. In addition, I have demonstrated strong problem-solving, collaboration and communication skills, learning agility, along with a commitment to delivering user-friendly, research-centric solutions within dynamic software ecosystems.
@@ -67,4 +69,4 @@ Apr 2022
 
 ## Extracurricular
 
-I'm an avid runner (PRs 10k: 46.01, 5k: 22:30) and I enjoy reading neo-western, classical American, Russian literature when I'm not spending time with my soon to be one-year old daughter. Prior to becoming a dad, I volunteered with the coding pirates branch in Østerbro, teaching programming skills in Python and Javascript to teenagers.
+I'm an avid runner (PRs 10k: 46.01, 5k: 22:30) and I enjoy reading neo-western, classical American, Russian literature when I'm not spending time with my soon to be one-year old daughter. Prior to becoming a dad, I volunteered with the coding pirates branch in Østerbro, teaching programming skills in Python and Javascript to teenagers.

content/resume.md

@@ -0,0 +1,3 @@
+<footer class="footer">
+    <p class="copyright">Vibe coded with <a href="https://github.com/google-gemini/gemini-cli" target="_blank" rel="noopener">gemini-cli</a></p>
+</footer>

layouts/_default/list.html

@@ -0,0 +1,3 @@
+{{ range . -}}
+    &nbsp; <a href="{{ .url }}" target="_blank" rel="noopener" title="{{ .name | humanize }}">{{ partial "svg.html" . }}</a> &nbsp;
+{{- end -}}