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33 | 33 |
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34 | 34 | * `anova` and `permutest` for partial RDA, dbRDA _etc._ residualize |
35 | 35 | constraints similarly as partial CCA has done since **vegan** |
36 | | - release 2.6-6. This may have an effect in partial models with |
| 36 | + release 2.6-6. This has an effect in partial models with |
37 | 37 | `Condition`term. |
38 | 38 |
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39 | 39 | * `add1` for constrained ordination no longer bases permutation tests |
40 | | - on partial model, but uses method that is consistent with |
41 | | - permutation tests in `drop1`. In `ordistep` the _P_-value of the |
42 | | - last added term is unchanged when it is considered for dropping |
43 | | - using same permutations. |
| 40 | + on partial model, but uses method that is consistent with marginal |
| 41 | + tests in `drop1`. In `ordistep` the _P_-value of the last added term |
| 42 | + is unchanged when it is considered for dropping using same |
| 43 | + permutations. |
44 | 44 |
|
45 | 45 | * `anova.cca(..., by = "axis")` is no longer based on partial |
46 | | - ordination but is consistent with other `by` cases. This may have an |
| 46 | + ordination but is consistent with other `by` cases. This has an |
47 | 47 | effect on later non-significant axes, but does not influence the |
48 | 48 | _P_-value of the first axis. |
49 | 49 |
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75 | 75 |
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76 | 76 | * `anova` and `permutest` with arguments `by = "terms"` or `by = |
77 | 77 | "onedf"` was wrong in partial CCA. There were no problems in normal |
78 | | - CCA without `Condition`term, other [partial] constrained ordination |
| 78 | + CCA without `Condition` term, other [partial] constrained ordination |
79 | 79 | methods or with other `by` arguments. The bug was introduces in |
80 | 80 | **vegan** release 2.6-6. |
81 | 81 |
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