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prepare pyvcell for broader use #228

prepare pyvcell for broader use

prepare pyvcell for broader use #228

Workflow file for this run

name: Main
on:
push:
branches:
- main
pull_request:
types: [opened, synchronize, reopened, ready_for_review]
jobs:
colab_compat:
runs-on: ubuntu-22.04 # match Colab's os
steps:
- name: Check out
uses: actions/checkout@v4
- name: Set up Python
uses: actions/setup-python@v5
with:
python-version: 3.11 # match Colab's Python version
- name: Install Poetry # don't cache dependencies which may affect test results
run: |
curl -sSL https://install.python-poetry.org | python - -y
echo "$HOME/.local/bin" >> $GITHUB_PATH
poetry config virtualenvs.in-project true
- name: Create virtual environment and install Colab dependencies
run: |
pip install --upgrade pip
python -m venv .venv
source .venv/bin/activate
pip install --only-binary=:all: --use-feature=fast-deps -r colab_dependencies.txt
- name: Install project with Poetry
run: |
source .venv/bin/activate
poetry install --no-interaction --no-root --no-dev
- name: Run Colab tests
run: |
source .venv/bin/activate
pytest tests --cov --cov-config=pyproject.toml --cov-report=xml
# quality:
# runs-on: ubuntu-latest
# steps:
# - name: Check out
# uses: actions/checkout@v4
#
# - uses: actions/cache@v4
# with:
# path: ~/.cache/pre-commit
# key: pre-commit-${{ hashFiles('.pre-commit-config.yaml') }}
#
# - name: Set up the environment
# uses: ./.github/actions/setup-poetry-env
#
# - name: Run checks
# run: make check
#
# tests-and-type-check:
# runs-on: ubuntu-latest
# strategy:
# matrix:
# python-version: ["3.9", "3.10", "3.11", "3.12"]
# fail-fast: false
# defaults:
# run:
# shell: bash
# steps:
# - name: Check out
# uses: actions/checkout@v4
#
# - name: Set up the environment
# uses: ./.github/actions/setup-poetry-env
# with:
# python-version: ${{ matrix.python-version }}
#
# - name: Run tests
# run: poetry run pytest tests --cov --cov-config=pyproject.toml --cov-report=xml
#
# - name: Check typing
# run: poetry run mypy
#
# - name: Upload coverage reports to Codecov with GitHub Action on Python 3.11
# uses: codecov/codecov-action@v4
# if: ${{ matrix.python-version == '3.11' }}
#
# check-docs:
# runs-on: ubuntu-latest
# steps:
# - name: Check out
# uses: actions/checkout@v4
#
# - name: Set up the environment
# uses: ./.github/actions/setup-poetry-env
#
# - name: Check if documentation can be built
# run: poetry run mkdocs build -s