build_wheels.yml

name: "Build Wheels"

on:
  workflow_dispatch:
  pull_request:
  push:
    branches:
      - master
  release:
    types:
      - published

jobs:
  build_wheels:
    name: Build Python Wheels on ${{ matrix.os }}
    runs-on: ${{ matrix.os }}
    strategy:
      matrix:
        os: [ubuntu-latest, ubuntu-24.04-arm, windows-latest, macos-13, macos-14]
        python_version: ["cp39-*", "cp310-*", "cp311-*", "cp312-*", "cp313-*"]

    steps:
      - name: Checkout repository
        uses: actions/checkout@v4
        with:
          submodules: true

      - name: Install Ubuntu Dependencies
        if: matrix.os == 'ubuntu-latest' || matrix.os == 'ubuntu-24.04-arm'
        run: |
          sudo apt update
          sudo apt install -y wget gfortran cmake ninja-build libboost-all-dev libzip-dev libhdf5-dev libbz2-dev libssl-dev liblzma-dev
          
          # for some reason, there aren't headers included in libzip-dev???? so we're building from source!
          mkdir ../libzip-source
          wget https://libzip.org/download/libzip-1.11.3.tar.gz
          tar -xzvf libzip-1.11.3.tar.gz -C ../libzip-source
          cmake -S ../libzip-source/libzip-1.11.3 -B ../libzip-source/libzip-1.11.3/build -G Ninja
          cmake --build ../libzip-source/libzip-1.11.3/build
          sudo cmake --install ../libzip-source/libzip-1.11.3/build
          echo "Confirming header presence..."

      - name: Install Intel MacOS Dependencies
        if: matrix.os == 'macos-13'
        shell: bash
        run: |
          brew install boost
          brew install hdf5
          brew install libzip
          brew install ninja
          brew install libaec
          
          brew install llvm
          echo 'export PATH="/usr/local/opt/llvm/bin:$PATH"' >> /Users/runner/.bash_profile
          source /Users/runner/.bash_profile
          ln -s $(which gfortran-14) /usr/local/bin/gfortran

      - name: Install ARM MacOS dependencies
        if: matrix.os == 'macos-14'
        shell: bash
        run: |
          brew install boost
          brew install hdf5
          brew install libzip
          brew install ninja
          brew install libaec
          
          brew install llvm
          echo 'export PATH="/opt/homebrew/opt/llvm/bin:$PATH"' >> /Users/runner/.bash_profile
          ln -s /opt/homebrew/bin/gfortran-14 /usr/local/bin/gfortran

      - name: Install Windows Dependencies
        if: matrix.os == 'windows-latest'
        run: |
          choco install cmake --installargs 'ADD_CMAKE_TO_PATH=System'
          choco install ninja
          choco install msys2
          C:\tools\msys64\usr\bin\bash -lc "pacman -Sy --noconfirm \
          mingw-w64-clang-x86_64-cmake \
          mingw-w64-clang-x86_64-ninja \
          mingw-w64-clang-x86_64-toolchain \
          mingw-w64-clang-x86_64-boost \
          mingw-w64-clang-x86_64-hdf5 \
          mingw-w64-clang-x86_64-zlib \
          mingw-w64-clang-x86_64-libaec"
          echo "C:\tools\msys64\mingw64\bin" | Out-File -Append -Encoding ascii $env:GITHUB_PATH
          echo "C:\tools\msys64\clang64\bin" | Out-File -Append -Encoding ascii $env:GITHUB_PATH
          echo "C:\tools\msys64\clang64\lib" | Out-File -Append -Encoding ascii $env:GITHUB_PATH
          echo "C:\tools\msys64\clang64\include" | Out-File -Append -Encoding ascii $env:GITHUB_PATH

      - name: Build Wheels (Windows)
        uses: pypa/cibuildwheel@v2.23.2
        if: matrix.os == 'windows-latest'
        env:
          CIBW_BUILD: ${{ matrix.python_version }}
          CIBW_BEFORE_BUILD: "pip install cmake ninja"
          CIBW_ENVIRONMENT: >
            CC=clang
            CXX=clang++
            CMAKE_GENERATOR=Ninja
        # with:
        #   package-dir: .
        #   output-dir: wheelhouse
        #   config-file: "{package}/pyproject.toml"

      - name: Build Wheels (MacOS<x86_64>)
        uses: pypa/cibuildwheel@v2.23.2
        if: matrix.os == 'macos-13'
        env:
          CIBW_BUILD: ${{ matrix.python_version }}
          CIBW_ENVIRONMENT: >
            FC=/usr/local/bin/gfortran
        # with:
        #   package-dir: .
        #   output-dir: wheelhouse
        #   config-file: "{package}/pyproject.toml"

      - name: Build Wheels (MacOS<ARM>)
        uses: pypa/cibuildwheel@v2.23.2
        if: matrix.os == 'macos-14'
        env:
          MACOSX_DEPLOYMENT_TARGET: 14.0
          CIBW_BUILD: ${{ matrix.python_version }}
          CIBW_ENVIRONMENT: >
            FC=/opt/homebrew/bin/gfortran-14
        # with:
        #   package-dir: .
        #   output-dir: wheelhouse
        #   config-file: "{package}/pyproject.toml"

      - name: Build Wheels (Linux<ARM>)
        uses: pypa/cibuildwheel@v2.23.2
        if: matrix.os == 'ubuntu-24.04-arm'
        env:
          CIBW_BUILD: ${{ matrix.python_version }}
          CIBW_BEFORE_BUILD: "pip install h5py && export LIBZIP_INCLUDE_DIR=/usr/local/include && export LIBZIP_LIBRARY=/usr/local/lib/libzip.so"
        # with:
        #   package-dir: .
        #   output-dir: wheelhouse
        #   config-file: "{package}/pyproject.toml"

      - name: Build Wheels (Linux<x86_64>)
        uses: pypa/cibuildwheel@v2.23.2
        if: matrix.os == 'ubuntu-latest'
        env:
          CIBW_BUILD: ${{ matrix.python_version }}
          CIBW_BEFORE_BUILD:  "pip install h5py && export LIBZIP_INCLUDE_DIR=/usr/local/include && export LIBZIP_LIBRARY=/usr/local/lib/libzip.so"
        # with:
        #   package-dir: .
        #   output-dir: wheelhouse
        #   config-file: "{package}/pyproject.toml"

      - name: Upload Artifact (Python 3.9)
        uses: actions/upload-artifact@v4
        if: matrix.python_version == 'cp39-*'
        with:
          name: pyvcell-fv-${{ matrix.os }}-cp39-cibw-wheels
          path: ./wheelhouse/*.whl

      - name: Upload Artifact (Python 3.10)
        uses: actions/upload-artifact@v4
        if: matrix.python_version == 'cp310-*'
        with:
          name: pyvcell-fv-${{ matrix.os }}-cp310-cibw-wheels
          path: ./wheelhouse/*.whl

      - name: Upload Artifact (Python 3.11)
        uses: actions/upload-artifact@v4
        if: matrix.python_version == 'cp311-*'
        with:
          name: pyvcell-fv-${{ matrix.os }}-cp311-cibw-wheels
          path: ./wheelhouse/*.whl

      - name: Upload Artifact (Python 3.12)
        uses: actions/upload-artifact@v4
        if: matrix.python_version == 'cp312-*'
        with:
          name: pyvcell-fv-${{ matrix.os }}-cp312-cibw-wheels
          path: ./wheelhouse/*.whl

      - name: Upload Artifact (Python 3.13)
        uses: actions/upload-artifact@v4
        if: matrix.python_version == 'cp313-*'
        with:
          name: pyvcell-fv-${{ matrix.os }}-cp313-cibw-wheels
          path: ./wheelhouse/*.whl

      - name: Setup tmate session on failure
        uses: mxschmitt/action-tmate@v3
        if: ${{ failure() }}
        with:
          limit-access-to-actor: true