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Merge pull request #1602 from virtualcell/remove-admin-reqs
Remove admin reqs
2 parents 5678ce1 + 3b46829 commit 456eeea

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4 files changed

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.github/workflows/CI-full.yml

Lines changed: 34 additions & 43 deletions
Original file line numberDiff line numberDiff line change
@@ -1,11 +1,15 @@
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name: CI-application-containers
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name: Build and Publish VCell Docker Images
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on:
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workflow_dispatch:
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inputs:
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tag:
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description: "Repository tag (e.g., 7.7.0.37)"
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required: true
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# client_only:
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# description: "Build only client images (true/false)"
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# required: false
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# default: "false"
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release:
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types: [published]
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@@ -60,47 +64,15 @@ jobs:
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- name: Install Dependencies
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run: pip install -r requirements.txt
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- name: build vcell-cli-utils package
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- name: build python packages
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run: |
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cd vcell-cli-utils
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poetry install
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poetry run python -m pytest
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- name: build vcell-admin package
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run: |
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cd docker/swarm/vcell-admin
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poetry install
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poetry run python -m pytest
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- name: build pythonCopasiOpt package
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run: |
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cd pythonCopasiOpt/vcell-opt
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poetry install
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poetry run python -m pytest
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- name: build pythonVtk package
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run: |
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cd pythonVtk
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poetry install
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poetry run python -m pytest
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- name: build vcutils package
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run: |
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cd python-utils
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poetry install
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poetry run python -m pytest
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- name: build python-restclient package
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run: |
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cd python-restclient
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poetry install
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poetry run python -m pytest
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- name: build vcelldata package
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run: |
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cd pythonData
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poetry install
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poetry run python -m pytest
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set -ux
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for POETRY_DIR in vcell-cli-utils docker/swarm/vcell-admin pythonCopasiOpt/vcell-opt pythonVtk python-utils python-restclient pythonData;\
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do pushd $POETRY_DIR;\
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poetry install;\
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poetry run python -m pytest;\
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popd;\
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done
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- name: setup java 17 with maven cache
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uses: actions/setup-java@v4
@@ -115,12 +87,14 @@ jobs:
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cd docker/build
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echo "${{ secrets.GITHUB_TOKEN }}" | sudo docker login ghcr.io -u ${{ github.actor }} --password-stdin
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echo "${{ secrets.GITHUB_TOKEN }}" | docker login ghcr.io -u ${{ github.actor }} --password-stdin
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./build.sh all ${{ env.VCELL_REPO_NAMESPACE }} ${{ env.VCELL_TAG }}
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export BUILD_IMAGES="all"
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./build.sh ${BUILD_IMAGES} ${{ env.VCELL_REPO_NAMESPACE }} ${{ env.VCELL_TAG }}
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- name: tag as latest and push to registry
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shell: bash
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run: |
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for CONTAINER in vcell-exporter vcell-api vcell-rest vcell-webapp-prod vcell-webapp-dev vcell-webapp-stage vcell-webapp-island vcell-batch vcell-opt vcell-clientgen vcell-data vcell-db vcell-mongo vcell-sched vcell-submit vcell-admin;\
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export CONTAINER_SET="vcell-exporter vcell-api vcell-rest vcell-webapp-prod vcell-webapp-dev vcell-webapp-stage vcell-webapp-island vcell-batch vcell-opt vcell-clientgen vcell-data vcell-db vcell-mongo vcell-sched vcell-submit vcell-admin"
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for CONTAINER in ${CONTAINER_SET};\
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do docker tag ${VCELL_REPO_NAMESPACE}/$CONTAINER:${VCELL_TAG} ${VCELL_REPO_NAMESPACE}/$CONTAINER:latest;\
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docker tag ${VCELL_REPO_NAMESPACE}/$CONTAINER:${VCELL_TAG} ${VCELL_REPO_NAMESPACE}/$CONTAINER:${FRIENDLY_TAG};\
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docker push --all-tags ${VCELL_REPO_NAMESPACE}/$CONTAINER;\
@@ -129,3 +103,20 @@ jobs:
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- name: Setup tmate session
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uses: mxschmitt/action-tmate@v3
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if: ${{ failure() }}
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# if [ "${{ github.event.inputs.client_only }}" = "true" ]; then
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# echo "Building only client images"
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# export BUILD_IMAGES="clientgen"
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# else
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# echo "Building all images"
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#
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# fi
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# if [ "${{ github.event.inputs.client_only }}" = "true" ]; then
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# echo "Building only client images"
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# export CONTAINER_SET="vcell-clientgen"
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# else
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# echo "Building all images"
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# export CONTAINER_SET="vcell-exporter vcell-api vcell-rest vcell-webapp-prod vcell-webapp-dev vcell-webapp-stage vcell-webapp-island vcell-batch vcell-opt vcell-clientgen vcell-data vcell-db vcell-mongo vcell-sched vcell-submit vcell-admin"
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# fi

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