pch_fit_list[[1]] : subscript out of bounds

[GreenGilad]

I am trying out the package and running into some trouble. After setting up as described in readme(and making sure the right condaenv is loaded), I am trying to run the fit_pch_bootstrap function and getting the error in the title.

I'm am running the code as follows:

library(ParetoTI)
reticulate::use_condaenv("reticulate_PCHA", conda = "auto", required = TRUE)
arc = fit_pch_bootstrap(t(obj@reductions$pca@cell.embeddings), n = 200, sample_prop = 0.75, seed = 235,
                                         noc = 4, delta = 0, conv_crit = 1e-04, type = "s")

I saw this happened also in a previous issue (#4) but there isn't a solution for this problem there (I am already running with type="s")

[alych9]

Hi, GreenGilad!
I 'am running the fit_pch() function and getting the same error too. Have you solve this problem?

[GoldenRain-Su]

Hello!
I am running the fit_pch_bootstrap(data, n = 1, sample_prop = 0.80, seed = 235,
noc = 5, delta = 5, conv_crit = 1e-04, type = "m",
order_type = "align") function and getting the same error too. Have anyone solve this problem?