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Closing this..

It was caused by how ArgoCD and Velero interact. When using scheduled backups Argo would delete the backups instantly unless this was configured:

      useOwnerReferencesInBackup: true

However, enabling that would cause the backups to be affected whenever the schedule was updated or deleted, essentially triggering deletions of backups if you were to ever reconfigure a schedule.

The solution that ended up working was to add this to the excludedResources in the ArgoCD values.yaml:

configs:
    cm:
      resource.exclusions: |
        ### Remember to also configure the default exclusions here or you will override them.
        - apiGroups:
          - velero.io
          kind…

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@kaovilai
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@agelogos
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