use .wic file extension

Author: jfennick

.vscode/settings.json

@@ -11,8 +11,9 @@
         "120"
     ],
     "gitlens.hovers.enabled": false,
+    "files.associations": {"*.wic": "yaml"},
     "yaml.schemas": {
-        "../workflow-inference-compiler/autogenerated/schemas/wic.json": "*.yml"
+        "../workflow-inference-compiler/autogenerated/schemas/wic.json": "*.wic"
     },
     "yaml.customTags": [
         "!&",

…s/biosimspace/conversion_amb_gro_zip.yml …s/biosimspace/conversion_amb_gro_zip.wiccwl_adapters/file_format_conversions/biosimspace/conversion_amb_gro_zip.yml renamed to cwl_adapters/file_format_conversions/biosimspace/conversion_amb_gro_zip.wic cwl_adapters/file_format_conversions/biosimspace/conversion_amb_gro_zip.yml renamed to cwl_adapters/file_format_conversions/biosimspace/conversion_amb_gro_zip.wic

@@ -1,4 +1,4 @@
-// NOTE: This file should be in one of the directories listed in yml_dirs.txt
+// NOTE: This file should be in one of the directories listed in search_paths_wic
 // (Technically comments are not allowed in JSON, but we are manually
 // stripping out all lines that start with // before parsing.)
 {

…biosimspace/conversion_unzip_gro_amb.yml …biosimspace/conversion_unzip_gro_amb.wiccwl_adapters/file_format_conversions/biosimspace/conversion_unzip_gro_amb.yml renamed to cwl_adapters/file_format_conversions/biosimspace/conversion_unzip_gro_amb.wic cwl_adapters/file_format_conversions/biosimspace/conversion_unzip_gro_amb.yml renamed to cwl_adapters/file_format_conversions/biosimspace/conversion_unzip_gro_amb.wic

@@ -1,9 +1,9 @@
 steps:
-- run_diffdock.yml:
+- run_diffdock.wic:
 
 wic:
   steps:
-    (1, run_diffdock.yml):
+    (1, run_diffdock.wic):
       wic:
         steps:
           (1, extract_pdbbind_refined):