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Changes file update for release 91.0.0
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LIST OF CHANGES
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release 91.0.0
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- modified is_i5opposite when there is no reverse read
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- removed scripts for monitoring instruments via ftp; related
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modules and methods, their tests and test data are removed
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- functionality for checking instruments' wash status and setting
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'was required' instrument tag is lost; this shoud be done outside
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of staging monitor
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- minor change to npg_tracking::util::pipeline_config to move bqsr and
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haplotype caller to a tertiary section which can be set by specifically
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by reference or by using a default study config.
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- npg_tracking::util::pipeline_config is refactored to restrict access
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to attributes which should not be set by the caller (local_bin, product_config)
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and to enable setting product release configuration file path via the
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new product_conf_file_path attribute
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- npg_tracking::util::pipeline_config:
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move bqsr and haplotype caller to a tertiary section which can be
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set specifically by reference or by using a default study config;
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restrict access to attributes which should not be set by the caller
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(local_bin, product_config);
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enable setting product release configuration file path via the
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new product_conf_file_path attribute
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- genome reference hierarchy in the current samplesheet is not compatible with
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the latest version of MiSeq Illumina software; setting Workflow value to
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GenerateFastQ prevents the instrument's software from using this value,
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hence we can stop setting genome reference path altogether
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- make impossible to download cbcl file via tracking web pages
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release 90.3.0
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- npg_tracking::glossary::moniker -

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