I encounter when i reproduce to test 3d synpase

[zyqzyqhappiness]

I find the code finally output 13 classes' results, but in inference_synpase.py, you wanna 8 classes like other papers. i wonder is the final result save in "summary.json"? and when i reproduce the code, i find inference_synpase.py didnt work , as well as write in the text. Then my final result is different from your paper, the result is in the image

[Leonngm]

Hi,
for 3D training we use the nnFormer training setup. For Synapse, 13 classes are present but only 8 are evaluated. If you want to consider all 13 classes, compare your results to nnFormer for BTCV. Synapse is a subset of BTCV.
The eight classes in Synapse are: Spleen, Right Kidney, Left Kidney, Gallbladder, Liver, Stomach, Aorta and Pancreas.

BTCV has the additional classes: Esophagus, inferior vena cava, portal and splenic veins, right adrenal gland, left adrenal gland.

You can find the result for dice score under "Dice" in the dictionary.

[mrbird643]

Hi, for 3D training we use the nnFormer training setup. For Synapse, 13 classes are present but only 8 are evaluated. If you want to consider all 13 classes, compare your results to nnFormer for BTCV. Synapse is a subset of BTCV. The eight classes in Synapse are: Spleen, Right Kidney, Left Kidney, Gallbladder, Liver, Stomach, Aorta and Pancreas.

BTCV has the additional classes: Esophagus, inferior vena cava, portal and splenic veins, right adrenal gland, left adrenal gland.

You can find the result for dice score under "Dice" in the dictionary.

Could you please provide the replication of the experimental results for the 2D version? Where should I download the pre-trained weights in the code?

maxvit/maxvit_tiny_rw_224_sw-7d0dffeb.pth
maxvit_rmlp_tiny_rw_256_sw-bbef0ff5.pth
maxvit_rmlp_small_rw_224_sw-6ef0ae4f.pth
maxxvit_rmlp_small_rw_256_sw-37e217ff.pth @Leonngm