version update for LRSDAY: v1.4.0 -> v1.5.0

Author: yjx1217

CHANGELOG.md

@@ -7,6 +7,21 @@ and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.
 
 ## [Unreleased]
 
+## [1.5.0] - 2019-05-13
+### Added
+- Supports for native ONT nanopore basecalling, demultiplexing, and read profile plotting.
+- An lite-weight bash script for generating dotplot for any pairs of fasta files.
+### Changed
+- Better robustness for the dependency installation script. 
+- Reducing the requirements of setting output prefix by assuming the same prefix was used across different modules.
+- Setting adjustment for long-read filtering and downsampling.
+- Applying read filtering/downsampling for the testing example.
+- Software version updates for a number of dependencies.
+### Fixed
+- A bug that might lead to missing gene annotation in certain genomic region.
+- Typos in the installation script.
+- Typos in the manual.
+
 ## [1.4.0] - 2019-03-21
 ### Changed
 - Supports for multi-round assembly polishing using both long and short reads.

Example_Outputs/SK1.assembly.final.fa.gz

@@ -1,17 +1,17 @@
 total sequence count: 34
-total sequence length: 12448003
-min sequence length: 1248
-max sequence length: 1480301
-mean sequence length: 366117.74
-median sequence length: 60826.50
-N50: 923676
+total sequence length: 12473902
+min sequence length: 12836
+max sequence length: 1480337
+mean sequence length: 366879.47
+median sequence length: 57378.00
+N50: 923760
 L50: 6
-N90: 341518
+N90: 328166
 L90: 14
-A%: 30.89
+A%: 30.88
 T%: 30.81
-G%: 19.14
-C%: 19.13
-AT%: 61.70
-GC%: 38.26
+G%: 19.12
+C%: 19.14
+AT%: 61.69
+GC%: 38.27
 N%: 0.04