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Hi @yoyololicon ! As you said yesterday, I opened an issue here.. might be better. Thanks for the fast answer, btw! I tried the masking of the NaNs before performing the unwrapping already, but then the issue is that the unwrapping works well in some places and not in others. I think it may have something to do with the starting point of the unwrapping... I think some weights are usually used in other methods to solve this, but I don't have this option here, right? Maybe I could use the edges or starting pixel parameter to try and fix this?
I am using wrapped cyclical data from -pi to pi and the unwrapping works well until there are too many NaNs dividing two areas.
I'm really trying to find a PUMA code that solves this, since right now I'm using SNAPHU but I think PUMA could be better.
Thanks!!