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HW4_cuda.cu
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347 lines (320 loc) · 8.98 KB
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/***
* Author:Yun-Chen Lo
* File:HW4_cuda.cu
*/
#include <stdio.h>
#include <stdlib.h>
#include <string.h>
#include <stdint.h>
#include <fcntl.h>
#include <cuda.h>
#include <assert.h>
#include <sys/stat.h>
#include <sys/mman.h>
#include <unistd.h>
#define INF 1000000000
int *Hostmap; // host memory for input adjacent file
int *devMap; // device memory
int N; // number of vertex
int ceil(int a, int b){
return (a + b -1)/b;
}
int readInput(const char* infile, int B){
int in=0;
int i, j, width;
int fd = open(infile, O_RDONLY, (mode_t)0600);
struct stat fileInfo = {0};
if (fstat(fd, &fileInfo) == -1)
{
perror("Error getting the file size");
exit(EXIT_FAILURE);
}
printf("File size is %ji\n", (intmax_t)fileInfo.st_size);
char *map = (char *)mmap(0, fileInfo.st_size, PROT_READ, MAP_SHARED, fd, 0);
int start_i;
printf("map[0]:%d, map[1]:%d\n", map[0], map[1]);
for (i = 0; i < fileInfo.st_size; i++){
if(map[i] == ' ' || map[i] == '\n'){
if(map[i] == '\n'){
start_i = i;
break;
}
else{
N = in;
}
in = 0;
}
else{
in = (int)map[i]-(int)'0' + 10 * in;
}
}
printf("N:%d start_i:%d\n", N, start_i);
if(ceil(N, B) == N/B || ceil(N, B) == 1){
if(ceil(N, B) % 2 == 0){
width = N + B;
cudaMallocHost(&Hostmap, (width*width)*sizeof(int));
}
else{
width = N;
cudaMallocHost(&Hostmap, (width*width)*sizeof(int));
}
}
else{
if(ceil(N, B) % 2 == 0){
width = ceil(N, B) * B + B;
cudaMallocHost(&Hostmap, (width*width)*sizeof(int));
}
else{
width = ceil(N, B) * B;
cudaMallocHost(&Hostmap, (width*width)*sizeof(int));
}
}
printf("width = %d\n ", width);
for(i=0; i<width; i++){
for(j=0; j<width; j++){
if(i!=j)
Hostmap[width*i + j] = INF;
else if(i == j && i < N)
Hostmap[width*i + j] = 0;
else
Hostmap[width*i + j] = INF;
}
}
int h_i=0, h_j=0;
in = 0;
for (i = start_i; i < fileInfo.st_size; i++){
if(map[i] == ' ' || map[i] == '\n'){
j++;
if(map[i] == '\n'){
j = 0;
Hostmap[h_i*width + h_j] = in;
}
else{
h_i = (j == 1)?in:h_i;
h_j = (j == 2)?in:h_j;
}
in = 0;
}
else{
in = (int)map[i]-(int)'0' + 10 * in;
}
}
return width;
}
__global__ void floyd_phaseI(int k, int *devMap, int B, int d_N){
extern __shared__ int shared_mem[];
int i = threadIdx.y;
int j = threadIdx.x;
int base = k * B;
int d_i = base + i;
int d_j = base + j;
int g_mem_index = d_i * d_N + d_j;
shared_mem[i*B + j] = devMap[g_mem_index];
__syncthreads();
//#pragma unroll 16
for(int l = 0; l < B; l++){
if (shared_mem[i*B + l] + shared_mem[l*B + j] < shared_mem[i*B + j]){
shared_mem[i*B + j] = shared_mem[i*B + l] + shared_mem[l*B + j];
}
__syncthreads();
}
devMap[g_mem_index] = shared_mem[i*B + j];
}
__global__ void floyd_phaseII(int k, int *devMap, int B, int d_N){
extern __shared__ int S[];
if(blockIdx.x != k){
int *shared_mem = &S[0];
int *shared_buffer = &S[B*B];
int i = threadIdx.y;
int j = threadIdx.x;
int base = k*B;
int d_i, d_j;
int g_mem_index = (i+base) * d_N + (j+base);
if(blockIdx.y == 0){ // row
d_i = base + threadIdx.y;
d_j = blockDim.x * blockIdx.x + threadIdx.x;
shared_mem[j*B + i] = devMap[g_mem_index];
g_mem_index = d_i * d_N + d_j;
shared_buffer[i*B + j] = devMap[g_mem_index];
}
else { // col
d_i = blockDim.x * blockIdx.x + threadIdx.y;
d_j = base + threadIdx.x;
shared_mem[i*B + j] = devMap[g_mem_index];
g_mem_index = d_i * d_N + d_j;
shared_buffer[j*B + i] = devMap[g_mem_index];
}
__syncthreads();
if(blockIdx.y == 0){
//#pragma unroll 16
for(int l = 0; l < B; l++){
if(shared_mem[l*B + i] + shared_buffer[l*B + j] < shared_buffer[i*B +j]){
shared_buffer[i*B + j] = shared_mem[l*B +i] + shared_buffer[l*B +j];
}
__syncthreads();
}
devMap[g_mem_index] = shared_buffer[i*B +j];
}
else{
//#pragma unroll 16
for(int l = 0; l < B; l++){
if(shared_buffer[l*B +i] + shared_mem[l*B +j] < shared_buffer[j*B +i]){
shared_buffer[j*B +i] = shared_buffer[l*B +i] + shared_mem[l*B +j];
}
__syncthreads();
}
devMap[g_mem_index] = shared_buffer[j*B +i];
}
}
}
__global__ void floyd_phaseIII(int k, int *devMap, int B, int d_N, int round, int round_div_2){
extern __shared__ int S[];
int *d_c_0 = &S[0];
int *d_c_1 = &S[1*B*B];
int *d_r_0 = &S[2*B*B];
int *d_r_1 = &S[3*B*B];
int block_base_x, block_base_y;
if(blockIdx.x >= k){
block_base_x = 1;
}else{
block_base_x = 0;
}
if(blockIdx.y >= k){
block_base_y = 1;
}
else{
block_base_y = 0;
}
int block_x_0, block_x_1, block_x_2, block_x_3;
block_x_0 = block_base_x + blockIdx.x;
block_x_1 = block_x_0 + round_div_2;
//printf("blockdim%d\n", blockDim.x);
if(blockIdx.x < k && block_x_1 >= k){
block_x_1 = block_x_1 + 1;
}
int block_y_0, block_y_1, block_y_2, block_y_3;
block_y_0 = block_base_y + blockIdx.y;
block_y_2 = block_y_0 + round_div_2;
if(blockIdx.y < k && block_y_2 >= k){
block_y_2 = block_y_2 + 1;
}
int d_i_0 = block_y_0 * B + threadIdx.y;
int d_i_1 = d_i_0;
int d_i_2 = block_y_2 * B + threadIdx.y;
int d_i_3 = d_i_2;
int d_j_0 = block_x_0 * B + threadIdx.x;
int d_j_1 = block_x_1 * B + threadIdx.x;
int d_j_2 = d_j_0;
int d_j_3 = d_j_1;
//printf("i, j = [%d, %d]| [%d, %d]\n", d_i_0, d_j_0, d_i_2, d_j_1);
int i = threadIdx.y;
int j = threadIdx.x;
int base = k * B;
int col_base_0 = (base + i) * d_N + d_j_0;
int col_base_1 = (base + i) * d_N + d_j_1;
int row_base_0 = d_i_0 * d_N + (base + j);
int row_base_1 = d_i_2 * d_N + (base + j);
int oldD_0, oldD_1, oldD_2, oldD_3;
if(block_x_1 < round && block_y_2 < round){
d_r_1[i*B + j] = devMap[col_base_1];
d_c_1[i*B + j] = devMap[row_base_1];
oldD_1 = devMap[d_i_1*d_N + d_j_1];
oldD_2 = devMap[d_i_2*d_N + d_j_2];
oldD_3 = devMap[d_i_3*d_N + d_j_3];
}
d_r_0[i*B + j] = devMap[col_base_0];
d_c_0[i*B + j] = devMap[row_base_0];
oldD_0 = devMap[d_i_0*d_N + d_j_0];
__syncthreads();
int newD_0, newD_1, newD_2, newD_3;
//printf("[%d]blockx0:%d blocky0:%d blockx1:%dblocky2:%d\n", k, block_x_0, block_y_0,block_x_1, block_y_2);
if(block_x_1>=round || block_y_2 >= round){
//printf("hello\n");
for (int t = 0; t < B; t++) {
newD_0 = d_c_0[i*B + t] + d_r_0[t*B + j];
if (newD_0 < oldD_0)
oldD_0 = newD_0;
__syncthreads();
}
devMap[d_i_0 * d_N + d_j_0] = oldD_0;
}
else{
for (int t = 0; t < B; t++) {
newD_0 = d_c_0[i*B + t] + d_r_0[t*B + j];
newD_1 = d_c_0[i*B + t] + d_r_1[t*B + j];
newD_2 = d_c_1[i*B + t] + d_r_0[t*B + j];
newD_3 = d_c_1[i*B + t] + d_r_1[t*B + j];
if (newD_0 < oldD_0)
oldD_0 = newD_0;
if (newD_1 < oldD_1)
oldD_1 = newD_1;
if (newD_2 < oldD_2)
oldD_2 = newD_2;
if (newD_3 < oldD_3)
oldD_3 = newD_3;
__syncthreads();
}
devMap[d_i_0 * d_N + d_j_0] = oldD_0;
devMap[d_i_1 * d_N + d_j_1] = oldD_1;
devMap[d_i_2 * d_N + d_j_2] = oldD_2;
devMap[d_i_3 * d_N + d_j_3] = oldD_3;
}
}
void Block_floydWarshall(int* devMap, int B, int width){
int k;
int round = ceil(N, B);
int BLKSIZE;
if(round == 1){
BLKSIZE = N;
}
else{
BLKSIZE = B;
}
if(round%2==0){
round++;
}
dim3 blockSize1(BLKSIZE, BLKSIZE);
dim3 gridSize2(round, 2);
dim3 blockSize2(BLKSIZE, BLKSIZE);
dim3 gridSize3((ceil((round-1), 2)), ceil((round-1), 2));
dim3 blockSize3(BLKSIZE, BLKSIZE);
printf("BLKSIZE = %d",BLKSIZE);
printf("round = %d %d\n", round,ceil((round-1), 2));
for(k = 0; k<round; k++){
floyd_phaseI<<<1, blockSize1, B*B*sizeof(int)>>>(k, devMap, BLKSIZE, width);
floyd_phaseII<<<gridSize2, blockSize2, 2*B*B*sizeof(int)>>>(k, devMap, BLKSIZE, width);
floyd_phaseIII<<<gridSize3, blockSize3, 4*B*B*sizeof(int)>>>(k, devMap, BLKSIZE, width, round, ceil((round-1),2));
}
}
void saveSolution(int* FinalMap, const char* outfile){
FILE *out;
out=fopen(outfile, "wb");
fwrite(FinalMap,sizeof(int),N*N,out);
fclose(out);
}
int main(int argc, char** argv) {
const char* infile = argv[1];
const char* outfile = argv[2];
int B = atoi(argv[3]); //block size
int width;
width = readInput(infile, B);
cudaMalloc(&devMap, width * width * sizeof(int));
cudaMemcpy(devMap, Hostmap, sizeof(int) * width * width, cudaMemcpyHostToDevice);
Block_floydWarshall(devMap, B, width);
cudaMemcpy(Hostmap, devMap, sizeof(int) * width * width, cudaMemcpyDeviceToHost);
cudaFree(devMap);
printf("Hostmap\n");
printf("%d %d\n", Hostmap[1], Hostmap[width*width-1]);
cudaError_t err = cudaGetLastError();
if (err != cudaSuccess)
printf("Error: %s\n", cudaGetErrorString(err));
int *FinalMap = (int*)malloc((N*N)*sizeof(int));
for(int i = 0; i < width; i++){
for(int j = 0; j < width; j++){
if(i < N && j < N)
FinalMap[N * i + j] = Hostmap[width*i + j];
}
}
saveSolution(FinalMap, outfile);
return 0;
}