|
1 | | -import warnings |
2 | | -from contextlib import suppress |
3 | | -from importlib.metadata import PackageNotFoundError, version |
| 1 | +import importlib.util |
| 2 | +from importlib.metadata import version |
4 | 3 | from types import ModuleType |
5 | 4 | from typing import Optional |
6 | 5 |
|
7 | | -_zfpy: Optional[ModuleType] = None |
| 6 | +import numpy as np |
8 | 7 |
|
9 | | -_zfpy_version: tuple = () |
10 | | -with suppress(PackageNotFoundError): |
11 | | - _zfpy_version = tuple(map(int, version("zfpy").split("."))) |
| 8 | +from .abc import Codec |
| 9 | +from .compat import ensure_bytes, ensure_contiguous_ndarray, ndarray_copy |
| 10 | + |
| 11 | +_zfpy: Optional[ModuleType] |
| 12 | +_zfpy_spec = importlib.util.find_spec("zfpy") |
| 13 | + |
| 14 | +if _zfpy_spec is None: |
| 15 | + _zfpy = None |
| 16 | +else: |
| 17 | + import zfpy as _zfpy # type: ignore[no-redef] |
12 | 18 |
|
13 | | -if _zfpy_version: |
14 | | - # Check NumPy version |
15 | | - _numpy_version: tuple = tuple(map(int, version("numpy").split('.'))) |
| 19 | + |
| 20 | +def _check_compatible_numpy() -> None: |
| 21 | + _numpy_version = tuple(map(int, version("numpy").split('.'))) |
| 22 | + _zfpy_version = tuple(map(int, version("zfpy").split("."))) |
16 | 23 | if _numpy_version >= (2, 0, 0) and _zfpy_version <= (1, 0, 1): # pragma: no cover |
17 | 24 | _zfpy_version = () |
18 | | - warnings.warn( |
| 25 | + raise RuntimeError( |
19 | 26 | "NumPy version >= 2.0.0 detected. The zfpy library is incompatible with this version of NumPy. " |
20 | 27 | "Please downgrade to NumPy < 2.0.0 or wait for an update from zfpy.", |
21 | | - UserWarning, |
22 | | - stacklevel=2, |
23 | 28 | ) |
24 | | - else: |
25 | | - with suppress(ImportError): |
26 | | - import zfpy as _zfpy # type: ignore[no-redef] |
27 | | - |
28 | | -if _zfpy: |
29 | | - import numpy as np |
30 | | - |
31 | | - from .abc import Codec |
32 | | - from .compat import ensure_bytes, ensure_contiguous_ndarray, ndarray_copy |
33 | | - |
34 | | - # noinspection PyShadowingBuiltins |
35 | | - class ZFPY(Codec): |
36 | | - """Codec providing compression using zfpy via the Python standard |
37 | | - library. |
38 | | -
|
39 | | - Parameters |
40 | | - ---------- |
41 | | - mode : integer |
42 | | - One of the zfpy mode choice, e.g., ``zfpy.mode_fixed_accuracy``. |
43 | | - tolerance : double, optional |
44 | | - A double-precision number, specifying the compression accuracy needed. |
45 | | - rate : double, optional |
46 | | - A double-precision number, specifying the compression rate needed. |
47 | | - precision : int, optional |
48 | | - A integer number, specifying the compression precision needed. |
49 | | -
|
50 | | - """ |
51 | | - |
52 | | - codec_id = "zfpy" |
53 | | - |
54 | | - def __init__( |
55 | | - self, |
56 | | - mode=_zfpy.mode_fixed_accuracy, |
57 | | - tolerance=-1, |
58 | | - rate=-1, |
59 | | - precision=-1, |
60 | | - compression_kwargs=None, |
61 | | - ): |
62 | | - self.mode = mode |
63 | | - if mode == _zfpy.mode_fixed_accuracy: |
64 | | - self.compression_kwargs = {"tolerance": tolerance} |
65 | | - elif mode == _zfpy.mode_fixed_rate: |
66 | | - self.compression_kwargs = {"rate": rate} |
67 | | - elif mode == _zfpy.mode_fixed_precision: |
68 | | - self.compression_kwargs = {"precision": precision} |
69 | | - |
70 | | - self.tolerance = tolerance |
71 | | - self.rate = rate |
72 | | - self.precision = precision |
73 | | - |
74 | | - def encode(self, buf): |
75 | | - # not flatten c-order array and raise exception for f-order array |
76 | | - if not isinstance(buf, np.ndarray): |
77 | | - raise TypeError( |
78 | | - "The zfp codec does not support none numpy arrays." |
79 | | - f" Your buffers were {type(buf)}." |
80 | | - ) |
81 | | - if buf.flags.c_contiguous: |
82 | | - flatten = False |
83 | | - else: |
84 | | - raise ValueError( |
85 | | - "The zfp codec does not support F order arrays. " |
86 | | - f"Your arrays flags were {buf.flags}." |
87 | | - ) |
88 | | - buf = ensure_contiguous_ndarray(buf, flatten=flatten) |
89 | | - |
90 | | - # do compression |
91 | | - return _zfpy.compress_numpy(buf, write_header=True, **self.compression_kwargs) |
92 | | - |
93 | | - def decode(self, buf, out=None): |
94 | | - # normalise inputs |
95 | | - buf = ensure_bytes(buf) |
96 | | - if out is not None: |
97 | | - out = ensure_contiguous_ndarray(out) |
98 | | - |
99 | | - # do decompression |
100 | | - dec = _zfpy.decompress_numpy(buf) |
101 | | - |
102 | | - # handle destination |
103 | | - if out is not None: |
104 | | - return ndarray_copy(dec, out) |
105 | | - else: |
106 | | - return dec |
107 | | - |
108 | | - def __repr__(self): |
109 | | - return ( |
110 | | - f"{type(self).__name__}(mode={self.mode!r}, " |
111 | | - f"tolerance={self.tolerance}, rate={self.rate}, " |
112 | | - f"precision={self.precision})" |
| 29 | + |
| 30 | + |
| 31 | +class ZFPY(Codec): |
| 32 | + """Codec providing compression using zfpy via the Python standard |
| 33 | + library. |
| 34 | +
|
| 35 | + Parameters |
| 36 | + ---------- |
| 37 | + mode : integer |
| 38 | + One of the zfpy mode choice, e.g., ``zfpy.mode_fixed_accuracy``. |
| 39 | + tolerance : double, optional |
| 40 | + A double-precision number, specifying the compression accuracy needed. |
| 41 | + rate : double, optional |
| 42 | + A double-precision number, specifying the compression rate needed. |
| 43 | + precision : int, optional |
| 44 | + A integer number, specifying the compression precision needed. |
| 45 | +
|
| 46 | + """ |
| 47 | + |
| 48 | + codec_id = "zfpy" |
| 49 | + |
| 50 | + def __init__( |
| 51 | + self, |
| 52 | + mode=_zfpy.mode_fixed_accuracy, |
| 53 | + tolerance=-1, |
| 54 | + rate=-1, |
| 55 | + precision=-1, |
| 56 | + compression_kwargs=None, |
| 57 | + ): |
| 58 | + if _zfpy is None: |
| 59 | + raise RuntimeError("The ZFPY codec requires the 'zfpy' package to be installed.") |
| 60 | + _check_compatible_numpy() |
| 61 | + |
| 62 | + self.mode = mode |
| 63 | + if mode == _zfpy.mode_fixed_accuracy: |
| 64 | + self.compression_kwargs = {"tolerance": tolerance} |
| 65 | + elif mode == _zfpy.mode_fixed_rate: |
| 66 | + self.compression_kwargs = {"rate": rate} |
| 67 | + elif mode == _zfpy.mode_fixed_precision: |
| 68 | + self.compression_kwargs = {"precision": precision} |
| 69 | + |
| 70 | + self.tolerance = tolerance |
| 71 | + self.rate = rate |
| 72 | + self.precision = precision |
| 73 | + |
| 74 | + def encode(self, buf): |
| 75 | + # not flatten c-order array and raise exception for f-order array |
| 76 | + if not isinstance(buf, np.ndarray): |
| 77 | + raise TypeError( |
| 78 | + "The zfp codec does not support none numpy arrays." |
| 79 | + f" Your buffers were {type(buf)}." |
113 | 80 | ) |
| 81 | + if buf.flags.c_contiguous: |
| 82 | + flatten = False |
| 83 | + else: |
| 84 | + raise ValueError( |
| 85 | + "The zfp codec does not support F order arrays. " |
| 86 | + f"Your arrays flags were {buf.flags}." |
| 87 | + ) |
| 88 | + buf = ensure_contiguous_ndarray(buf, flatten=flatten) |
| 89 | + |
| 90 | + # do compression |
| 91 | + return _zfpy.compress_numpy(buf, write_header=True, **self.compression_kwargs) |
| 92 | + |
| 93 | + def decode(self, buf, out=None): |
| 94 | + # normalise inputs |
| 95 | + buf = ensure_bytes(buf) |
| 96 | + if out is not None: |
| 97 | + out = ensure_contiguous_ndarray(out) |
| 98 | + |
| 99 | + # do decompression |
| 100 | + dec = _zfpy.decompress_numpy(buf) |
| 101 | + |
| 102 | + # handle destination |
| 103 | + if out is not None: |
| 104 | + return ndarray_copy(dec, out) |
| 105 | + else: |
| 106 | + return dec |
| 107 | + |
| 108 | + def __repr__(self): |
| 109 | + return ( |
| 110 | + f"{type(self).__name__}(mode={self.mode!r}, " |
| 111 | + f"tolerance={self.tolerance}, rate={self.rate}, " |
| 112 | + f"precision={self.precision})" |
| 113 | + ) |
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