Merge branch 'main' into v3_docs

Author: sanketverma1704

.github/workflows/codeql-analysis.yml

@@ -25,7 +25,7 @@ jobs:
     strategy:
       matrix:
         python-version: ['3.11']
-        numpy-version: ['2.0']
+        numpy-version: ['2.1']
         dependency-set: ["minimal"]
 
     steps:

.github/workflows/gpu_test.yml

@@ -26,7 +26,7 @@ jobs:
     strategy:
       matrix:
         python-version: ['3.11']
-        numpy-version: ['1.26']
+        numpy-version: ['2.1']
         dependency-set: ["optional"]
 
     steps:

.github/workflows/hypothesis.yaml

@@ -55,7 +55,7 @@ jobs:
         with:
           name: releases
           path: dist
-      - uses: pypa/gh-action-pypi-publish@v1.10.3
+      - uses: pypa/gh-action-pypi-publish@v1.11.0
         with:
           user: __token__
           password: ${{ secrets.pypi_password }}

.github/workflows/releases.yml

@@ -16,14 +16,32 @@ concurrency:
 
 jobs:
   test:
-    name: py=${{ matrix.python-version }}, np=${{ matrix.numpy-version }}, deps=${{ matrix.dependency-set }}
+    name: os=${{ matrix.os }}, py=${{ matrix.python-version }}, np=${{ matrix.numpy-version }}, deps=${{ matrix.dependency-set }}
 
-    runs-on: ubuntu-latest
     strategy:
       matrix:
         python-version: ['3.11', '3.12', '3.13']
-        numpy-version: ['1.25', '1.26', '2.0']
+        numpy-version: ['1.25', '2.1']
         dependency-set: ["minimal", "optional"]
+        os: ["ubuntu-latest"]
+        include:
+          - python-version: '3.11'
+            numpy-version: '1.25'
+            dependency-set: 'optional'
+            os: 'macos-latest'
+          - python-version: '3.13'
+            numpy-version: '2.1'
+            dependency-set: 'optional'
+            os: 'macos-latest'
+          - python-version: '3.11'
+            numpy-version: '1.25'
+            dependency-set: 'optional'
+            os: 'windows-latest'
+          - python-version: '3.13'
+            numpy-version: '2.1'
+            dependency-set: 'optional'
+            os: 'windows-latest'
+    runs-on: ${{ matrix.os }}
 
     steps:
     - uses: actions/checkout@v4
@@ -43,3 +61,35 @@ jobs:
     - name: Run Tests
       run: |
         hatch env run --env test.py${{ matrix.python-version }}-${{ matrix.numpy-version }}-${{ matrix.dependency-set }} run
+
+  test-upstream-and-min-deps:
+    name: py=${{ matrix.python-version }}-${{ matrix.dependency-set }}
+
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        python-version: ['3.11', "3.13"]
+        dependency-set: ["upstream", "min_deps"]
+        exclude:
+          - python-version: "3.13"
+            dependency-set: min_deps
+          - python-version: "3.11"
+            dependency-set: upstream
+    steps:
+    - uses: actions/checkout@v4
+    - name: Set up Python
+      uses: actions/setup-python@v5
+      with:
+        python-version: ${{ matrix.python-version }}
+        cache: 'pip'
+    - name: Install Hatch
+      run: |
+        python -m pip install --upgrade pip 
+        pip install hatch
+    - name: Set Up Hatch Env
+      run: |
+        hatch env create ${{ matrix.dependency-set }}
+        hatch env run -e ${{ matrix.dependency-set }} list-env
+    - name: Run Tests
+      run: |
+        hatch env run --env ${{ matrix.dependency-set }} run

.github/workflows/test.yml

@@ -7,7 +7,7 @@ default_language_version:
   python: python3
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.6.9
+    rev: v0.7.2
     hooks:
     - id: ruff
       args: ["--fix", "--show-fixes"]
@@ -22,7 +22,7 @@ repos:
     hooks:
     - id: check-yaml
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.11.2
+    rev: v1.13.0
     hooks:
       - id: mypy
         files: src|tests
@@ -37,8 +37,6 @@ repos:
           - universal-pathlib
           # Tests
           - pytest
-          # Zarr v2
-          - types-redis
   - repo: https://github.com/scientific-python/cookie
     rev: 2024.08.19
     hooks:

.pep8speaks.yml

@@ -72,7 +72,7 @@ that implements the `AbstractFileSystem` API,
 .. code-block:: python
 
    >>> import zarr
-   >>> store = zarr.storage.RemoteStore("gs://foo/bar", mode="r")
+   >>> store = zarr.storage.RemoteStore.from_url("gs://foo/bar", mode="r")
    >>> zarr.open(store=store)
    <Array <RemoteStore(GCSFileSystem, foo/bar)> shape=(10, 20) dtype=float32>