Merge branch 'main' into feat-fsspecstore-bulk-delete

Author: jhamman

.github/workflows/test.yml

@@ -60,7 +60,12 @@ jobs:
         hatch env run -e test.py${{ matrix.python-version }}-${{ matrix.numpy-version }}-${{ matrix.dependency-set }} list-env
     - name: Run Tests
       run: |
-        hatch env run --env test.py${{ matrix.python-version }}-${{ matrix.numpy-version }}-${{ matrix.dependency-set }} run
+        hatch env run --env test.py${{ matrix.python-version }}-${{ matrix.numpy-version }}-${{ matrix.dependency-set }} run-coverage
+    - name: Upload coverage
+      uses: codecov/codecov-action@v5
+      with:
+        token: ${{ secrets.CODECOV_TOKEN }}
+        verbose: true # optional (default = false)
 
   test-upstream-and-min-deps:
     name: py=${{ matrix.python-version }}-${{ matrix.dependency-set }}

.pre-commit-config.yaml

@@ -6,7 +6,7 @@ ci:
 default_stages: [pre-commit, pre-push]
 repos:
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.8.2
+    rev: v0.8.6
     hooks:
     - id: ruff
       args: ["--fix", "--show-fixes"]
@@ -22,7 +22,7 @@ repos:
     - id: check-yaml
     - id: trailing-whitespace
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.13.0
+    rev: v1.14.1
     hooks:
       - id: mypy
         files: src|tests

codecov.yml

@@ -0,0 +1,10 @@
+coverage:
+  status:
+    patch:
+      default:
+        target: auto
+    project:
+      default:
+        target: auto
+        threshold: 0.1
+comment: false

docs/conf.py

@@ -71,7 +71,7 @@ def skip_submodules(
       ) -> bool:
     # Skip documenting zarr.codecs submodules
     # codecs are documented in the main zarr.codecs namespace
-    if what == "module" and name.startswith("zarr.codecs."):
+    if what == "module" and name.startswith("zarr.codecs.") or name.startswith("zarr.core"):
         skip = True
     return skip
 
@@ -91,7 +91,7 @@ def skip_submodules(
 
 # General information about the project.
 project = "zarr"
-copyright = "2024, Zarr Developers"
+copyright = "2025, Zarr Developers"
 author = "Zarr Developers"
 
 version = get_version("zarr")
@@ -105,10 +105,10 @@ def skip_submodules(
      "license": "https://github.com/zarr-developers/zarr-python/blob/main/LICENSE.txt",
      "tutorial": "user-guide",
      "getting-started": "quickstart",
-     "release": "developers/release.html",
      "roadmap": "developers/roadmap.html",
      "installation": "user-guide/installation.html",
-     "api": "api/zarr/index"
+     "api": "api/zarr/index",
+     "release": "release-notes"
 }
 
 # The language for content autogenerated by Sphinx. Refer to documentation
@@ -181,6 +181,7 @@ def skip_submodules(
     ],
     "collapse_navigation": True,
     "navigation_with_keys": False,
+    "announcement": "Zarr-Python 3 is here! Check out the release announcement <a href='https://zarr.dev/blog/zarr-python-3-release/'>here.</a>",
 }
 
 # Add any paths that contain custom themes here, relative to this directory.

docs/developers/contributing.rst

@@ -213,7 +213,7 @@ and functions are included in the API documentation, under the ``docs/api`` fold
 using the `autodoc <https://www.sphinx-doc.org/en/master/usage/extensions/autodoc.html>`_
 extension to sphinx. Any new features or important usage information should be included in the
 user-guide (``docs/user-guide``). Any changes should also be included in the release
-notes (``docs/developers/release.rst``).
+notes (``docs/release-notes.rst``).
 
 The documentation can be built locally by running::
 

docs/developers/index.rst

@@ -6,5 +6,4 @@ Developer's Guide
     :maxdepth: 1
 
     contributing
-    release
     roadmap