linting, new black introduces new linting

Signed-off-by: Nick Papior <nickpapior@gmail.com>

Author: zerothi

src/sisl/_category.py

@@ -103,6 +103,7 @@ def __call__(cls, *args, **kwargs):
 @set_module("sisl.category")
 class Category(metaclass=CategoryMeta):
     r"""A category"""
+
     __slots__ = ("_name", "_wrapper")
 
     def __init__(self, name=None):
@@ -297,6 +298,7 @@ def is_class(cls, name):
 @set_module("sisl.category")
 class NullCategory(GenericCategory):
     r"""Special Null class which always represents a classification not being *anything*"""
+
     __slots__ = tuple()
 
     def __init__(self):

src/sisl/_dispatch_class.py

@@ -18,6 +18,7 @@ class A(_Dispatchs,
 A.new.register ..
 A.hello.register ..
 """
+
 import logging
 from collections import namedtuple
 from typing import Any, Optional, Sequence, Union

src/sisl/geom/_composite.py

@@ -15,12 +15,12 @@
 @dataclass
 class CompositeGeometrySection:
     @abstractmethod
-    def build_section(self, previous: Geometry) -> Geometry:
-        ...
+    def build_section(self, previous: Geometry) -> Geometry: ...
 
     @abstractmethod
-    def add_section(self, geometry: Geometry, geometry_addition: Geometry) -> Geometry:
-        ...
+    def add_section(
+        self, geometry: Geometry, geometry_addition: Geometry
+    ) -> Geometry: ...
 
     def _junction_error(self, prev, msg, what):
         """Helper function to raise an error if the junction is not valid.

src/sisl/geom/category/_coord.py

@@ -54,6 +54,7 @@ class AtomFracSite(AtomCategory):
     ...    else:
     ...        assert c == B_site
     """
+
     __slots__ = (
         f"_{a}" for a in ("cell", "icell", "length", "atol", "offset", "foffset")
     )
@@ -159,6 +160,7 @@ class AtomXYZ(AtomCategory):
             AtomXYZ.fx < 3 == AtomXYZ.fx(None, 3) == AtomXYZ(f_x=(None, 3)) == AtomXYZ(f_x_lt=3)
 
     """
+
     __slots__ = ("_coord_check",)
 
     def __init__(self, *args, **kwargs):

src/sisl/geom/category/_kind.py

@@ -26,6 +26,7 @@ class AtomZ(AtomCategory):
     Z : int or array_like
        atomic number match for several values this is equivalent to AND
     """
+
     __slots__ = ("_Z",)
 
     def __init__(self, Z):
@@ -62,6 +63,7 @@ class AtomTag(AtomCategory):
     tag : str
        The tag you want atoms to match. It can be a regex expression.
     """
+
     __slots__ = ("_compiled_re", "_re")
 
     def __init__(self, tag):
@@ -113,6 +115,7 @@ class AtomIndex(AtomCategory):
     >>> aidx = AtomIndex(mod=3) # [1, 2, 4, 5, ...]: range(na) - range(0, na, 3)
     >>> geom.sub(aidx) == geom.sub(range(0, len(geom), 3))
     """
+
     __slots__ = ("_op_val",)
 
     def __init__(self, *args, **kwargs):
@@ -272,6 +275,7 @@ def __eq__(self, other):
 
 class AtomEven(AtomCategory):
     r"""Classify atoms based on indices (even in this case)"""
+
     __slots__ = []
 
     def __init__(self):
@@ -291,6 +295,7 @@ def __eq__(self, other):
 @set_module("sisl.geom")
 class AtomOdd(AtomCategory):
     r"""Classify atoms based on indices (odd in this case)"""
+
     __slots__ = []
 
     def __init__(self):

src/sisl/geom/category/_neighbours.py

@@ -38,6 +38,7 @@ class AtomNeighbours(AtomCategory):
     >>> AtomNeighbours(4, R=(1, 1.44)) # 4 neighbours within (1, Geometry.maxR())
     >>> AtomNeighbours(4, R=lambda atom: (0.01, PeriodicTable().radius(atom.Z))) # 4 neighbours within (0.01, <>)
     """
+
     __slots__ = ("_min", "_max", "_in", "_R")
 
     def __init__(self, *args, **kwargs):

src/sisl/io/siesta/binaries.py

@@ -2561,9 +2561,7 @@ def _type(name, obj, dic=None):
     )
     add_sile(
         "RHOINIT",
-        _type(
-            "rhoinitSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}
-        ),
+        _type("rhoinitSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}),
     )
     add_sile(
         "RHOXC",
@@ -2583,9 +2581,7 @@ def _type(name, obj, dic=None):
     )
     add_sile(
         "TOCH",
-        _type(
-            "totalrhoSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}
-        ),
+        _type("totalrhoSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}),
     )
     # The following two files *require* that
     #  STM.DensityUnits   Ele/bohr**3
@@ -2597,9 +2593,7 @@ def _type(name, obj, dic=None):
     )
     add_sile(
         "STM.LDOS",
-        _type(
-            "stmldosSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}
-        ),
+        _type("stmldosSileSiesta", _gridSileSiesta, {"grid_unit": 1.0 / _Bohr2Ang**3}),
     )
     add_sile("VH", _type("hartreeSileSiesta", _gridSileSiesta, {"grid_unit": _Ry2eV}))
     add_sile(

src/sisl/io/tbtrans/se.py

@@ -62,6 +62,7 @@ class tbtsencSileTBtrans(_devncSileTBtrans):
     >>> np.allclose(Hdev_pvt, Hdev[pvt_dev, pvt_dev.T])
     True
     """
+
     _trans_type = "TBT"
     _E2eV = Ry2eV
 

src/sisl/io/tbtrans/tbt.py

@@ -130,6 +130,7 @@ class tbtncSileTBtrans(_devncSileTBtrans):
     The API for this class are largely equivalent to the arguments of the `sdata` command-line
     tool, with the execption that the command-line tool uses Fortran indexing numbers (1-based).
     """
+
     _trans_type = "TBT"
     _E2eV = Ry2eV
 

src/sisl/mixing/base.py

@@ -36,6 +36,7 @@
 @set_module("sisl.mixing")
 class BaseMixer:
     r"""Base class mixer"""
+
     __slots__ = ()
 
     @abstractmethod
@@ -117,6 +118,7 @@ def __str__(self) -> str:
 @set_module("sisl.mixing")
 class BaseWeightMixer(BaseMixer):
     r"""Base class mixer"""
+
     __slots__ = ("_weight",)
 
     def __init__(self, weight: TypeWeight = 0.2):
@@ -142,6 +144,7 @@ def set_weight(self, weight: TypeWeight):
 @set_module("sisl.mixing")
 class BaseHistoryWeightMixer(BaseWeightMixer):
     r"""Base class mixer with history"""
+
     __slots__ = ("_history",)
 
     def __init__(self, weight: TypeWeight = 0.2, history: TypeArgHistory = 0):