fix codespell

Author: zhichen3

Exec/science/xrb_spherical/analysis/slice.py

@@ -86,7 +86,7 @@ def slice(fnames:List[str], fields:List[str],
 
             center = centers[loc]
         else:
-            # If theta is provided explicitely, then assume this is the theta corresponding to
+            # If theta is provided explicitly, then assume this is the theta corresponding to
             # flame front. Then keep the front at ~0.7 of the plotting width.
 
             # Determine dtheta that displaces from center to ~0.7 of the plotting domain

…c/science/xrb_spherical/inputs.He.1000Hz …nce/xrb_spherical/inputs.He.45deg.1000HzExec/science/xrb_spherical/inputs.He.1000Hz renamed to Exec/science/xrb_spherical/inputs.He.45deg.1000Hz Exec/science/xrb_spherical/inputs.He.1000Hz renamed to Exec/science/xrb_spherical/inputs.He.45deg.1000Hz

@@ -6,16 +6,16 @@ stop_time =  3.0
 geometry.is_periodic = 0       0
 geometry.coord_sys   = 2                  # 0 => cart, 1 => RZ  2=>spherical
 geometry.prob_lo     = 1.1e6           0
-geometry.prob_hi     = 1.13072e6       3.141592653589793
-amr.n_cell           = 768            2304  #192             1152
+geometry.prob_hi     = 1.13072e6       0.785398   # pi/4
+amr.n_cell           = 1536            43200     #This achieves 20cm res in both radial and theta dir
 
 # >>>>>>>>>>>>>  BC FLAGS <<<<<<<<<<<<<<<<
 # 0 = Interior           3 = Symmetry
 # 1 = Inflow             4 = SlipWall
 # 2 = Outflow            5 = NoSlipWall
 # >>>>>>>>>>>>>  BC FLAGS <<<<<<<<<<<<<<<<
 castro.lo_bc       =  3   3   # Inflow in lower R and Symmetry across Theta
-castro.hi_bc       =  2   3   # Outflow in upper boundaries
+castro.hi_bc       =  2   2   # Outflow in upper boundaries
 
 # Allow non-square zones
 castro.allow_non_unit_aspect_zones = 1
@@ -56,8 +56,8 @@ castro.rotation_include_centrifugal = 0
 castro.diffuse_temp = 1
 castro.diffuse_cutoff_density_hi = 5.e4
 castro.diffuse_cutoff_density = 2.e4
-
 castro.diffuse_cond_scale_fac = 1.0
+castro.diffuse_use_amrex_mlmg = 0
 
 castro.react_rho_min = 1.e2
 castro.react_rho_max = 1.5e7
@@ -96,15 +96,15 @@ amr.n_error_buf     = 2 2 2 2 # number of buffer cells in error est
 
 # CHECKPOINT FILES
 amr.check_file      = xrb_spherical_1000Hz_chk        # root name of checkpoint file
-amr.check_int       = 250        # number of timesteps between checkpoints
+amr.check_int       = 50000        # number of timesteps between checkpoints
 
 # PLOTFILES
 amr.plot_file        = xrb_spherical_1000Hz_plt        # root name of plotfile
 amr.plot_per         = 5.e-3      # number of seconds between plotfiles
 amr.derive_plot_vars = ALL
 
 amr.small_plot_file         = xrb_spherical_1000Hz_smallplt        # root name of plotfile
-amr.small_plot_per          = 1.e-6 #1.e-4      # number of seconds between plotfiles
+amr.small_plot_per          = 1.e-4      # number of seconds between plotfiles
 amr.small_plot_vars = density Temp
 amr.derive_small_plot_vars = abar x_velocity y_velocity z_velocity enuc
 
@@ -121,7 +121,7 @@ problem.T_hi = 2.e8
 problem.T_lo   = 8.e6
 
 problem.H_star = 2000.e0
-problem.atm_delta  = 400.0     #50.0
+problem.atm_delta  = 50.0
 
 problem.fuel1_name = "helium-4"
 problem.fuel1_frac = 1.0e0

Exec/science/xrb_spherical/inputs.He.plane.1000Hz

@@ -7,7 +7,7 @@ geometry.is_periodic = 0       0
 geometry.coord_sys   = 2                  # 0 => cart, 1 => RZ  2=>spherical
 geometry.prob_lo     = 1.1e6           0
 geometry.prob_hi     = 1.13072e6       0.17
-amr.n_cell           = 1536            9360  #This acheives 20cm res in both radial and theta dir
+amr.n_cell           = 1536            9360  #This achieves 20cm res in both radial and theta dir
 
 # >>>>>>>>>>>>>  BC FLAGS <<<<<<<<<<<<<<<<
 # 0 = Interior           3 = Symmetry
@@ -56,8 +56,8 @@ castro.rotation_include_centrifugal = 0
 castro.diffuse_temp = 1
 castro.diffuse_cutoff_density_hi = 5.e4
 castro.diffuse_cutoff_density = 2.e4
-
 castro.diffuse_cond_scale_fac = 1.0
+castro.diffuse_use_amrex_mlmg = 0
 
 castro.react_rho_min = 1.e2
 castro.react_rho_max = 1.5e7