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Data Description

DNA (WGS_trimmed_data)

File name Size Platform Detail
SRR6037732_scaffold_11.fq 1534M PacBio Musang King fruit stalk (D1) https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR6037732
SRR6058604_scaffold_11.1P.fastq 313M length=151 Illumina Musang King fruit stalk (D1): Forward paired read https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR6058604
SRR6058604_scaffold_11.1U.fastq 1M Illumina Forward unique reads
SRR6058604_scaffold_11.2P.fastq 338M Illumina Reverse paired read
SRR6058604_scaffold_11.2U.fastq 1M Illumina Reverse unique reads

RNA raw data

File name Size Platform Detail
SRR6040095_scaffold_11.1.fastq 109M Illumina Musang King: aril 1 https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR6040095
SRR6040095_scaffold_11.2.fastq 105M Illumina Musang King: aril 1

RNA trimmed data

File name Size Platform Detail
SRR6040092_scaffold_11.1.fastq 70M Illumina Musang King: leaf https://trace.ncbi.nlm.nih.gov/Traces/sra/?run=SRR6040092
SRR6040092_scaffold_11.2.fastq 68M Illumina Musang King: leaf
SRR6040093_scaffold_11.1.fastq 62M Illumina Musang King: root
SRR6040093_scaffold_11.2.fastq 63M Illumina Musang King: root
SRR6040094_scaffold_11.1.fastq 99M Illumina Musang King: aril 2
SRR6040094_scaffold_11.2.fastq 96M Illumina Musang King: aril 2
SRR6040096_scaffold_11.1.fastq 99M Illumina Musang King: stem
SRR6040096_scaffold_11.2.fastq 96M Illumina Musang King: stem
SRR6040097_scaffold_11.1.fastq 39M Illumina Musang King: aril 3
SRR6040097_scaffold_11.2.fastq 37M Illumina Musang King: aril 3
SRR6156066_scaffold_11.1fastq 57M Illumina Monthong: aril 2
SRR6156066_scaffold_11.2.fastq 78M Illumina Monthong: aril 2
SRR6156067_scaffold_11.1.fastq 42M Illumina Monthong: aril 3]
SRR6156067_scaffold_11.2.fastq 41M Illumina Monthong: aril 3
SRR6156069_scaffold_11.1.fastq 65M Illumina Monthong: aril 1
SRR6156069_scaffold_11.2.fastq 59M Illumina Monthong: aril 1

Output of 01_PacBio_genome_assembly

--Summary saved in 'durian.report'.

--

--Sequences saved:

-- Contigs -> 'durian.contigs.fasta'

-- Unassembled -> 'durian.unassembled.fasta'

-- Unitigs -> 'durian.unitigs.fasta'

--

--Read layouts saved:

-- Contigs -> 'durian.contigs.layout'.

-- Unitigs -> 'durian.unitigs.layout'.

--

--Graphs saved:

-- Contigs -> 'durian.contigs.gfa'.

-- Unitigs -> 'durian.unitigs.gfa'.