Merge branch 'development' into subch_clip

Author: zingale

.github/workflows/check-ifdefs.yml

@@ -8,13 +8,11 @@ jobs:
 
     steps:
       - uses: actions/checkout@v6
-        with:
-          fetch-depth: 0
 
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
 
       - name: Run check-ifdefs
         run: |

.github/workflows/check-makefiles.yml

@@ -15,15 +15,13 @@ jobs:
 
     steps:
       - uses: actions/checkout@v6
-        with:
-          fetch-depth: 0
 
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
 
-      - name: Run check-ifdefs
+      - name: Run check_makefiles
         run: |
           python .github/workflows/check_makefiles.py
 

.github/workflows/check-params.yml

@@ -15,8 +15,6 @@ jobs:
 
     steps:
       - uses: actions/checkout@v6
-        with:
-          fetch-depth: 0
 
       - name: Get submodules
         run: |
@@ -30,7 +28,7 @@ jobs:
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
 
       - name: Run check-params
         run: |

.github/workflows/codespell.yml

@@ -8,13 +8,11 @@ jobs:
 
     steps:
       - uses: actions/checkout@v6
-        with:
-          fetch-depth: 0
 
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
           cache: "pip"
 
       - name: Install dependencies

.github/workflows/docs-test.yml

@@ -12,16 +12,15 @@ jobs:
 
     steps:
       - uses: actions/checkout@v6
-        with:
-          fetch-depth: 0
+
       - name: Install pandoc and doxygen
         run: |
           sudo apt install pandoc doxygen
 
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
           cache: "pip"
 
       - name: Install dependencies

.github/workflows/gh-pages.yml

@@ -20,7 +20,7 @@ jobs:
       - name: Setup Python
         uses: actions/setup-python@v6
         with:
-          python-version: '3.11'
+          python-version: '3.14'
           cache: "pip"
 
       - name: Upgrade pip

CHANGES.md

@@ -1,3 +1,31 @@
+# 26.02
+
+  * update CI due to Microphysics optimizations (#3189, #3203)
+
+  * `Detonation` : fix plotting script for mass fractions (#3200)
+
+  * fix make flags in ``job_info`` (#3195)
+
+  * fix radiation compilation due to ``Array4`` changes (#3198)
+
+  * ``xrb_spherical`` : fix ash field in plot output
+
+  * cppcheck fixes
+
+  * update to C++20 (#3097)
+
+  * optimization and cleaning of ``check_for_negative_density`` (#3191)
+
+  * diffusion optimization and modernization (#3192)
+
+  * optimize a divide in SDC react (#3194)
+
+  * optimize the transverse flux correction in CTU hydro (#3181)
+
+  * ``massive_star`` : add another 3D visualization script
+
+  * optimize ``ambient_fill` (#3190)
+
 # 26.01
 
   * `massive_star` : add volume-rendering scripts (#3186)

Docs/source/_static/theme_overrides.css

@@ -34,7 +34,7 @@ div#example-notebook div.highlight-default div.highlight {
 
 .wy-side-nav-search>div.branch{
     font-weight:normal;
-    color:rgba(255,255,255,0.3);
+    color:rgba(255,255,255);
     font-size:100%;
     display:inline-block;
     padding:4px 6px;
@@ -47,4 +47,25 @@ div#example-notebook div.highlight-default div.highlight {
     margin-bottom:.809em; */
     color:#fcfcfc;
     font-weight:bold;
-}
+}
+
+/* Underline links everywhere */
+.wy-nav-content a {
+    text-decoration: underline;
+    text-decoration-style: dotted;
+    text-underline-offset: 0.15em;
+}
+
+/* Left sidebar navigation links */
+.wy-menu a {
+    text-decoration-line: underline;
+    text-decoration-style: dotted;
+    text-underline-offset: 0.15em;
+}
+
+.wy-side-nav-search a {
+    text-decoration-line: underline;
+    text-decoration-style: dotted;
+    text-underline-offset: 0.15em;
+}
+

Docs/source/conf.py

@@ -60,6 +60,7 @@ def get_version():
               'sphinx_copybutton',
               'sphinx_prompt',
               'breathe',
+              'sphinx_rtd_theme_ext_color_contrast',
               'IPython.sphinxext.ipython_console_highlighting']
 
 # bibtex

Exec/Make.auto_source

@@ -150,6 +150,9 @@ ifeq ($(USE_CUDA), TRUE)
 endif
 
 clean_flags := $(filter-out --jobserver%,$(MAKEFLAGS))
+ifeq ($(strip $(clean_flags)),)
+  clean_flags = $(MAKEOVERRIDES)
+endif
 
 $(objEXETempDir)/AMReX_buildInfo.o: .FORCE
 	@if [ ! -d $(objEXETempDir) ]; then mkdir -p $(objEXETempDir); fi