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README.md

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## Installation
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Install Miniconda or Mambaforge in your computer.
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Install [Miniforge](https://github.com/conda-forge/miniforge?tab=readme-ov-file#miniforge) in your computer (which contains [`mamba`](https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html#).
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Clone this repository locally (we recommend using [Github Desktop](https://desktop.github.com/)).
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Clone this repository locally (for example using [Github Desktop](https://desktop.github.com/)).
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From a command line prompt, navigate to where you cloned this repository locally (for example by typing `cd Lifetime-Unmixing`) and create this specific conda environment by typing the following line:
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From a command line prompt, navigate to where you cloned this repository locally (for example by typing `cd Lifetime-Unmixing`) and create a specific conda environment by typing the following line:
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```bash
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conda env create -f env.yml
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mamba env create -f env.yml
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```
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## Usage
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From a terminal, activate the conda environment with:
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```bash
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conda activate lifetime-env
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mamba activate lifetime-env
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```
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Then open jupyter lab or your prefered IDE (for example VSCode) and run the code of interest from the "code" folder. Remember to replace the data path with your local path to the images.
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Then open [jupyter lab](https://jupyter.org/) or your prefered IDE (for example VSCode, Pycharm, etc) and run the code of interest from the "code" folder. Remember to replace the data path with your local path to the images.
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We recommend running this code on a powerful workstation, preferably with > 48GB RAM and a GPU.
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## Acknowledgements
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To be added

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