diff --git a/docs/README.md b/docs/README.md index 66c9638..0f60961 100644 --- a/docs/README.md +++ b/docs/README.md @@ -6,7 +6,7 @@ This directory contains the Sphinx documentation for Φ-Down. 1. Install documentation dependencies: ```bash - pip install -r requirements.txt + python3 -m pip install -r requirements.txt ``` 2. Build the documentation: @@ -26,13 +26,14 @@ This directory contains the Sphinx documentation for Φ-Down. - `getting_started.rst` - Getting started guide - `installation.rst` - Installation instructions - `user_guide.rst` - Comprehensive user guide + - `ais_guide.rst` - AIS data download and filtering guide + - `burst_mode.rst` - Sentinel-1 burst search and download guide - `api_reference.rst` - API reference - `examples.rst` - Code examples - `contributing.rst` - Contributing guidelines - `changelog.rst` - Version history - `conf.py` - Sphinx configuration - `_static/` - Static files (CSS, images) - - `_templates/` - Custom templates - `build/` - Generated documentation (HTML) @@ -46,7 +47,7 @@ The documentation uses the Read the Docs theme with custom styling for PhiLab br ## API Documentation -API documentation is automatically generated using Sphinx AutoAPI from the Python source code docstrings. The configuration is in `conf.py`. +API documentation is generated with Sphinx AutoAPI from the Python source tree configured in `source/conf.py`. ## Contributing to Documentation diff --git a/docs/requirements.txt b/docs/requirements.txt index db2a2f9..997a328 100644 --- a/docs/requirements.txt +++ b/docs/requirements.txt @@ -1,7 +1,7 @@ # Documentation requirements for Sphinx -sphinx>=8.0.0 -sphinx-rtd-theme>=3.0.0 -sphinx-autodoc-typehints>=2.0.0 -myst-parser>=4.0.0 +sphinx>=7.0.0,<8.0.0 +sphinx-rtd-theme>=1.3.0,<4.0.0 +sphinx-autodoc-typehints>=1.24.0,<3.0.0 +myst-parser>=3.0.0,<4.0.0 sphinx-copybutton>=0.5.0 -sphinx-autoapi>=3.0.0 +sphinx-autoapi>=2.5.0,<4.0.0 diff --git a/docs/source/burst_mode.rst b/docs/source/burst_mode.rst index e674658..49ea43c 100644 --- a/docs/source/burst_mode.rst +++ b/docs/source/burst_mode.rst @@ -134,7 +134,7 @@ The simplest burst search uses only temporal filters: Example 2: Burst Search with Spatial Filter (AOI) ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ -Combine burst mode with spatial filtering using a WKT polygon: +Combine burst mode with spatial filtering using a supported WKT geometry such as a polygon: .. code-block:: python @@ -389,7 +389,7 @@ Use AOI with swath/polarization filters to get bursts covering your study area: searcher.query_by_filter( burst_mode=True, - aoi_wkt=your_polygon_wkt, + aoi_wkt=your_aoi_wkt, swath_identifier='IW2', polarisation_channels='VV', start_date='2024-08-01T00:00:00', diff --git a/docs/source/changelog.rst b/docs/source/changelog.rst index bfdf659..d493362 100644 --- a/docs/source/changelog.rst +++ b/docs/source/changelog.rst @@ -3,9 +3,75 @@ Changelog This document tracks all notable changes to Φ-Down. +.. note:: + + The package metadata currently reports version ``0.1.25``. The changelog + entries below have not yet been backfilled for every patch release after + ``0.1.22``. + The format is based on `Keep a Changelog `_, and this project adheres to `Semantic Versioning `_. +[Unreleased] +------------ + +*(None)* + +### Added +- *(reserved for future release notes)* + +[0.1.26] - 2026-03-15 +--------------------- + +### Added +- ``query_by_filter(skip=...)`` for manual page offsets when fetching a single result page at a time +- ``mode="fast"`` and ``mode="safe"`` for product downloads in the Python API and CLI +- Native resumable product download support with persisted state tracking and dedicated tests +- Enhanced retry behavior in safe mode with automatic exponential backoff and clear progress messages: + + * 🔄 Attempt indicators showing current/total attempts + * ⚠️ Retry warnings with countdown timers before next attempt + * ✅ Success confirmation messages + * ❌ Failure summaries after exhausting all retries + +- Support for additional AOI WKT geometry types across search helpers and footprint visualization + + .. code-block:: python + + from phidown.search import CopernicusDataSearcher + + filters = dict( + collection_name="SENTINEL-1", + product_type="GRD", + start_date="2024-01-01T00:00:00", + end_date="2024-01-31T23:59:59", + top=20, + ) + + searcher = CopernicusDataSearcher() + searcher.query_by_filter(**filters, skip=0) + page_1 = searcher.execute_query() + + searcher.query_by_filter(**filters, skip=20) + page_2 = searcher.execute_query() + + # Use `skip` when a frontend needs one page at a time. + # `count=True` still performs eager multi-page retrieval and cannot be combined with `skip`. + +### Changed + - Documented manual pagination examples in Sphinx guides +- Clarified that ``count=True`` still performs eager multi-page retrieval and cannot be combined with ``skip`` +- ``fast`` mode now prefers the ``s5cmd`` transfer path, while ``safe`` mode uses native resumable downloads +- CLI and user guides now document ``--mode`` as the primary download selector and treat ``--robust`` / ``--resume-mode`` as compatibility paths +- Download state files are now stored in ``.phidown/download_state.json`` subdirectory to keep metadata separate from downloaded products + +### Fixed +- Resolved a download mode precedence bug where ``resume_mode='off'`` could override + an explicitly provided ``mode='safe'``, causing downloads to run in non-resumable + ``fast`` mode unexpectedly. +- Product footprint plotting now accepts non-polygon AOIs that are valid in the search API +- Download retries no longer re-prompt credentials on every attempt when ``--reset`` is used + [0.1.22] - 2025-10-18 --------------------- diff --git a/docs/source/cli.rst b/docs/source/cli.rst index a78175f..ff4975f 100644 --- a/docs/source/cli.rst +++ b/docs/source/cli.rst @@ -1,78 +1,11 @@ .. _cli: -=========================================== -Command-Line Interface (CLI) -=========================================== +======================== +Command-Line Interface +======================== -**NEW:** Φ-Down includes a command-line interface for download, product listing, and burst coverage analysis directly from your terminal. - -Overview -======== - -The ``phidown`` CLI provides a convenient way to work with Earth Observation products without writing Python code. It supports: - -- Download by product name -- Download by S3 path -- Product listing over AOI/date filters -- Sentinel-1 burst coverage analysis over AOI/date filters - -Installation -============ - -The CLI is included when you install phidown: - -.. code-block:: bash - - pip install phidown - -Prerequisites -------------- - -The CLI requires ``s5cmd`` to be installed for data downloads: - -**macOS (using Homebrew):** - -.. code-block:: bash - - brew install peak/tap/s5cmd - -**Linux/macOS (using Go):** - -.. code-block:: bash - - go install github.com/peak/s5cmd/v2@latest - -**Download binary directly:** - -Visit https://github.com/peak/s5cmd/releases and download the appropriate binary for your system. - -**Verify installation:** - -.. code-block:: bash - - s5cmd version - -Quick Start -=========== - -After installation, you can use the ``phidown`` command directly: - -.. code-block:: bash - - # Download by product name - phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data - - # Download by S3 path - phidown --s3path /eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/... -o ./data - - # List products over area and dates - phidown --list --collection SENTINEL-1 --product-type GRD --bbox -5 40 5 45 --start-date 2024-01-01T00:00:00 --end-date 2024-01-31T23:59:59 - - # Burst coverage analysis over area and dates - phidown --burst-coverage --bbox -5 40 5 45 --start-date 2024-08-02T00:00:00 --end-date 2024-08-15T23:59:59 --polarisation VV --format json - -Command-Line Options -==================== +Phi-Down ships with a CLI for downloads, product listing, and Sentinel-1 burst +coverage analysis. Basic Usage ----------- @@ -80,433 +13,145 @@ Basic Usage .. code-block:: text phidown [OPTIONS] + phidown list [OPTIONS] -Required Arguments (choose one) --------------------------------- - -``--name NAME`` - Product name to download (e.g., ``S1A_IW_GRDH_1SDV_...``) - - Example: - - .. code-block:: bash - - phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data - -``--s3path S3PATH`` - S3 path to download (must start with ``/eodata/``) - - Example: - - .. code-block:: bash - - phidown --s3path /eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/S1A_IW_GRDH_1SDV.SAFE -o ./data - -``--list`` - List products using AOI/date filters - -``--burst-coverage`` - Analyze Sentinel-1 burst coverage over AOI/date range - -Optional Arguments ------------------- - -``-o, --output-dir OUTPUT_DIR`` - Output directory for downloaded data (default: current directory) - - Example: - - .. code-block:: bash - - phidown --name PRODUCT_NAME -o /data/sentinel1 - -``-c, --config-file CONFIG_FILE`` - Path to s5cmd configuration file (default: ``.s5cfg``) - - Example: - - .. code-block:: bash - - phidown --name PRODUCT_NAME -o ./data -c ~/.my-s5cfg - -``--reset`` - Reset configuration file and prompt for new credentials - - Example: - - .. code-block:: bash - - phidown --name PRODUCT_NAME -o ./data --reset - -``--no-progress`` - Disable progress bar during download - - Example: - - .. code-block:: bash - - phidown --name PRODUCT_NAME -o ./data --no-progress - -``--no-download-all`` - Download specific file instead of entire directory (for S3 path only) - - Example: - - .. code-block:: bash - - phidown --s3path /eodata/Sentinel-1/SAR/.../file.tiff -o ./data --no-download-all - -``-v, --verbose`` - Enable verbose output - - Example: - - .. code-block:: bash - - phidown --name PRODUCT_NAME -o ./data -v - -``--version`` - Show program's version number and exit - -``-h, --help`` - Show help message and exit - -Listing and Analysis Filters ----------------------------- - -``--collection COLLECTION`` - Collection for ``--list`` (default: ``SENTINEL-1``) - -``--product-type PRODUCT_TYPE`` - Product type for ``--list`` (e.g., ``GRD``, ``SLC``, ``S2MSI1C``) - -``--orbit-direction {ASCENDING,DESCENDING}`` - Orbit direction for ``--list`` and ``--burst-coverage`` - -``--cloud-cover CLOUD_COVER`` - Cloud cover threshold for ``--list`` (0-100) - -``--aoi-wkt AOI_WKT`` - AOI as WKT POLYGON for ``--list`` or ``--burst-coverage`` - -``--bbox MIN_LON MIN_LAT MAX_LON MAX_LAT`` - AOI as bounding box for ``--list`` or ``--burst-coverage`` - -``--start-date START_DATE`` and ``--end-date END_DATE`` - ISO 8601 date filters for ``--list`` and ``--burst-coverage`` - -``--top TOP`` - Max number of products for ``--list`` (default: ``50``) - -``--order-by ORDER_BY`` - Sorting expression for ``--list`` (default: ``ContentDate/Start desc``) - -``--polarisation {VV,VH,HH,HV}`` - Polarisation for ``--burst-coverage`` (default: ``VV``) - -``--relative-orbit-number RELATIVE_ORBIT_NUMBER`` - Optional relative orbit filter for ``--burst-coverage`` - -``--preferred-subswath PREFERRED_SUBSWATH`` - Comma-separated subswath preference order for ``--burst-coverage`` (e.g., ``IW1,IW2,IW3``) - -``--format {table,json,csv}`` - Output format for ``--list`` and ``--burst-coverage`` (default: ``table``) - -``--columns COLUMNS`` - Comma-separated columns to print for ``--list`` and ``--burst-coverage`` - -``--save SAVE`` - Save ``--list``/``--burst-coverage`` output to file instead of stdout - -Listing and Burst Coverage Examples -=================================== - -List products in CSV: - -.. code-block:: bash - - phidown --list --collection SENTINEL-2 --product-type S2MSI1C --bbox 10 45 12 46 --start-date 2024-05-01T00:00:00 --end-date 2024-05-31T23:59:59 --cloud-cover 20 --format csv --save ./outputs/s2_list.csv - -List products with selected columns: - -.. code-block:: bash - - phidown --list --collection SENTINEL-1 --product-type SLC --aoi-wkt "POLYGON((10 45, 12 45, 12 46, 10 46, 10 45))" --start-date 2024-08-01T00:00:00 --end-date 2024-08-31T23:59:59 --columns Name,S3Path,ContentDate,coverage +Download Commands +----------------- -Burst coverage analysis with default orbit recommendation: +Download by product name: .. code-block:: bash - phidown --burst-coverage --bbox 10 45 12 46 --start-date 2024-08-02T00:00:00 --end-date 2024-08-15T23:59:59 --polarisation VV + phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data -Burst coverage analysis with explicit orbit/subswath preferences: +Download by direct S3 path: .. code-block:: bash - phidown --burst-coverage --aoi-wkt "POLYGON((10 45, 12 45, 12 46, 10 46, 10 45))" --start-date 2024-08-02T00:00:00 --end-date 2024-08-20T23:59:59 --orbit-direction DESCENDING --relative-orbit-number 22 --preferred-subswath IW1,IW2,IW3 --format json --save ./outputs/burst_coverage.json + phidown --s3path /eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/... -o ./data -Configuration -============= +Common download options: -Credentials Setup ------------------ +* ``-o, --output-dir``: Output directory for downloaded data +* ``-c, --config-file``: Path to the ``.s5cfg`` credentials file +* ``--mode {fast,safe}``: ``fast`` uses ``s5cmd`` for throughput, ``safe`` uses resumable native downloads +* ``--no-progress``: Disable the progress bar +* ``--no-download-all``: Download a single object instead of an entire directory when using ``--s3path`` +* ``--reset``: Recreate credentials configuration -On first run, the CLI will prompt you to enter your Copernicus Data Space credentials. These will be stored in a configuration file (default: ``.s5cfg``). +``.s5cfg`` notes: -**Manual Configuration:** +* Phi-Down reads credentials from the ``[default]`` section of the specified + file. +* If ``-c`` is omitted, Phi-Down uses ``.s5cfg`` in the current working + directory. +* ``--reset`` is useful when a credential pair has expired and you want the + tool to rewrite the file interactively. +* For automation, prefer an explicit config path instead of relying on the + shell's current directory. -Create a ``.s5cfg`` file in your working directory: +Download Modes +-------------- -.. code-block:: ini +These options apply to download workflows: - [default] - aws_access_key_id = your_access_key - aws_secret_access_key = your_secret_key - aws_region = eu-central-1 - host_base = eodata.dataspace.copernicus.eu - host_bucket = eodata.dataspace.copernicus.eu - use_https = true - check_ssl_certificate = true +* ``--mode fast``: Prefer the ``s5cmd`` transfer path for maximum throughput +* ``--mode safe``: Prefer the resumable native transfer path for interruption recovery +* ``--retry-count``: Command-level retry count +* ``--state-file``: Custom JSON state file path (default: ``.phidown/download_state.json`` in output directory) +* ``--s5cmd-retry-count``: Internal retry count passed to ``s5cmd`` +* ``--max-workers``: Worker count passed to ``s5cmd`` +* ``--backoff-base`` and ``--backoff-max``: Exponential retry backoff controls -**Getting Credentials:** +Legacy compatibility options are still accepted for now: -1. Log in to https://eodata-s3keysmanager.dataspace.copernicus.eu/panel/s3-credentials -2. Create new S3 credentials -3. Copy the access key and secret key +* ``--robust``: Deprecated alias for ``--mode safe`` +* ``--resume-mode {off,product}``: Deprecated legacy resume selector -**Resetting Credentials:** +Listing Products +---------------- -Use the ``--reset`` flag to enter new credentials: +You can list products either with the subcommand form: .. code-block:: bash - phidown --name PRODUCT_NAME -o ./data --reset + phidown list --collection SENTINEL-2 --product-type S2MSI2A --bbox 10 45 12 46 --start-date 2024-05-01T00:00:00 --end-date 2024-05-31T23:59:59 -Usage Examples -============== - -Download by Product Name -------------------------- - -Download a Sentinel-1 product: +or with the main command: .. code-block:: bash - phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ~/downloads + phidown --list --collection SENTINEL-2 --product-type S2MSI2A --bbox 10 45 12 46 --start-date 2024-05-01T00:00:00 --end-date 2024-05-31T23:59:59 -Download a Sentinel-2 product: +Listing requires: -.. code-block:: bash +* One spatial filter: ``--aoi-wkt`` or ``--bbox`` +* At least one temporal filter: ``--start-date`` or ``--end-date`` - phidown --name S2A_MSIL2A_20240503T101031_N0510_R022_T32TQM_20240503T162538 -o ~/sentinel2_data +Useful listing options: -Download by S3 Path -------------------- +* ``--collection``: Collection name, default ``SENTINEL-1`` +* ``--product-type``: Product type filter +* ``--orbit-direction``: ``ASCENDING`` or ``DESCENDING`` +* ``--cloud-cover``: Optical cloud threshold +* ``--top``: Maximum number of results +* ``--order-by``: OData sort expression +* ``--format {table,json,csv}``: Output format +* ``--columns``: Comma-separated column selection +* ``--save``: Save output to a file -Download using the full S3 path: - -.. code-block:: bash +Burst Coverage Analysis +----------------------- - phidown --s3path /eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/S1A_IW_GRDH_1SDV.SAFE -o ./data - -Download a specific file from S3: +Run Sentinel-1 burst coverage analysis over an AOI and date range: .. code-block:: bash - phidown --s3path /eodata/Sentinel-1/SAR/.../measurement/file.tiff -o ./data --no-download-all - -Custom Configuration --------------------- + phidown --burst-coverage --bbox 10 45 12 46 --start-date 2024-08-02T00:00:00 --end-date 2024-08-20T23:59:59 --polarisation VV -Use a custom configuration file: +Burst coverage requires: -.. code-block:: bash +* One spatial filter: ``--aoi-wkt`` or ``--bbox`` +* Both ``--start-date`` and ``--end-date`` - phidown --name PRODUCT_NAME -o ./data -c ~/.custom-s5cfg +Useful burst options: -Download without progress bar (useful for scripts): +* ``--polarisation {VV,VH,HH,HV}`` +* ``--orbit-direction {ASCENDING,DESCENDING}`` +* ``--relative-orbit-number`` +* ``--preferred-subswath`` such as ``IW1,IW2,IW3`` +* ``--format {table,json,csv}`` +* ``--columns`` and ``--save`` -.. code-block:: bash +Examples +-------- - phidown --name PRODUCT_NAME -o ./data --no-progress - -Verbose output for debugging: +List selected columns as CSV: .. code-block:: bash - phidown --name PRODUCT_NAME -o ./data -v - -Batch Downloads ---------------- + phidown list \ + --collection SENTINEL-1 \ + --product-type SLC \ + --bbox 10 45 12 46 \ + --start-date 2024-08-01T00:00:00 \ + --end-date 2024-08-31T23:59:59 \ + --columns Name,S3Path,ContentDate \ + --format csv \ + --save ./outputs/s1_list.csv -Download multiple products using a shell script: +Run a resumable download: .. code-block:: bash - #!/bin/bash - # download_products.sh - - products=( - "S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003" - "S1A_IW_GRDH_1SDV_20240504T031926_20240504T031942_053716_068612_A45F" - "S1A_IW_GRDH_1SDV_20240505T031926_20240505T031942_053731_068629_BC21" - ) - - for product in "${products[@]}"; do - echo "Downloading $product..." - phidown --name "$product" -o ./downloads - done - -Python API -========== - -You can also use the CLI functions programmatically in your Python code: - -Download by Product Name -------------------------- - -.. code-block:: python - - from phidown import download_by_name - - success = download_by_name( - product_name='S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003', - output_dir='./downloads', - config_file='.s5cfg', - show_progress=True, - reset_config=False - ) + phidown \ + --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 \ + -o ./data \ + --mode safe - if success: - print("Download completed successfully!") - else: - print("Download failed!") - -Download by S3 Path -------------------- - -.. code-block:: python - - from phidown import download_by_s3path - - success = download_by_s3path( - s3_path='/eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/S1A_IW_GRDH_1SDV.SAFE', - output_dir='./downloads', - config_file='.s5cfg', - show_progress=True, - reset_config=False, - download_all=True - ) - -Troubleshooting -=============== - -s5cmd Not Found ---------------- - -If you see the error: - -.. code-block:: text - - ERROR:phidown.cli:❌ s5cmd is not installed or not found in PATH - -Install s5cmd following the instructions in the `Prerequisites`_ section. - -Authentication Failed ---------------------- - -If authentication fails: - -1. Verify your credentials are correct -2. Check if credentials have expired at https://eodata-s3keysmanager.dataspace.copernicus.eu/panel/s3-credentials -3. Use ``--reset`` to enter new credentials -4. Ensure your ``.s5cfg`` file format is correct - -Product Not Found ------------------ - -If a product cannot be found: - -1. Verify the product name is correct (do NOT include the ``.SAFE`` extension for product names) -2. Check that the product exists in the Copernicus Data Space catalog -3. Ensure you're using the full product name exactly as it appears in the catalog - -Download Progress Stalls -------------------------- - -If download progress appears to stall: - -1. Check your internet connection -2. Try disabling the progress bar with ``--no-progress`` -3. Use ``-v`` for verbose output to see detailed transfer information -4. Verify you have sufficient disk space - -Permission Denied ------------------ - -If you encounter permission errors: - -1. Ensure you have write permissions for the output directory -2. Check if the output directory exists and is accessible -3. Try using an absolute path for ``--output-dir`` - -Advanced Usage -============== - -Integration with Scripts ------------------------- - -The CLI is designed to work well in automated scripts and workflows: - -.. code-block:: bash - - #!/bin/bash - # Automated download script - - # Set error handling - set -e - - # Configuration - OUTPUT_DIR="/data/sentinel1" - CONFIG_FILE="~/.s5cfg" - - # Download with error handling - if phidown --name "$PRODUCT_NAME" -o "$OUTPUT_DIR" -c "$CONFIG_FILE" --no-progress; then - echo "✅ Download successful" - # Process the downloaded data - python process_data.py "$OUTPUT_DIR/$PRODUCT_NAME" - else - echo "❌ Download failed" - exit 1 - fi - -Exit Codes ----------- - -The CLI uses standard exit codes: - -- ``0``: Success -- ``1``: General error (download failed, product not found, etc.) -- ``130``: Interrupted by user (Ctrl+C) - -You can use these in scripts: +Show help and version: .. code-block:: bash - phidown --name PRODUCT_NAME -o ./data - if [ $? -eq 0 ]; then - echo "Success!" - else - echo "Failed with exit code $?" - fi - -See Also -======== - -- :doc:`installation` - Installation guide -- :doc:`user_guide` - Python API usage guide -- :doc:`examples` - More usage examples -- :doc:`api_reference` - Complete API reference - -.. _Prerequisites: #prerequisites + phidown --help + phidown --version diff --git a/docs/source/conf.py b/docs/source/conf.py index 45ea7c2..0a04098 100644 --- a/docs/source/conf.py +++ b/docs/source/conf.py @@ -15,8 +15,8 @@ project = 'Φ-Down' copyright = '2025, Roberto Del Prete' author = 'Roberto Del Prete' -release = '0.1.16' -version = '0.1.16' +release = '0.1.25' +version = '0.1.25' # -- General configuration --------------------------------------------------- # https://www.sphinx-doc.org/en/master/usage/configuration.html#general-configuration diff --git a/docs/source/contributing.rst b/docs/source/contributing.rst index bb5ab7f..3e81035 100644 --- a/docs/source/contributing.rst +++ b/docs/source/contributing.rst @@ -1,429 +1,80 @@ Contributing ============ -We welcome contributions to Φ-Down! This guide explains how to contribute to the project. - -Getting Started ---------------- - -1. **Fork the repository** on GitHub -2. **Clone your fork** locally: - - .. code-block:: bash - - git clone https://github.com/YOUR_USERNAME/phidown.git - cd phidown - -3. **Set up development environment**: - - .. code-block:: bash - - # Install PDM (recommended) - pip install pdm - - # Install development dependencies - pdm install - - # Or use pip - pip install -e .[dev,viz] - -4. **Create a feature branch**: - - .. code-block:: bash - - git checkout -b feature/your-feature-name +Contributions are welcome. Development Setup ----------------- -Development Tools -^^^^^^^^^^^^^^^^^ - -The project uses several tools for development: - -* **PDM**: Dependency management and packaging -* **pytest**: Testing framework -* **flake8**: Code linting -* **black**: Code formatting -* **mypy**: Type checking -* **pre-commit**: Git hooks for code quality - -Setting Up Pre-commit -^^^^^^^^^^^^^^^^^^^^^^ - -Install pre-commit hooks to ensure code quality: +Clone the repository and install the local environment: .. code-block:: bash - # Install pre-commit - pip install pre-commit - - # Install hooks - pre-commit install - -Virtual Environment -^^^^^^^^^^^^^^^^^^^ + git clone https://github.com/ESA-PhiLab/phidown.git + cd phidown + pdm install -Using PDM (recommended): +If you prefer ``pip``: .. code-block:: bash - pdm venv create - pdm use # Select the created environment - pdm install + pip install -e ".[dev,test,docs,viz,ais]" -Using pip: +Current Tooling +--------------- -.. code-block:: bash +The repository currently declares these core development tools: - python -m venv phidown-dev - source phidown-dev/bin/activate # On Windows: phidown-dev\\Scripts\\activate - pip install -e .[dev,viz] +* ``pytest`` and ``pytest-mock`` for tests +* ``flake8`` for linting +* Sphinx for documentation builds Running Tests ------------- -Run the test suite to ensure everything works: - .. code-block:: bash - # Run all tests pytest - - # Run with coverage - pytest --cov=phidown - - # Run specific test file - pytest tests/test_search.py - - # Run specific test - pytest tests/test_search.py::test_basic_search - -Writing Tests -^^^^^^^^^^^^^ - -* Write tests for new functionality -* Follow existing test patterns -* Use descriptive test names -* Include edge cases and error conditions - -Example test: - -.. code-block:: python - - def test_search_with_valid_parameters(): - """Test search with valid parameters returns results.""" - searcher = CopernicusDataSearcher() - results = searcher.search( - collection_name='SENTINEL-2', - start_date='2023-01-01', - end_date='2023-01-31' - ) - assert isinstance(results, pd.DataFrame) - assert len(results) >= 0 - -Code Style ----------- - -We follow Python coding standards: - -Formatting -^^^^^^^^^^ -* Use **black** for code formatting -* Line length: 88 characters -* Use double quotes for strings -* Follow PEP 8 guidelines +Run a specific file: .. code-block:: bash - # Format code - black phidown/ - - # Check formatting - black --check phidown/ + pytest tests/test_search.py Linting -^^^^^^^ - -* Use **flake8** for linting -* Fix all linting issues before submitting +------- .. code-block:: bash - # Run linting - flake8 phidown/ - - # With specific configuration - flake8 --config=.flake8 phidown/ - -Type Hints -^^^^^^^^^^ - -* Use type hints for all functions -* Use descriptive type annotations -* Follow Google docstring format - -.. code-block:: python - - def search_products( - collection_name: str, - start_date: str, - end_date: str - ) -> pd.DataFrame: - """Search for products in the given date range. - - Args: - collection_name: Name of the satellite collection - start_date: Start date in YYYY-MM-DD format - end_date: End date in YYYY-MM-DD format - - Returns: - DataFrame containing search results - - Raises: - ValueError: If date format is invalid - """ - pass + flake8 phidown tests Documentation ------------- -Writing Documentation -^^^^^^^^^^^^^^^^^^^^^ - -* Use Google-style docstrings -* Include examples in docstrings -* Update relevant documentation files -* Add type hints to docstrings - -.. code-block:: python - - def example_function(param1: str, param2: int = 10) -> bool: - """Example function with proper documentation. - - This function demonstrates the documentation style used in phidown. - - Args: - param1: Description of the first parameter - param2: Description of the second parameter. Defaults to 10. - - Returns: - True if successful, False otherwise - - Raises: - ValueError: If param1 is empty - - Example: - >>> result = example_function("test", 20) - >>> print(result) - True - """ - if not param1: - raise ValueError("param1 cannot be empty") - return True - -Building Documentation -^^^^^^^^^^^^^^^^^^^^^^ - -Build the documentation locally: +Build the docs locally from the ``docs`` directory: .. code-block:: bash cd docs + python3 -m pip install -r requirements.txt make html - - # Open in browser - open build/html/index.rst - -Submitting Changes ------------------- - -Pull Request Process -^^^^^^^^^^^^^^^^^^^^ - -1. **Update documentation** if needed -2. **Add tests** for new functionality -3. **Ensure all tests pass** -4. **Update changelog** if applicable -5. **Create pull request** with descriptive title - -Pull Request Template -^^^^^^^^^^^^^^^^^^^^^ - -Use this template for pull requests: - -:: - - ## Description - Brief description of changes made. - - ## Type of Change - - [ ] Bug fix - - [ ] New feature - - [ ] Breaking change - - [ ] Documentation update - - ## Testing - - [ ] Tests added/updated - - [ ] All tests pass - - [ ] Manual testing completed - - ## Checklist - - [ ] Code follows style guidelines - - [ ] Documentation updated - - [ ] Changelog updated (if applicable) - -Code Review -^^^^^^^^^^^ - -All changes go through code review: - -* Be responsive to feedback -* Make requested changes promptly -* Discuss disagreements constructively -* Keep PRs focused and small - -Bug Reports ------------ - -When reporting bugs: - -1. **Use the issue template** -2. **Provide clear reproduction steps** -3. **Include error messages** -4. **Specify environment details** - -Bug Report Template -^^^^^^^^^^^^^^^^^^^ - -:: - - ## Bug Description - A clear description of the bug. - - ## Reproduction Steps - 1. Step 1 - 2. Step 2 - 3. Step 3 - - ## Expected Behavior - What should happen. - - ## Actual Behavior - What actually happens. - - ## Environment - - OS: [e.g., macOS 12.0] - - Python: [e.g., 3.11] - - Phidown version: [e.g., 0.1.13] - - ## Additional Context - Any other relevant information. - -Feature Requests ----------------- - -For new features: -1. **Check existing issues** for similar requests -2. **Describe the use case** clearly -3. **Provide examples** of the desired functionality -4. **Consider implementation** complexity - -Feature Request Template -^^^^^^^^^^^^^^^^^^^^^^^^ - -:: - - ## Feature Description - A clear description of the desired feature. - - ## Use Case - Why is this feature needed? - - ## Proposed Solution - How should this feature work? - - ## Alternatives - Other approaches considered. - - ## Additional Context - Any other relevant information. - -Development Guidelines +Contribution Checklist ---------------------- -Adding New Features -^^^^^^^^^^^^^^^^^^^ - -1. **Design the API** first -2. **Write tests** before implementation -3. **Keep backward compatibility** -4. **Update documentation** -5. **Add examples** if applicable +Before opening a pull request: -Modifying Existing Code -^^^^^^^^^^^^^^^^^^^^^^^ +* Keep changes focused and well-scoped +* Add or update tests when behavior changes +* Update documentation for user-facing changes +* Run ``pytest`` and ``flake8`` locally when possible -1. **Understand the current implementation** -2. **Check for breaking changes** -3. **Update related tests** -4. **Update documentation** -5. **Consider performance implications** - -Performance Considerations -^^^^^^^^^^^^^^^^^^^^^^^^^^ - -* **Profile code** for bottlenecks -* **Use appropriate data structures** -* **Consider memory usage** -* **Optimize API calls** -* **Cache results** when appropriate - -Security +PR Notes -------- -* **Never commit credentials** to the repository -* **Use secure coding practices** -* **Validate user input** -* **Handle errors gracefully** -* **Report security issues** privately - -Release Process ---------------- - -For maintainers: - -1. **Update version** in ``pyproject.toml`` and ``__init__.py`` -2. **Update changelog** -3. **Create release tag** -4. **Build and upload** to PyPI -5. **Create GitHub release** - -Version Numbering -^^^^^^^^^^^^^^^^^ - -Follow semantic versioning: - -* **MAJOR**: Breaking changes -* **MINOR**: New features (backward compatible) -* **PATCH**: Bug fixes - -Community ---------- - -* **Be respectful** and inclusive -* **Help others** in discussions -* **Share knowledge** and experiences -* **Follow the code of conduct** - -Resources ---------- - -* `Project Repository `_ -* `Issue Tracker `_ -* `Discussions `_ -* `PhiLab Website `_ +Include a concise description of: -Thank you for contributing to Φ-Down! 🚀 +* What changed +* Why it changed +* How you verified it diff --git a/docs/source/examples.rst b/docs/source/examples.rst index c94d7cf..8523744 100644 --- a/docs/source/examples.rst +++ b/docs/source/examples.rst @@ -1,499 +1,182 @@ Examples ======== -This section provides practical examples of using Φ-Down for common Earth Observation tasks. +This page collects short, current examples that match the package's public API. -Example 1: Basic Sentinel-2 Search ----------------------------------- - -Search for Sentinel-2 data over a specific area: +Example 1: Sentinel-2 Search +---------------------------- .. code-block:: python from phidown import CopernicusDataSearcher - # Initialize searcher searcher = CopernicusDataSearcher() - - # Define area of interest (Rome, Italy) - rome_wkt = 'POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))' - - # Search for data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt=rome_wkt, - start_date='2023-06-01', - end_date='2023-06-30', - cloud_cover_threshold=20 + searcher.query_by_filter( + collection_name="SENTINEL-2", + product_type="S2MSI2A", + aoi_wkt="POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))", + start_date="2024-05-01T00:00:00", + end_date="2024-05-31T23:59:59", + cloud_cover_threshold=20, + top=20, ) - - # Display results - print(f"Found {len(results)} products") - searcher.display_results(results, columns=['Name', 'ContentDate', 'CloudCover']) + results = searcher.execute_query() -Example 2: Sentinel-1 SAR Data Search -------------------------------------- + print(f"Found {len(results)} products") + print(searcher.display_results(top_n=5)) -Search for Sentinel-1 SAR data with specific parameters: +Example 2: Query by Product Name +-------------------------------- .. code-block:: python from phidown import CopernicusDataSearcher searcher = CopernicusDataSearcher() - - # Define area of interest (Netherlands) - netherlands_wkt = 'POLYGON((3.4 50.8, 7.2 50.8, 7.2 53.6, 3.4 53.6, 3.4 50.8))' - - # Search for Sentinel-1 GRD products - results = searcher.search( - collection_name='SENTINEL-1', - product_type='GRD', - aoi_wkt=netherlands_wkt, - start_date='2023-05-01', - end_date='2023-05-31', - orbit_direction='DESCENDING', - attributes={'sensorMode': 'IW'} + result = searcher.query_by_name( + "S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003" ) - - print(f"Found {len(results)} SAR products") - for idx, row in results.iterrows(): - print(f"Product: {row['Name']}") - print(f"Date: {row['ContentDate']}") - print(f"Orbit: {row['OrbitDirection']}") - print("---") - -For detailed Sentinel-1 parameters, see the :doc:`sentinel1_reference` guide. -Example 2b: Sentinel-1 SLC Burst Mode Search ---------------------------------------------- + print(result[["Name", "S3Path", "ContentLength"]].head(1)) -Search for individual Sentinel-1 SLC bursts (available from August 2, 2024): +Example 3: Batch Download +------------------------- .. code-block:: python from phidown import CopernicusDataSearcher searcher = CopernicusDataSearcher() - - # Search for bursts with temporal filter - results = searcher.query_by_filter( - burst_mode=True, - start_date='2024-08-01T00:00:00', - end_date='2024-08-03T00:00:00', - swath_identifier='IW2', - polarisation_channels='VV', - orbit_direction='DESCENDING', - top=10, - count=True + searcher.query_by_filter( + collection_name="SENTINEL-1", + product_type="GRD", + aoi_wkt="POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))", + start_date="2024-01-01T00:00:00", + end_date="2024-01-07T23:59:59", + top=5, ) - - df = searcher.execute_query() - print(f"Found {len(df)} bursts") - print(f"Total available: {searcher.num_results}") - - # Display burst-specific information - searcher.display_results(top_n=5) - -For detailed burst mode documentation, see the :doc:`sentinel1_burst_mode` guide. - -Example 3: Sentinel-3 Ocean Color Search ------------------------------------------ + results = searcher.execute_query() + + summary = searcher.download_products( + df=results, + output_dir="./downloads", + config_file=".s5cfg", + retry_count=3, + mode="safe", + ) + print(summary) -Search for Sentinel-3 OLCI ocean color data: +Example 4: CLI Listing +---------------------- -.. code-block:: python +.. code-block:: bash - from phidown import CopernicusDataSearcher + phidown list \ + --collection SENTINEL-2 \ + --product-type S2MSI2A \ + --bbox 10 45 12 46 \ + --start-date 2024-05-01T00:00:00 \ + --end-date 2024-05-31T23:59:59 \ + --columns Name,S3Path,ContentDate \ + --format table - searcher = CopernicusDataSearcher() - - # Define area of interest (Mediterranean Sea) - mediterranean_wkt = 'POLYGON((0 35, 10 35, 10 45, 0 45, 0 35))' - - # Search for OLCI ocean color products - results = searcher.search( - collection_name='SENTINEL-3', - product_type='OL_2_WFR___', - aoi_wkt=mediterranean_wkt, - start_date='2023-06-01', - end_date='2023-06-30', - attributes={ - 'instrument': 'OLCI', - 'cloudCover': '[0,20]' - } - ) - - print(f"Found {len(results)} ocean color products") - for idx, row in results.iterrows(): - print(f"Product: {row['Name']}") - print(f"Date: {row['ContentDate']}") - print(f"Instrument: {row.get('Instrument', 'N/A')}") - print("---") +Example 5: Burst Coverage Analysis +---------------------------------- -For detailed Sentinel-3 parameters, see the :doc:`sentinel3_reference` guide. +.. code-block:: bash -Example 4: Multi-Mission Search -------------------------------- + phidown --burst-coverage \ + --bbox 10 45 12 46 \ + --start-date 2024-08-02T00:00:00 \ + --end-date 2024-08-20T23:59:59 \ + --polarisation VV \ + --preferred-subswath IW1,IW2,IW3 \ + --format json -Search across multiple missions for comprehensive coverage: +Example 6: Interactive Polygon Search +------------------------------------- .. code-block:: python - from phidown import CopernicusDataSearcher - import pandas as pd + from phidown import create_polygon_tool, search_with_polygon - searcher = CopernicusDataSearcher() - - # Define area of interest (Mediterranean Sea) - mediterranean_wkt = 'POLYGON((0 30, 30 30, 30 45, 0 45, 0 30))' - - # Search multiple missions - missions = ['SENTINEL-1', 'SENTINEL-2', 'SENTINEL-3'] - all_results = [] - - for mission in missions: - print(f"Searching {mission}...") - results = searcher.search( - collection_name=mission, - aoi_wkt=mediterranean_wkt, - start_date='2023-07-01', - end_date='2023-07-07' - ) - results['Mission'] = mission - all_results.append(results) - - # Combine results - combined_results = pd.concat(all_results, ignore_index=True) - print(f"Total products found: {len(combined_results)}") - - # Group by mission - mission_counts = combined_results.groupby('Mission').size() - print("Products per mission:") - for mission, count in mission_counts.items(): - print(f" {mission}: {count}") - -Example 5: Download with Progress Tracking ------------------------------------------- + tool = create_polygon_tool(center=(45.0, 9.0), zoom=8, basemap_type="satellite") + tool.display() + + # After drawing a polygon in the notebook UI: + results = search_with_polygon( + tool, + collection_name="SENTINEL-2", + product_type="S2MSI1C", + start_date="2024-06-01T00:00:00", + end_date="2024-06-30T23:59:59", + ) -Download products with progress monitoring: +Example 7: Plot Product Footprints +---------------------------------- .. code-block:: python - from phidown import CopernicusDataSearcher - from phidown.downloader import pull_down - import os - from tqdm import tqdm + from phidown import CopernicusDataSearcher, plot_product_footprints + + aoi_wkt = "POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))" - # Search for products searcher = CopernicusDataSearcher() - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-06-01', - end_date='2023-06-30', - cloud_cover_threshold=10 + searcher.query_by_filter( + collection_name="SENTINEL-1", + product_type="SLC", + aoi_wkt=aoi_wkt, + start_date="2024-08-01T00:00:00", + end_date="2024-08-05T23:59:59", + top=20, ) - - # Create download directory - download_dir = './sentinel2_data' - os.makedirs(download_dir, exist_ok=True) - - # Download products with progress bar - for idx, row in tqdm(results.iterrows(), total=len(results), desc="Downloading"): - product_id = row['Id'] - product_name = row['Name'] - - print(f"Downloading: {product_name}") - try: - pull_down(product_id, download_dir=download_dir) - print(f"✓ Downloaded: {product_name}") - except Exception as e: - print(f"✗ Failed: {product_name} - {e}") - -Example 6: Interactive Polygon Selection ----------------------------------------- - -Use interactive tools to select area of interest: + results = searcher.execute_query() -.. code-block:: python + footprint_map = plot_product_footprints(results, aoi_wkt=aoi_wkt, top_n=10) + footprint_map.save("footprints.html") - from phidown import create_polygon_tool, search_with_polygon - - # Create interactive polygon tool - tool = create_polygon_tool( - center=[45.0, 9.0], # Milan, Italy - zoom=8 - ) - - # Display the tool (in Jupyter notebook) - tool.display() - - # After drawing polygon, get WKT - # wkt = tool.get_wkt() - # print(f"Selected area: {wkt}") - - # Or use the integrated search function - # results = search_with_polygon( - # collection_name='SENTINEL-2', - # start_date='2023-06-01', - # end_date='2023-06-30' - # ) - -Example 7: Time Series Analysis ------------------------------------ - -Analyze temporal patterns in search results: +Example 8: AIS Filtering +------------------------ .. code-block:: python - from phidown import CopernicusDataSearcher - import pandas as pd - import matplotlib.pyplot as plt + from phidown import download_ais_data - searcher = CopernicusDataSearcher() - - # Search for one year of data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-01-01', - end_date='2023-12-31', - cloud_cover_threshold=30 + df = download_ais_data( + start_date="2025-08-25", + end_date="2025-08-26", + start_time="09:00:00", + end_time="15:00:00", + aoi_wkt="POLYGON((4.0 51.0,5.0 51.0,5.0 52.0,4.0 52.0,4.0 51.0))", ) - - # Convert ContentDate to datetime - results['Date'] = pd.to_datetime(results['ContentDate']) - - # Group by month - monthly_counts = results.groupby(results['Date'].dt.to_period('M')).size() - monthly_cloud_cover = results.groupby(results['Date'].dt.to_period('M'))['CloudCover'].mean() - - # Plot results - fig, (ax1, ax2) = plt.subplots(2, 1, figsize=(12, 8)) - - # Product count per month - monthly_counts.plot(kind='bar', ax=ax1) - ax1.set_title('Sentinel-2 Products per Month') - ax1.set_ylabel('Number of Products') - - # Average cloud cover per month - monthly_cloud_cover.plot(kind='line', ax=ax2, marker='o') - ax2.set_title('Average Cloud Cover per Month') - ax2.set_ylabel('Cloud Cover (%)') - - plt.tight_layout() - plt.show() - -Example 8: Batch Processing with Error Handling ------------------------------------------------ - -Process multiple areas with robust error handling: -.. code-block:: python + print(df.head()) - from phidown import CopernicusDataSearcher - from phidown.downloader import pull_down - import time - import logging - - # Set up logging - logging.basicConfig(level=logging.INFO) - logger = logging.getLogger(__name__) - - # Define multiple areas of interest - areas = { - 'Rome': 'POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - 'Milan': 'POLYGON((9.1 45.4, 9.2 45.4, 9.2 45.5, 9.1 45.5, 9.1 45.4))', - 'Naples': 'POLYGON((14.2 40.8, 14.3 40.8, 14.3 40.9, 14.2 40.9, 14.2 40.8))' - } - - searcher = CopernicusDataSearcher() - - for area_name, wkt in areas.items(): - logger.info(f"Processing {area_name}...") - - try: - # Search for data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt=wkt, - start_date='2023-06-01', - end_date='2023-06-30', - cloud_cover_threshold=15 - ) - - logger.info(f"Found {len(results)} products for {area_name}") - - # Download first product if available - if len(results) > 0: - best_product = results.loc[results['CloudCover'].idxmin()] - product_id = best_product['Id'] - - logger.info(f"Downloading best product: {best_product['Name']}") - pull_down(product_id, download_dir=f'./data/{area_name}') - logger.info(f"✓ Downloaded product for {area_name}") - else: - logger.warning(f"No products found for {area_name}") - - except Exception as e: - logger.error(f"Error processing {area_name}: {e}") - continue - - # Be respectful to the API - time.sleep(2) - -Example 9: Advanced Filtering and Analysis +Example 9: Manual Pagination With ``skip`` ------------------------------------------ -Apply complex filters and analyze results: - .. code-block:: python from phidown import CopernicusDataSearcher - import pandas as pd - import numpy as np - searcher = CopernicusDataSearcher() - - # Search for data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-01-01', - end_date='2023-12-31' + filters = dict( + collection_name="SENTINEL-2", + product_type="S2MSI2A", + start_date="2024-05-01T00:00:00", + end_date="2024-05-31T23:59:59", + top=10, ) - - # Advanced filtering - # Filter for high-quality images - high_quality = results[ - (results['CloudCover'] < 10) & - (results['ProductType'] == 'L2A') - ] - - # Group by season - results['Date'] = pd.to_datetime(results['ContentDate']) - results['Season'] = results['Date'].dt.month.map({ - 12: 'Winter', 1: 'Winter', 2: 'Winter', - 3: 'Spring', 4: 'Spring', 5: 'Spring', - 6: 'Summer', 7: 'Summer', 8: 'Summer', - 9: 'Autumn', 10: 'Autumn', 11: 'Autumn' - }) - - # Analyze by season - seasonal_analysis = results.groupby('Season').agg({ - 'CloudCover': ['mean', 'std', 'count'], - 'Size': 'mean' - }).round(2) - - print("Seasonal Analysis:") - print(seasonal_analysis) - - # Find the best acquisition per month - best_monthly = results.loc[results.groupby(results['Date'].dt.to_period('M'))['CloudCover'].idxmin()] - - print("\nBest acquisition per month:") - for idx, row in best_monthly.iterrows(): - print(f"{row['Date'].strftime('%Y-%m')}: {row['Name']} (Cloud Cover: {row['CloudCover']}%)") - -Example 10: Visualization and Mapping ------------------------------------- - -Create visualizations of search results: -.. code-block:: python + searcher = CopernicusDataSearcher() + searcher.query_by_filter(**filters, skip=0) + first_page = searcher.execute_query() - from phidown import CopernicusDataSearcher, plot_kml_coordinates - import folium - from shapely.geometry import Point - from shapely.wkt import loads + searcher.query_by_filter(**filters, skip=10) + second_page = searcher.execute_query() - searcher = CopernicusDataSearcher() - - # Search for data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-06-01', - end_date='2023-06-30', - cloud_cover_threshold=20 - ) - - # Use built-in plotting function - plot_kml_coordinates(results) - - # Create custom map - center_lat, center_lon = 41.95, 12.45 - m = folium.Map(location=[center_lat, center_lon], zoom_start=10) - - # Add search area - search_area = loads('POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))') - folium.GeoJson( - search_area.__geo_interface__, - style_function=lambda x: {'color': 'red', 'weight': 2, 'fillOpacity': 0.1} - ).add_to(m) - - # Add product footprints (if available in results) - for idx, row in results.iterrows(): - if 'Footprint' in row and row['Footprint']: - folium.GeoJson( - loads(row['Footprint']).__geo_interface__, - popup=f"Product: {row['Name']}
Date: {row['ContentDate']}
Cloud Cover: {row['CloudCover']}%", - style_function=lambda x: {'color': 'blue', 'weight': 1, 'fillOpacity': 0.3} - ).add_to(m) - - # Save map - m.save('search_results_map.html') - print("Map saved as 'search_results_map.html'") - -Example 11: Configuration and Customization -------------------------------------------- - -Customize search parameters and configuration: + print(len(first_page), len(second_page)) -.. code-block:: python +.. note:: - from phidown import CopernicusDataSearcher - import json - - # Load custom configuration - custom_config = { - "SENTINEL-2": { - "product_types": ["L1C", "L2A"], - "attributes": { - "processingLevel": "L2A", - "cloudCover": "[0 TO 20]" - } - } - } - - searcher = CopernicusDataSearcher() - searcher.config = custom_config - - # Search with custom attributes - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-06-01', - end_date='2023-06-30', - attributes={'processingLevel': 'L2A'} - ) - - # Save configuration - with open('custom_config.json', 'w') as f: - json.dump(custom_config, f, indent=2) - - print(f"Found {len(results)} products with custom configuration") - -Tips for Using Examples ------------------------ - -1. **Modify coordinates**: Replace the example coordinates with your area of interest -2. **Adjust date ranges**: Use appropriate date ranges for your analysis -3. **Handle credentials**: Ensure your `.s5cfg` file is properly configured with S3 credentials -4. **Monitor API limits**: Be respectful of API rate limits when processing large datasets -5. **Error handling**: Always include proper error handling in production code -6. **Data storage**: Organize downloaded data in a structured manner -7. **Sentinel-1 parameters**: For detailed Sentinel-1 search parameters, see the :doc:`sentinel1_reference` guide - -For more examples and use cases, check the `notebooks/` directory in the repository. + ``count=True`` still retrieves every page eagerly and cannot be combined + with ``skip``. diff --git a/docs/source/getting_started.rst b/docs/source/getting_started.rst index 829cd52..70a5e85 100644 --- a/docs/source/getting_started.rst +++ b/docs/source/getting_started.rst @@ -1,119 +1,170 @@ Getting Started =============== -Welcome to Φ-Down! This guide will help you get up and running with downloading Copernicus satellite data. - -What is Φ-Down? ---------------- - -Φ-Down is a Python library that provides a simple interface to search and download Earth Observation data from the Copernicus Data Space Ecosystem. It supports all major Sentinel missions and provides both programmatic access and interactive tools. +Phi-Down provides a Python API and CLI for searching Copernicus Data Space +products and downloading them through S3. Prerequisites ------------- -Before using Φ-Down, you'll need: +Before you begin, make sure you have: -1. **Python 3.9+** - Φ-Down requires Python 3.9 or later -2. **Copernicus Data Space Account** - Register at ``_ -3. **S3 Credentials** (required) - Get S3 credentials from the `S3 Key Manager `_ +1. Python 3.9 or newer +2. A Copernicus Data Space account: ``_ +3. S3 credentials from the `S3 Key Manager `_ +4. ``s5cmd`` installed if you plan to download products -First Steps ------------ +Install Phi-Down +---------------- -1. **Install Φ-Down**: +.. code-block:: bash - .. code-block:: bash + pip install phidown - pip install phidown +Configure S3 Credentials +------------------------ -2. **Set up your S3 credentials**: +Phi-Down reads CDSE S3 credentials from an ``.s5cfg`` file. By default it +looks for ``.s5cfg`` in your current working directory, but you can also pass a +custom path with the CLI ``-c/--config-file`` option or the Python +``config_file=...`` argument. - Create a `.s5cfg` file in your working directory: +Create a minimal ``.s5cfg`` file: - .. code-block:: yaml +.. code-block:: ini - [default] - aws_access_key_id = your_access_key - aws_secret_access_key = access_key_secret - aws_region = eu-central-1 - host_base = eodata.dataspace.copernicus.eu - host_bucket = eodata.dataspace.copernicus.eu - use_https = true - check_ssl_certificate = true + [default] + aws_access_key_id = your_access_key + aws_secret_access_key = your_secret_key + aws_region = eu-central-1 + host_base = eodata.dataspace.copernicus.eu + host_bucket = eodata.dataspace.copernicus.eu + use_https = true + check_ssl_certificate = true - Replace `your_access_key` and `access_key_secret` with your actual S3 credentials. +Guidelines: -3. **Your first search**: +* Keep the section name as ``[default]``. Phi-Down currently reads credentials + from that section. +* ``aws_access_key_id`` and ``aws_secret_access_key`` are the critical values. + The rest should normally stay as shown above for CDSE. +* ``host_base`` and ``host_bucket`` should both remain + ``eodata.dataspace.copernicus.eu``. +* ``aws_region`` should remain ``eu-central-1`` unless CDSE changes its S3 + endpoint requirements. +* Values may be quoted or unquoted; Phi-Down strips wrapping quotes when + loading the file. +* Phi-Down reads this file and forwards the values to ``s5cmd`` at runtime. + Treat it as the Phi-Down download credential file, not as a generic + replacement for every standalone ``s5cmd`` workflow. +* Do not commit ``.s5cfg`` to version control. On shared systems, restrict file + permissions if possible, for example with ``chmod 600 .s5cfg``. - .. code-block:: python +If you prefer to store the file outside the project directory, for example at +``~/.config/phidown/cdse.s5cfg``, point Phi-Down at it explicitly: - from phidown import CopernicusDataSearcher +.. code-block:: bash - # Initialize the searcher - searcher = CopernicusDataSearcher() - - # Search for Sentinel-2 data over Rome - searcher.query_by_filter( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-01-01', - end_date='2023-01-31' - ) - - df = searcher.execute_query() + phidown --name PRODUCT_NAME -o ./data -c ~/.config/phidown/cdse.s5cfg - # Display results - print(f"Number of results: {len(df)}") - # Display the first few rows of the DataFrame - print(searcher.display_results(top_n=15)) +.. code-block:: python -4. **Download data**: + from pathlib import Path + from phidown import CopernicusDataSearcher - Download a product using its name from the search results: + searcher = CopernicusDataSearcher() - .. code-block:: python - """ - Args: - product_name (str): Name of the product to download (from search results) - config_file (str): Path to the configuration file containing authentication credentials - output_dir (str): Directory where the downloaded product will be saved + searcher.download_product( + eo_product_name="PRODUCT_NAME", + output_dir="./data", + config_file=str(Path.home() / ".config/phidown/cdse.s5cfg"), + ) - Note: - - Update the config_file path to point to your actual .s5cfg file - - Update the output_dir path to your desired download location - - The example downloads the first product from the search results (df.iloc[0]) - """ - searcher.download_product('EO_PRODUCT_NAME', - config_file='path/to/your/config/file/.s5cfg', - output_dir='path/to/your/download/directory/') +First Search +------------ +The standard search flow is: +1. Create ``CopernicusDataSearcher`` +2. Configure filters with ``query_by_filter()`` +3. Execute the request with ``execute_query()`` -What's Next? ------------- +.. code-block:: python -* Read the :doc:`user_guide` for detailed usage instructions -* Check out the :doc:`examples` for common use cases -* Explore the :doc:`api_reference` for complete API documentation -* Review mission-specific guides: - - :doc:`sentinel1_reference` for SAR data parameters - - :doc:`sentinel2_reference` for optical data parameters - - :doc:`sentinel3_reference` for ocean/land data parameters - - :doc:`ccm_reference` for Copernicus Contributing Missions access -* Try the interactive tools for polygon selection and visualization + from phidown import CopernicusDataSearcher -Common Issues -------------- + searcher = CopernicusDataSearcher() + searcher.query_by_filter( + collection_name="SENTINEL-2", + product_type="S2MSI2A", + aoi_wkt="POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))", + start_date="2024-05-01T00:00:00", + end_date="2024-05-31T23:59:59", + top=20, + ) + results = searcher.execute_query() + + print(f"Found {len(results)} products") + print(searcher.display_results(top_n=5)) + +First Download +-------------- + +Download a product by name from Python: + +.. code-block:: python + + from phidown import CopernicusDataSearcher -**Authentication errors**: Make sure your credentials are correct and your account is active. + searcher = CopernicusDataSearcher() + searcher.download_product( + eo_product_name="S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003", + output_dir="./data", + config_file=".s5cfg", + mode="fast", # default: fast (s5cmd), or safe (resumable) + ) -**Network timeouts**: Large files may take time to download. Consider using S3 credentials for faster access. +For unstable connections, use safe mode with automatic retries: + +.. code-block:: python + + searcher.download_product( + eo_product_name="S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003", + output_dir="./data", + mode="safe", + retry_count=5, + ) + +Or use the CLI directly: + +.. code-block:: bash + + # Fast mode (default) + phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data + + # Safe mode with retries + phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data --mode safe --retry-count 5 + +Useful Next Steps +----------------- + +* Read :doc:`user_guide` for the main workflows +* Read :doc:`cli` for terminal usage +* Read :doc:`examples` for end-to-end snippets +* Read :doc:`sentinel1_burst_mode` and :doc:`burst_mode` for burst workflows + +Common Issues +------------- -**Import errors**: Ensure all dependencies are installed. Some features require optional dependencies like ``ipyleaflet``. +Authentication errors + Regenerate your S3 credentials, update ``.s5cfg``, and make sure you are + using the intended file path if you keep credentials outside the working + directory. -Need Help? ----------- +Empty search results + Tight filters, unavailable dates, or invalid AOI geometries are the most + common causes. -* Check the `GitHub Issues `_ page -* Join the `PhiLab LinkedIn Group `_ -* Contact the author on `LinkedIn `_ +Download failures + Confirm that ``s5cmd`` is installed and the product path begins with + ``/eodata/`` when using direct S3 downloads. diff --git a/docs/source/index.rst b/docs/source/index.rst index 70ea3d0..41dbd6e 100644 --- a/docs/source/index.rst +++ b/docs/source/index.rst @@ -19,9 +19,9 @@ Welcome to Φ-Down Documentation cli user_guide ais_guide - s1_slc_burst_downloader api_reference examples + burst_mode sentinel1_reference sentinel1_burst_mode sentinel2_reference @@ -70,12 +70,13 @@ Search for data: from phidown import CopernicusDataSearcher searcher = CopernicusDataSearcher() - results = searcher.search( + searcher.query_by_filter( collection_name='SENTINEL-2', aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', start_date='2023-01-01', end_date='2023-01-31' ) + results = searcher.execute_query() Indices and tables ================== @@ -83,4 +84,3 @@ Indices and tables * :ref:`genindex` * :ref:`modindex` * :ref:`search` - diff --git a/docs/source/installation.rst b/docs/source/installation.rst index ad57a60..62a347d 100644 --- a/docs/source/installation.rst +++ b/docs/source/installation.rst @@ -4,122 +4,53 @@ Installation Requirements ------------ -Φ-Down requires Python 3.9 or later. It has been tested on: +Phi-Down requires: -* Python 3.9, 3.10, 3.11, 3.12 -* macOS, Linux, Windows +* Python 3.9 or newer +* ``s5cmd`` on your ``PATH`` for S3 downloads +* Copernicus Data Space credentials for authenticated downloads -Dependencies ------------- - -Core dependencies (automatically installed): - -* ``s5cmd`` - High-performance S3 client for data downloads -* ``pandas`` - Data manipulation and analysis -* ``ipyleaflet`` - Interactive maps for Jupyter notebooks -* ``huggingface-hub`` - Access to Hugging Face model hub - -Optional dependency groups: - -**ais** - AIS (vessel tracking) support: - -* ``shapely`` - Geometric operations for spatial data +Install from PyPI +----------------- -**viz** - Visualization tools: - -* ``ipywidgets`` - Interactive widgets for Jupyter -* ``folium`` - Web-based interactive maps - -**dev** - Development tools: - -* ``pytest`` - Testing framework -* ``pytest-mock`` - Mocking library for tests -* ``flake8`` - Code style checker - -**docs** - Documentation tools: - -* ``sphinx`` - Documentation generator -* ``sphinx-rtd-theme`` - Read the Docs theme for Sphinx -* ``sphinx-autodoc-typehints`` - Type hints support in documentation -* ``myst-parser`` - Markdown parser for Sphinx -* ``sphinx-copybutton`` - Copy button for code blocks -* ``sphinx-autoapi`` - Automatic API documentation generation - -Installing from PyPI --------------------- - -The easiest way to install Φ-Down is using pip: +Install the base package: .. code-block:: bash pip install phidown -This will install the core package with all required dependencies. - -Installing with Optional Features ----------------------------------- - -Φ-Down comes with several optional dependency groups that enable additional functionality: - -**Visualization Tools** - -To use interactive features like polygon selection tools and maps: +Install optional feature groups as needed: .. code-block:: bash - pip install phidown[viz] + # Interactive plotting and footprint maps + pip install "phidown[viz]" -This installs visualization dependencies (``ipywidgets``, ``folium``). + # AIS download and filtering support + pip install "phidown[ais]" -**AIS (Automatic Identification System) Support** + # Notebook-oriented dependencies + pip install "phidown[jupyter_env]" -For vessel tracking and maritime monitoring features: + # Development, tests, and documentation + pip install "phidown[dev,test,docs]" -.. code-block:: bash +Optional Dependency Groups +-------------------------- - pip install phidown[ais] +Phi-Down exposes these optional dependency groups in ``pyproject.toml``: -This installs geometry processing dependencies (``shapely``). +* ``viz``: Folium, raster/plotting, and map visualization helpers +* ``ais``: AIS download support, including spatial filtering dependencies +* ``jupyter_env``: Jupyter widgets and notebook integrations +* ``dev``: Development tools such as ``pytest`` and ``flake8`` +* ``test``: Test-only dependencies used by the local suite +* ``docs``: Sphinx and related documentation tooling -**Development Tools** +Install from Source +------------------- -For contributing to the project or running tests: - -.. code-block:: bash - - pip install phidown[dev] - -This installs testing and code quality tools (``pytest``, ``pytest-mock``, ``flake8``). - -**Documentation Tools** - -For building and contributing to documentation: - -.. code-block:: bash - - pip install phidown[docs] - -This installs documentation dependencies (``sphinx``, ``sphinx-rtd-theme``, etc.). - -**All Optional Features** - -To install everything at once: - -.. code-block:: bash - - pip install phidown[ais,viz,dev,docs] - -.. note:: - For most users, we recommend installing with visualization support for the best experience: - - .. code-block:: bash - - pip install phidown[viz] - -Installing from Source ----------------------- - -To install the latest development version: +Using ``pip``: .. code-block:: bash @@ -127,23 +58,16 @@ To install the latest development version: cd phidown pip install -e . -For development with specific optional dependencies: +With optional extras: .. code-block:: bash - git clone https://github.com/ESA-PhiLab/phidown.git - cd phidown - - # Install with visualization support - pip install -e .[viz] - - # Install with all optional features - pip install -e .[ais,viz,dev,docs] + pip install -e ".[viz,ais,dev,test,docs]" -Using PDM (Recommended for Development) ------------------------------------------ +Using PDM +--------- -If you're contributing to Φ-Down, use PDM for dependency management: +For local development, PDM matches the repository setup: .. code-block:: bash @@ -151,125 +75,113 @@ If you're contributing to Φ-Down, use PDM for dependency management: cd phidown pdm install -This installs all core dependencies. For optional dependency groups: +To include optional groups: .. code-block:: bash - # Install with visualization support - pdm install --group viz + pdm install -G viz -G ais -G dev -G test -G docs -G jupyter_env - # Install with AIS support - pdm install --group ais +Install ``s5cmd`` +----------------- - # Install with development tools - pdm install --group dev - - # Install with documentation tools - pdm install --group docs - - # Install all optional groups - pdm install --group viz --group ais --group dev --group docs - -Conda Installation ------------------- - -Currently, Φ-Down is not available on conda-forge, but you can install it in a conda environment: +Phi-Down uses ``s5cmd`` for S3 transfers. Install it separately if you plan to +download data: .. code-block:: bash - conda create -n phidown python=3.12 - conda activate phidown - pip install phidown - -Verification ------------- - -To verify your installation: - -.. code-block:: python - - import phidown - print(phidown.__version__) + brew install peak/tap/s5cmd - # Test basic functionality - from phidown import CopernicusDataSearcher - searcher = CopernicusDataSearcher() - print("✓ Installation successful!") - -Docker Installation --------------------- - -A Docker image is available for containerized usage: +or .. code-block:: bash - docker pull ghcr.io/esa-philab/phidown:latest + go install github.com/peak/s5cmd/v2@latest -Or build from source: +Then verify: .. code-block:: bash - git clone https://github.com/ESA-PhiLab/phidown.git - cd phidown - docker build -t phidown . + s5cmd version -Troubleshooting ---------------- - -**ImportError for optional dependencies**: +Configure ``.s5cfg`` +-------------------- -If you see errors about missing ``ipyleaflet`` or ``ipywidgets``, install visualization dependencies: +Phi-Down uses an ``.s5cfg`` file to source CDSE S3 credentials for download +operations. -.. code-block:: bash +Recommended template: - pip install phidown[viz] +.. code-block:: ini -**SSL Certificate errors**: + [default] + aws_access_key_id = your_access_key + aws_secret_access_key = your_secret_key + aws_region = eu-central-1 + host_base = eodata.dataspace.copernicus.eu + host_bucket = eodata.dataspace.copernicus.eu + use_https = true + check_ssl_certificate = true -On some systems, you may encounter SSL issues. Try: - -.. code-block:: bash +Guidelines: - pip install --trusted-host pypi.org --trusted-host pypi.python.org phidown +* Keep the section name as ``[default]``. +* Store the file in the working directory as ``.s5cfg`` if you want to rely on + Phi-Down defaults. +* If you keep credentials elsewhere, pass the path explicitly with + ``-c/--config-file`` in the CLI or ``config_file=...`` in Python. +* Keep ``host_base`` and ``host_bucket`` aligned with the CDSE endpoint shown + above. +* Phi-Down parses this file itself and then sets the relevant environment + variables for ``s5cmd``. +* Avoid committing the file to git. Add ``.s5cfg`` to your local ignore rules + if needed. +* Rotate credentials in the CDSE S3 key manager if a file is exposed or copied + to an untrusted environment. -**Permission errors on Windows**: - -Run your command prompt as administrator or use: +Example custom path usage: .. code-block:: bash - pip install --user phidown - -**Dependency conflicts**: - -If you have conflicts with existing packages, consider using a virtual environment: + phidown --name PRODUCT_NAME -o ./data -c ~/.config/phidown/cdse.s5cfg -.. code-block:: bash +.. code-block:: python - python -m venv phidown_env - source phidown_env/bin/activate # On Windows: phidown_env\Scripts\activate - pip install phidown + from pathlib import Path + from phidown import CopernicusDataSearcher -Upgrading ---------- + searcher = CopernicusDataSearcher() + searcher.download_product( + eo_product_name="PRODUCT_NAME", + output_dir="./data", + config_file=str(Path.home() / ".config/phidown/cdse.s5cfg"), + ) -To upgrade to the latest version: +Verification +------------ -.. code-block:: bash +Check that the package imports and reports the expected version: - pip install --upgrade phidown +.. code-block:: python -To upgrade with visualization dependencies: + import phidown + print(phidown.__version__) -.. code-block:: bash + from phidown import CopernicusDataSearcher + searcher = CopernicusDataSearcher() + print(type(searcher).__name__) - pip install --upgrade phidown[viz] +Troubleshooting +--------------- -Uninstalling ------------- +``s5cmd: command not found`` + Install ``s5cmd`` and make sure it is available on your ``PATH``. -To remove Φ-Down: +Missing optional dependencies + Install the relevant extra, such as ``phidown[viz]`` or ``phidown[ais]``. -.. code-block:: bash +Import errors in notebooks + Install ``phidown[jupyter_env]`` for widget and notebook integrations. - pip uninstall phidown +Authentication failures + Recreate your ``.s5cfg`` file with fresh Copernicus Data Space S3 + credentials before retrying downloads. diff --git a/docs/source/user_guide.rst b/docs/source/user_guide.rst index a256e0e..f83a9ba 100644 --- a/docs/source/user_guide.rst +++ b/docs/source/user_guide.rst @@ -1,440 +1,271 @@ User Guide ========== -This guide provides detailed instructions for using Φ-Down to search and download Copernicus satellite data. +This guide covers the main Phi-Down workflows: searching, downloading, +command-line usage, interactive polygon selection, plotting, and AIS data +access. -Setting Up S3 Credentials --------------------------- +Search Workflow +--------------- -Before using Φ-Down, you need to set up your S3 credentials for accessing the Copernicus Data Space Ecosystem. S3 credentials are required for downloading data. -🔗 Manage S3 Credentials: https://eodata-s3keysmanager.dataspace.copernicus.eu/panel/s3-credentials - -Configuration File Method -^^^^^^^^^^^^^^^^^^^^^^^^^^ - -Create a `.s5cfg` file in your working directory: - -.. code-block:: yaml - - [default] - aws_access_key_id = your_access_key - aws_secret_access_key = access_key_secret - aws_region = eu-central-1 - host_base = eodata.dataspace.copernicus.eu - host_bucket = eodata.dataspace.copernicus.eu - use_https = true - check_ssl_certificate = true - -Replace `your_access_key` and `access_key_secret` with your actual S3 credentials obtained from the `S3 Key Manager `_. - -Searching for Data ------------------- - -The ``CopernicusDataSearcher`` class provides flexible search capabilities. - -Basic Search -^^^^^^^^^^^^ +The core Python workflow uses ``CopernicusDataSearcher``: .. code-block:: python from phidown import CopernicusDataSearcher searcher = CopernicusDataSearcher() - - # Search for Sentinel-2 data - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-01-01', - end_date='2023-01-31' + searcher.query_by_filter( + collection_name="SENTINEL-1", + product_type="GRD", + aoi_wkt="POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))", + start_date="2024-01-01T00:00:00", + end_date="2024-01-31T23:59:59", + orbit_direction="DESCENDING", + top=25, ) + results = searcher.execute_query() -Search Parameters -^^^^^^^^^^^^^^^^^ - -Available search parameters: - -* ``collection_name``: Mission name (e.g., 'SENTINEL-1', 'SENTINEL-2') -* ``product_type``: Product type (e.g., 'L1C', 'L2A') -* ``aoi_wkt``: Area of interest in WKT format -* ``start_date``: Start date (YYYY-MM-DD) -* ``end_date``: End date (YYYY-MM-DD) -* ``cloud_cover_threshold``: Maximum cloud cover percentage -* ``orbit_direction``: 'ASCENDING' or 'DESCENDING' -* ``attributes``: Additional filtering attributes - -Advanced Search -^^^^^^^^^^^^^^^ - -.. code-block:: python + print(results.columns.tolist()) + print(searcher.display_results(top_n=5)) - # Search with multiple filters - results = searcher.search( - collection_name='SENTINEL-2', - product_type='L2A', - aoi_wkt='POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))', - start_date='2023-01-01', - end_date='2023-01-31', - cloud_cover_threshold=20, - attributes={'processingLevel': 'L2A'} - ) +Common Filters +-------------- -Supported Missions ------------------- +The most frequently used ``query_by_filter()`` parameters are: -Φ-Down supports all major Copernicus missions: +* ``collection_name``: Mission or collection such as ``SENTINEL-1`` or ``SENTINEL-2`` +* ``product_type``: Product identifier such as ``GRD``, ``SLC``, ``S2MSI1C``, or ``OL_2_WFR___`` +* ``aoi_wkt``: Area of interest as WKT in EPSG:4326. Supported types are ``POINT``, + ``MULTIPOINT``, ``LINESTRING``, ``MULTILINESTRING``, ``POLYGON``, and ``MULTIPOLYGON`` +* ``start_date`` and ``end_date``: ISO 8601 time filters +* ``orbit_direction``: ``ASCENDING`` or ``DESCENDING`` where applicable +* ``cloud_cover_threshold``: Cloud filtering for optical collections +* ``attributes``: Additional mission-specific attribute filters +* ``top`` and ``order_by``: Result count and ordering controls +* ``skip``: Manual page offset for frontend-style pagination +* ``count``: Eagerly retrieves all pages when the result count exceeds ``top`` -Sentinel-1 (SAR) -^^^^^^^^^^^^^^^^ +Manual Pagination With ``skip`` +------------------------------- -* **Collection**: 'SENTINEL-1' -* **Product Types**: 'GRD', 'SLC', 'OCN' -* **Use Cases**: Land monitoring, ocean surveillance, emergency response +Use ``skip`` when you want one page at a time instead of automatic full-result +pagination. .. code-block:: python - results = searcher.search( - collection_name='SENTINEL-1', - product_type='GRD', - orbit_direction='DESCENDING', - start_date='2023-01-01', - end_date='2023-01-31' - ) - -Sentinel-2 (Optical) -^^^^^^^^^^^^^^^^^^^^ - -* **Collection**: 'SENTINEL-2' -* **Product Types**: 'S2MSI1C', 'S2MSI2A' -* **Use Cases**: Land cover mapping, agriculture monitoring, environmental analysis - -.. code-block:: python + from phidown import CopernicusDataSearcher - results = searcher.search( - collection_name='SENTINEL-2', - product_type='S2MSI2A', - cloud_cover_threshold=10, - start_date='2023-01-01', - end_date='2023-01-31' + filters = dict( + collection_name="SENTINEL-1", + product_type="GRD", + start_date="2024-01-01T00:00:00", + end_date="2024-01-31T23:59:59", + top=20, ) -For detailed Sentinel-2 search parameters and examples, see the :doc:`sentinel2_reference` guide. - -Sentinel-3 (Ocean/Land) -^^^^^^^^^^^^^^^^^^^^^^^ + searcher = CopernicusDataSearcher() + searcher.query_by_filter(**filters, skip=0) + first_page = searcher.execute_query() -* **Collection**: 'SENTINEL-3' -* **Product Types**: 'OL_1_EFR___', 'OL_2_LFR___', 'SL_1_RBT___', 'SL_2_LST___' -* **Use Cases**: Ocean color, land surface temperature, topography + searcher.query_by_filter(**filters, skip=20) + second_page = searcher.execute_query() -.. code-block:: python +Use this pattern for "load more" buttons or infinite scroll UIs. ``count=True`` +still performs eager multi-page retrieval and cannot be combined with +``skip``. - results = searcher.search( - collection_name='SENTINEL-3', - product_type='OL_2_LFR___', - start_date='2023-01-01', - end_date='2023-01-31', - attributes={'instrument': 'OLCI'} - ) +Search by Product Name +---------------------- -For detailed Sentinel-3 search parameters and examples, see the :doc:`sentinel3_reference` guide. +If you already know the product identifier, use ``query_by_name()``: -Sentinel-5P (Atmospheric) -^^^^^^^^^^^^^^^^^^^^^^^^^ +.. code-block:: python -* **Collection**: 'SENTINEL-5P' -* **Product Types**: 'L1B_IR_SIR', 'L1B_IR_UVN', 'L1B_RA_BD1', 'L2__AER_AI' -* **Use Cases**: Air quality monitoring, greenhouse gas measurements + from phidown import CopernicusDataSearcher -Working with Results --------------------- + searcher = CopernicusDataSearcher() + result = searcher.query_by_name( + "S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003" + ) -Search results are returned as pandas DataFrames for easy manipulation. + print(result[["Name", "S3Path"]].head(1)) -Displaying Results -^^^^^^^^^^^^^^^^^^ +``.s5cfg`` Configuration +------------------------ -.. code-block:: python +Download workflows use an ``.s5cfg`` credentials file. Phi-Down expects the +credentials in the ``[default]`` section and uses that file to populate the +environment for ``s5cmd``. - # Display all results - print(results) - - # Display specific columns - searcher.display_results(results, columns=['Name', 'ContentDate', 'CloudCover']) - - # Get result summary - print(f"Found {len(results)} products") - print(f"Date range: {results['ContentDate'].min()} to {results['ContentDate'].max()}") +Example: -Filtering Results -^^^^^^^^^^^^^^^^^ +.. code-block:: ini -.. code-block:: python + [default] + aws_access_key_id = your_access_key + aws_secret_access_key = your_secret_key + aws_region = eu-central-1 + host_base = eodata.dataspace.copernicus.eu + host_bucket = eodata.dataspace.copernicus.eu + use_https = true + check_ssl_certificate = true - # Filter by cloud cover - clear_results = results[results['CloudCover'] < 10] - - # Filter by date - recent_results = results[results['ContentDate'] > '2023-01-15'] - - # Sort by date - sorted_results = results.sort_values('ContentDate') +Practical rules: -Downloading Data ----------------- +* Default lookup is ``./.s5cfg`` unless you pass another file path. +* Use ``-c/--config-file`` in the CLI or ``config_file=...`` in Python when + the file lives elsewhere. +* Keep the endpoint values exactly aligned with the CDSE S3 service unless you + know you need a different endpoint. +* Treat the file as a secret and avoid checking it into git. +* If you use ``--reset`` in the CLI, Phi-Down can recreate the file + interactively for download commands. -Use the ``pull_down`` function to download products: +Downloads +--------- -Basic Download -^^^^^^^^^^^^^^ +Download a single product by name: .. code-block:: python - from phidown.s5cmd_utils import download as pull_down - - # Download a single product using S3 path - s3_path = '/eodata/Sentinel-1/SAR/IW_RAW__0S/2024/05/03/S1A_IW_RAW__0SDV_20240503T031926_20240503T031942_053701_0685FB_E003.SAFE' - pull_down( - s3_path=s3_path, - output_dir='./data', - config_file='.s5cfg', - endpoint_url='https://eodata.dataspace.copernicus.eu', - download_all=True, - reset=False + from phidown import CopernicusDataSearcher + + searcher = CopernicusDataSearcher() + searcher.download_product( + eo_product_name="S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003", + output_dir="./data", + config_file=".s5cfg", ) -Batch Download -^^^^^^^^^^^^^^ +Download multiple products from a DataFrame: .. code-block:: python - # Download multiple products - for idx, row in results.iterrows(): - s3_path = row['S3Path'] # Assuming S3Path is available in results - print(f"Downloading {row['Name']}") - pull_down( - s3_path=s3_path, - output_dir='./data', - config_file='.s5cfg' - ) - -Download with S3 Configuration -^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ - -The download function uses S3 credentials by default. Make sure your `.s5cfg` file is properly configured: - -.. code-block:: python + from phidown import CopernicusDataSearcher - # The .s5cfg file should contain: - # [default] - # aws_access_key_id = your_access_key - # aws_secret_access_key = access_key_secret - # aws_region = eu-central-1 - # host_base = eodata.dataspace.copernicus.eu - # host_bucket = eodata.dataspace.copernicus.eu - # use_https = true - # check_ssl_certificate = true - - # Reset configuration and prompt for new credentials - pull_down( - s3_path=s3_path, - output_dir='./data', - reset=True + searcher = CopernicusDataSearcher() + searcher.query_by_filter( + collection_name="SENTINEL-2", + product_type="S2MSI2A", + start_date="2024-05-01T00:00:00", + end_date="2024-05-05T23:59:59", + aoi_wkt="POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))", + top=10, + ) + results = searcher.execute_query() + + summary = searcher.download_products( + df=results.head(3), + output_dir="./data", + config_file=".s5cfg", + mode="safe", + retry_count=3, ) + print(summary) Command Line Usage ------------------ -Φ-Down also provides a command-line interface for downloading, listing products, and burst coverage analysis: +The CLI supports downloads, product listing, and burst coverage analysis. .. code-block:: bash # Download by product name phidown --name S1A_IW_GRDH_1SDV_20240503T031926_20240503T031942_053701_0685FB_E003 -o ./data - # Download by S3 path - phidown --s3path /eodata/Sentinel-1/SAR/IW_RAW__0S/2024/05/03/... -o ./data + # Download by direct S3 path + phidown --s3path /eodata/Sentinel-1/SAR/IW_GRDH_1S/2024/05/03/... -o ./data - # List products over AOI + dates - phidown --list --collection SENTINEL-1 --product-type GRD --bbox -5 40 5 45 --start-date 2024-01-01T00:00:00 --end-date 2024-01-31T23:59:59 + # List products + phidown list --collection SENTINEL-2 --product-type S2MSI2A --bbox 10 45 12 46 --start-date 2024-05-01T00:00:00 --end-date 2024-05-31T23:59:59 --format csv # Burst coverage analysis - phidown --burst-coverage --bbox -5 40 5 45 --start-date 2024-08-02T00:00:00 --end-date 2024-08-15T23:59:59 --polarisation VV + phidown --burst-coverage --bbox 10 45 12 46 --start-date 2024-08-02T00:00:00 --end-date 2024-08-20T23:59:59 --polarisation VV --format json -Available CLI options: +Use ``--mode safe`` on download commands to prioritize resumable native +downloads. Use ``--mode fast`` to prefer the ``s5cmd`` transfer path. -* ``--name``: Download by product name -* ``--s3path``: Download by S3 path (must start with /eodata/) -* ``--list``: List products over AOI/date filters -* ``--burst-coverage``: Run Sentinel-1 burst coverage analysis over AOI/date filters -* ``--aoi-wkt`` or ``--bbox``: AOI filter for listing/analysis -* ``--start-date`` and ``--end-date``: Time filters -* ``-o, --output-dir``: Local output directory (default: current directory) -* ``-c, --config-file``: Path to s5cmd configuration file (default: .s5cfg) -* ``--no-download-all``: Download only specific file instead of entire directory -* ``--reset``: Reset configuration file and prompt for new credentials +If your credentials file is not in the current working directory, pass it +explicitly: -For full CLI documentation and examples, see :doc:`cli`. +.. code-block:: bash -Interactive Tools ------------------ + phidown --name PRODUCT_NAME -o ./data -c ~/.config/phidown/cdse.s5cfg -Φ-Down provides interactive tools for Jupyter notebooks. +Interactive Polygon Tools +------------------------- -Polygon Selection -^^^^^^^^^^^^^^^^^ +Interactive polygon selection requires the optional notebook dependencies. .. code-block:: python - from phidown import create_polygon_tool + from phidown import create_polygon_tool, search_with_polygon - # Create an interactive map for polygon selection - tool = create_polygon_tool() + tool = create_polygon_tool(center=(45.0, 9.0), zoom=8, basemap_type="satellite") tool.display() -After drawing a polygon, get the WKT: - -.. code-block:: python - - wkt = tool.get_wkt() - print(f"Selected area: {wkt}") - -Search with Polygon -^^^^^^^^^^^^^^^^^^^ - -.. code-block:: python - - from phidown import search_with_polygon - - # Interactive search with polygon selection + # After drawing at least one polygon in the notebook: results = search_with_polygon( - collection_name='SENTINEL-2', - start_date='2023-01-01', - end_date='2023-01-31' + tool, + collection_name="SENTINEL-2", + product_type="S2MSI1C", + start_date="2024-06-01T00:00:00", + end_date="2024-06-30T23:59:59", + top=10, ) -Visualization -------------- +Plotting Footprints +------------------- -Plot search results and coordinates: +Use ``plot_product_footprints()`` with a results DataFrame: .. code-block:: python - from phidown import plot_kml_coordinates - - # Plot results on a map - plot_kml_coordinates(results) - -Best Practices --------------- - -1. **Use specific date ranges** to avoid large result sets -2. **Filter by cloud cover** for optical missions -3. **Use S3 credentials** for faster downloads -4. **Check data availability** before downloading -5. **Organize downloads** by mission and date - -Error Handling --------------- - -Common errors and solutions: - -**Authentication Error**: - Check your credentials and account status. + from phidown import CopernicusDataSearcher, plot_product_footprints -**Network Timeout**: - Use S3 credentials or retry with smaller batches. + aoi_wkt = "POLYGON((12.4 41.9, 12.5 41.9, 12.5 42.0, 12.4 42.0, 12.4 41.9))" -**Invalid WKT**: - Ensure your polygon coordinates are valid and in the correct order. + searcher = CopernicusDataSearcher() + searcher.query_by_filter( + collection_name="SENTINEL-1", + product_type="SLC", + aoi_wkt=aoi_wkt, + start_date="2024-08-01T00:00:00", + end_date="2024-08-05T23:59:59", + top=20, + ) + results = searcher.execute_query() -**Product Not Found**: - Verify the product ID and availability. + footprint_map = plot_product_footprints(results, aoi_wkt=aoi_wkt, top_n=10) + footprint_map.save("footprints.html") -Example workflow: +``plot_kml_coordinates()`` is available when you want to render a KML overlay +instead of a search result DataFrame. -.. code-block:: python +AIS Data +-------- - from phidown import CopernicusDataSearcher - from phidown.s5cmd_utils import download as pull_down - - try: - searcher = CopernicusDataSearcher() - results = searcher.search( - collection_name='SENTINEL-2', - aoi_wkt=wkt, - start_date='2023-01-01', - end_date='2023-01-31' - ) - - if len(results) > 0: - # Assuming results contain S3Path column - s3_path = results.iloc[0]['S3Path'] - pull_down( - s3_path=s3_path, - output_dir='./data', - config_file='.s5cfg' - ) - else: - print("No products found for the given criteria") - - except Exception as e: - print(f"Error: {e}") - print("Please check your credentials and search parameters") - -Configuration -------------- - -Φ-Down uses a configuration file to support different missions and product types. The configuration is automatically loaded, but you can customize it if needed. - -Custom Configuration -^^^^^^^^^^^^^^^^^^^^^ - -Create a custom ``config.json`` file: - -.. code-block:: json - - { - "SENTINEL-2": { - "product_types": ["L1C", "L2A"], - "description": "Multi-spectral imaging mission" - }, - "SENTINEL-1": { - "product_types": ["GRD", "SLC", "OCN"], - "description": "Synthetic Aperture Radar mission" - } - } - -Load custom configuration: +AIS support is optional and documented in more detail in :doc:`ais_guide`. .. code-block:: python - searcher = CopernicusDataSearcher() - searcher.config = searcher._load_config('path/to/config.json') - -Performance Tips ----------------- + from phidown import download_ais_data -1. **Use specific search criteria** to reduce API calls -2. **Batch downloads** efficiently -3. **Use S3 for large files** -4. **Cache search results** to avoid repeated queries -5. **Monitor quota usage** to avoid rate limits + df = download_ais_data( + start_date="2025-08-25", + end_date="2025-08-26", + start_time="10:00:00", + end_time="12:00:00", + aoi_wkt="POLYGON((4.0 51.0,5.0 51.0,5.0 52.0,4.0 52.0,4.0 51.0))", + ) -.. code-block:: python +Tips +---- - # Efficient batch processing - from phidown.s5cmd_utils import download as pull_down - import time - - batch_size = 10 - for i in range(0, len(results), batch_size): - batch = results.iloc[i:i+batch_size] - for idx, row in batch.iterrows(): - s3_path = row['S3Path'] # Assuming S3Path is available in results - pull_down( - s3_path=s3_path, - output_dir='./data', - config_file='.s5cfg' - ) - time.sleep(1) # Be respectful to the API +* Prefer narrow date windows and explicit AOIs to keep result sets manageable. +* Use ``query_by_name()`` when you already know the exact product identifier. +* Install the matching optional extras before using notebooks, plotting, or AIS helpers. +* Use ``mode="safe"`` or CLI ``--mode safe`` for longer downloads. +* Keep your ``.s5cfg`` in a predictable location and pass it explicitly in + automation instead of relying on the current working directory. diff --git a/how_to_start.ipynb b/how_to_start.ipynb index c97aaff..6dd911d 100644 --- a/how_to_start.ipynb +++ b/how_to_start.ipynb @@ -57,137 +57,9 @@ }, { "cell_type": "code", - "execution_count": 1, + "execution_count": null, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "Number of results: 910\n" - ] - }, - { - "data": { - "text/html": [ - "
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" - ] - }, - "execution_count": 1, - "metadata": {}, - "output_type": "execute_result" - } - ], + "outputs": [], "source": [ "from phidown.search import CopernicusDataSearcher\n", "\n", @@ -578,119 +182,9 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": null, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "Searching for product with exact name: S1A_IW_GRDH_1SDV_20141031T161924_20141031T161949_003076_003856_634E.SAFE\n", - "\n" - ] - }, - { - "data": { - "text/html": [ - "
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" - ] - }, - "metadata": {}, - "output_type": "display_data" - } - ], + "outputs": [], "source": [ "from phidown.search import CopernicusDataSearcher\n", "\n", @@ -723,38 +217,93 @@ "Stay secure — always clean up your credentials!" ] }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "### Download Modes\n", + "\n", + "The `download_product` method now supports different download modes for flexibility and reliability:\n", + "\n", + "- **`mode='fast'`** (default): Uses s5cmd for faster parallel downloads. Best for stable connections and faster downloads.\n", + "- **`mode='safe'`**: Uses resumable native downloads that can handle interruptions. Best for unstable connections or when you need automatic resume capability. **Requires boto3**: `pip install boto3`\n", + "\n", + "#### Additional Parameters:\n", + "- `retry_count`: Number of retry attempts on failure (default: 1). Safe mode will automatically retry on network errors with exponential backoff.\n", + "- `connect_timeout`: Connection timeout in seconds for safe mode (default: 30.0)\n", + "- `read_timeout`: Read timeout in seconds for safe mode (default: None)\n", + "- `state_file`: Path to state file for resume tracking in safe mode\n", + "- `s5cmd_retry_count`: Internal retry count for s5cmd in fast mode\n", + "- `max_workers`: Number of parallel workers for fast mode\n", + "- `backoff_base`: Base delay in seconds for exponential backoff (default: 2.0)\n", + "- `backoff_max`: Maximum delay in seconds between retries (default: 60.0)\n", + "- `show_progress`: Display progress bar (default: True)\n", + "\n", + "**Retry Behavior**: When safe mode encounters network errors, it will automatically retry with clear status messages:\n", + "- 🔄 Shows attempt number before each download\n", + "- ⚠️ Displays retry countdown when errors occur\n", + "- ✅ Confirms successful completion\n", + "\n", + "**Recommendation**: Use `'fast'` mode for most cases. Use `'safe'` mode with `retry_count=5` or higher for unstable connections." + ] + }, { "cell_type": "code", - "execution_count": 1, + "execution_count": null, "metadata": {}, - "outputs": [ - { - "name": "stdout", - "output_type": "stream", - "text": [ - "Downloading product: S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE\n", - "Output directory: /Users/robertodelprete/Desktop/PyProjects/sar/phidown\n", - "Pulling down from S3 path: /eodata/Sentinel-1/SAR/S3_SLC__1S/2024/04/30/S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE\n" - ] - }, - { - "name": "stderr", - "output_type": "stream", - "text": [ - "INFO:phidown.s5cmd_utils:Created configuration file: .s5cfg\n", - "INFO:phidown.s5cmd_utils:Downloading from: s3://eodata/Sentinel-1/SAR/S3_SLC__1S/2024/04/30/S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE/*\n", - "INFO:phidown.s5cmd_utils:Output directory: /Users/robertodelprete/Desktop/PyProjects/sar/phidown/S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE\n", - "INFO:phidown.s5cmd_utils:Running command: s5cmd --endpoint-url https://eodata.dataspace.copernicus.eu cp s3://eodata/Sentinel-1/SAR/S3_SLC__1S/2024/04/30/S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE/* /Users/robertodelprete/Desktop/PyProjects/sar/phidown/S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE/\n" - ] - } - ], + "outputs": [], "source": [ "from phidown.search import CopernicusDataSearcher\n", "\n", "searcher = CopernicusDataSearcher() \n", "\n", "filename = 'S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE'\n", - "searcher.download_product(filename, output_dir='.')" + "\n", + "# Example 1: Fast mode (default) - Uses s5cmd for faster downloads\n", + "print(\"=== Fast Mode Download ===\")\n", + "success = searcher.download_product(\n", + " filename, \n", + " output_dir='.', \n", + " mode='fast',\n", + " retry_count=3,\n", + " show_progress=True\n", + ")\n", + "print(f\"Download successful: {success}\\n\")" + ] + }, + { + "cell_type": "markdown", + "metadata": {}, + "source": [ + "#### Example 2: Safe mode - Resumable downloads (requires boto3): using Safe Mode\n", + "\n", + "To use safe mode for resumable downloads, you need to install boto3 first:" + ] + }, + { + "cell_type": "code", + "execution_count": null, + "metadata": {}, + "outputs": [], + "source": [ + "# Example: Safe mode with resumable downloads and automatic retries\n", + "# After installing boto3, you can use safe mode for unstable connections\n", + "# The download will automatically retry on network errors with status messages\n", + "from phidown.search import CopernicusDataSearcher\n", + "\n", + "searcher = CopernicusDataSearcher() \n", + "filename = 'S1A_S3_SLC__1SDH_20240430T213606_20240430T213631_053668_0684A3_FCED.SAFE'\n", + "\n", + "success = searcher.download_product(\n", + " filename, \n", + " output_dir='.', \n", + " mode='safe',\n", + " retry_count=10, # Will retry up to 10 times with exponential backoff\n", + " connect_timeout=10.0,\n", + " read_timeout=300.0,\n", + " show_progress=True\n", + ")\n", + "print(f\"Download successful: {success}\")" ] } ], diff --git a/notebooks/1_search_n_download.ipynb b/notebooks/1_search_n_download.ipynb index 270e469..a61731e 100644 --- a/notebooks/1_search_n_download.ipynb +++ b/notebooks/1_search_n_download.ipynb @@ -22,136 +22,18 @@ }, { "cell_type": "code", - "execution_count": 2, + "execution_count": null, "id": "10d56e22", "metadata": {}, "outputs": [ { - "name": "stdout", - "output_type": "stream", - "text": [ - "Number of results: 5337\n" + "ename": "", + "evalue": "", + "output_type": "error", + "traceback": [ + "\u001b[1;31mFailed to start the Kernel. \n", + "\u001b[1;31mView Jupyter log for further details." ] - }, - { - "data": { - "text/html": [ - "
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" - ] - }, - "execution_count": 2, - "metadata": {}, - "output_type": "execute_result" } ], "source": [ @@ -254,21 +136,9 @@ ], "metadata": { "kernelspec": { - "display_name": "phidown-3.9", + "display_name": "Python 3.12 (py312)", "language": "python", - "name": "python3" - }, - "language_info": { - "codemirror_mode": { - "name": "ipython", - "version": 3 - }, - "file_extension": ".py", - "mimetype": "text/x-python", - "name": "python", - "nbconvert_exporter": "python", - "pygments_lexer": "ipython3", - "version": "3.9.18" + "name": "py312" } }, "nbformat": 4, diff --git a/phidown/__init__.py b/phidown/__init__.py index ab7d20e..749c648 100644 --- a/phidown/__init__.py +++ b/phidown/__init__.py @@ -1,73 +1,94 @@ -# __init__.py +"""Top-level package exports for phidown.""" -""" -Package Initialization -""" +from __future__ import annotations + +from importlib import import_module +from importlib.util import find_spec +import sys +from typing import Dict, Iterable, Tuple __version__ = "0.1.25" __author__ = "Roberto Del Prete" -# Import main classes and functions -from .search import CopernicusDataSearcher -from .viz import plot_kml_coordinates, plot_product_footprints -from .insar_workflow import ( - BurstSearchConfig, - BurstWorkflowConfig, - build_burst_workflow_config, - run_burst_workflow, - validate_burst_results, - debug_burst_summary, -) - -# Lazy import CLI functions to avoid import conflicts -# These will be imported on first use -def __getattr__(name): - """Lazy import for CLI functions.""" - if name == 'download_by_name': - from .cli import download_by_name - return download_by_name - elif name == 'download_by_s3path': - from .cli import download_by_s3path - return download_by_s3path - raise AttributeError(f"module '{__name__}' has no attribute '{name}'") - -# Import AIS functionality (optional dependency) -try: - from .ais import AISDataHandler, download_ais_data - _AIS_AVAILABLE = True -except ImportError: - # huggingface_hub not available - _AIS_AVAILABLE = False - -# Note: Downloader functions are available but not imported at package level -# to avoid module execution conflicts. Import them directly if needed: -# from phidown.downloader import pull_down, load_credentials, get_access_token - -# Import interactive tools (optional dependency) -try: - from .interactive_tools import InteractivePolygonTool, create_polygon_tool, search_with_polygon - _INTERACTIVE_AVAILABLE = True -except ImportError: - # ipyleaflet and ipywidgets not available - _INTERACTIVE_AVAILABLE = False - -# Build __all__ dynamically based on available dependencies -__all__ = [ - 'CopernicusDataSearcher', - 'plot_kml_coordinates', - 'plot_product_footprints', - 'BurstSearchConfig', - 'BurstWorkflowConfig', - 'build_burst_workflow_config', - 'run_burst_workflow', - 'validate_burst_results', - 'debug_burst_summary', - 'download_by_name', - 'download_by_s3path' +_LAZY_EXPORTS: Dict[str, Tuple[str, str]] = { + "CopernicusDataSearcher": ("phidown.search", "CopernicusDataSearcher"), + "plot_kml_coordinates": ("phidown.viz", "plot_kml_coordinates"), + "plot_product_footprints": ("phidown.viz", "plot_product_footprints"), + "BurstSearchConfig": ("phidown.insar_workflow", "BurstSearchConfig"), + "BurstWorkflowConfig": ("phidown.insar_workflow", "BurstWorkflowConfig"), + "build_burst_workflow_config": ("phidown.insar_workflow", "build_burst_workflow_config"), + "run_burst_workflow": ("phidown.insar_workflow", "run_burst_workflow"), + "validate_burst_results": ("phidown.insar_workflow", "validate_burst_results"), + "debug_burst_summary": ("phidown.insar_workflow", "debug_burst_summary"), + "download_by_name": ("phidown.cli", "download_by_name"), + "download_by_s3path": ("phidown.cli", "download_by_s3path"), + "AISDataHandler": ("phidown.ais", "AISDataHandler"), + "download_ais_data": ("phidown.ais", "download_ais_data"), + "InteractivePolygonTool": ("phidown.interactive_tools", "InteractivePolygonTool"), + "create_polygon_tool": ("phidown.interactive_tools", "create_polygon_tool"), + "search_with_polygon": ("phidown.interactive_tools", "search_with_polygon"), +} + +_OPTIONAL_DEPENDENCIES: Dict[str, Tuple[str, ...]] = { + "plot_kml_coordinates": ("folium",), + "plot_product_footprints": ("folium",), + "AISDataHandler": ("huggingface_hub",), + "download_ais_data": ("huggingface_hub",), + "InteractivePolygonTool": ("ipyleaflet", "ipywidgets", "shapely"), + "create_polygon_tool": ("ipyleaflet", "ipywidgets", "shapely"), + "search_with_polygon": ("ipyleaflet", "ipywidgets", "shapely"), +} + +_BASE_EXPORTS = [ + "CopernicusDataSearcher", + "BurstSearchConfig", + "BurstWorkflowConfig", + "build_burst_workflow_config", + "run_burst_workflow", + "validate_burst_results", + "debug_burst_summary", + "download_by_name", + "download_by_s3path", ] -if _AIS_AVAILABLE: - __all__.extend(['AISDataHandler', 'download_ais_data']) -if _INTERACTIVE_AVAILABLE: - __all__.extend(['InteractivePolygonTool', 'create_polygon_tool', 'search_with_polygon']) +def _dependencies_available(dependencies: Iterable[str]) -> bool: + """Check whether the named import dependencies are importable.""" + for name in dependencies: + if name in sys.modules: + continue + try: + if find_spec(name) is None: + return False + except (ImportError, ValueError): + return False + return True + + +def _optional_import_error(name: str, dependencies: Tuple[str, ...]) -> ImportError: + joined = ", ".join(dependencies) + return ImportError(f"{name} requires optional dependencies: {joined}") + + +def __getattr__(name: str): + """Resolve public exports lazily to avoid eager optional imports.""" + if name not in _LAZY_EXPORTS: + raise AttributeError(f"module '{__name__}' has no attribute '{name}'") + + dependencies = _OPTIONAL_DEPENDENCIES.get(name) + if dependencies and not _dependencies_available(dependencies): + raise _optional_import_error(name, dependencies) + + module_name, attribute_name = _LAZY_EXPORTS[name] + module = import_module(module_name) + return getattr(module, attribute_name) + + +def __dir__() -> list[str]: + return sorted(set(globals()) | set(_LAZY_EXPORTS)) + + +__all__ = list(_BASE_EXPORTS) +for export_name, dependencies in _OPTIONAL_DEPENDENCIES.items(): + if _dependencies_available(dependencies): + __all__.append(export_name) diff --git a/phidown/cli.py b/phidown/cli.py index 6493dcd..c76a8df 100644 --- a/phidown/cli.py +++ b/phidown/cli.py @@ -9,11 +9,16 @@ import os import logging import json +import time +import random +import warnings from pathlib import Path from typing import Optional, List, Sequence, Union from .search import CopernicusDataSearcher from .s5cmd_utils import pull_down +from .download_state import DownloadStateStore, default_state_file, is_product_complete +from .native_download import download_s3_resumable # Configure logger logging.basicConfig( @@ -24,6 +29,67 @@ logger = logging.getLogger(__name__) +def _compute_backoff_delay(attempt_index: int, backoff_base: float, backoff_max: float) -> float: + """Compute retry delay with exponential backoff and jitter.""" + exponential = backoff_base * (2 ** attempt_index) + return min(backoff_max, exponential) + random.uniform(0.0, 0.5) + + +def _dir_has_files(directory: str) -> bool: + if not os.path.isdir(directory): + return False + return any(os.path.isfile(os.path.join(directory, name)) for name in os.listdir(directory)) + + +def _warn_deprecated_option(option_name: str, replacement: str) -> None: + warnings.warn( + f'{option_name} is deprecated; use {replacement} instead.', + DeprecationWarning, + stacklevel=3, + ) + + +def _resolve_download_mode( + mode: str = 'fast', + *, + resume_mode: Optional[str] = None, + connect_timeout: float = 30.0, + read_timeout: Optional[float] = None, + robust: bool = False, +) -> str: + if mode not in {'fast', 'safe'}: + raise ValueError("mode must be either 'fast' or 'safe'") + if resume_mode is not None and resume_mode not in {'off', 'product'}: + raise ValueError("resume_mode must be either 'off' or 'product'") + + effective_mode = mode + if resume_mode is not None: + if mode == 'safe' and resume_mode == 'off': + warnings.warn( + 'Both mode and resume_mode were provided; resume_mode="off" is deprecated and does not override explicit mode="safe".', + DeprecationWarning, + stacklevel=3, + ) + elif mode == 'fast' and resume_mode == 'product': + warnings.warn( + 'Both mode and resume_mode were provided; legacy resume_mode="product" overrides mode="fast" and maps to mode="safe".', + DeprecationWarning, + stacklevel=3, + ) + effective_mode = 'safe' + if robust: + _warn_deprecated_option('--robust', '--mode safe') + effective_mode = 'safe' + if resume_mode is not None and resume_mode == 'product' and not (mode == 'fast' and resume_mode == 'product'): + # Keep compatibility with callers passing only the deprecated flag. + _warn_deprecated_option('resume_mode/--resume-mode', 'mode/--mode') + effective_mode = 'safe' if resume_mode == 'product' else 'fast' + if effective_mode == 'fast' and (read_timeout is not None or float(connect_timeout) != 30.0): + _warn_deprecated_option('connect_timeout/read_timeout', 'mode="safe"') + effective_mode = 'safe' + return effective_mode + + def _parse_bbox_to_wkt(bbox: Union[str, Sequence[float]]) -> str: """Convert bbox values (csv string or 4-item sequence) to WKT polygon.""" if isinstance(bbox, str): @@ -67,8 +133,18 @@ def download_by_name( product_name: str, output_dir: str, config_file: str = '.s5cfg', + mode: str = 'fast', show_progress: bool = True, - reset_config: bool = False + reset_config: bool = False, + retry_count: int = 1, + connect_timeout: float = 30.0, + read_timeout: Optional[float] = None, + state_file: Optional[str] = None, + resume_mode: Optional[str] = None, + s5cmd_retry_count: Optional[int] = None, + max_workers: Optional[int] = None, + backoff_base: float = 2.0, + backoff_max: float = 60.0, ) -> bool: """Download a product by its name from Copernicus Data Space. @@ -76,8 +152,18 @@ def download_by_name( product_name: Full name of the Copernicus product to download. output_dir: Directory where the product will be downloaded. config_file: Path to s5cmd configuration file with credentials. + mode: Download mode ('fast' for s5cmd, 'safe' for resumable native downloads). show_progress: Whether to display download progress bar. reset_config: Whether to reset configuration and prompt for credentials. + retry_count: Number of command-level retry attempts. + connect_timeout: Network connection timeout in seconds for native transfers. + read_timeout: Network read timeout in seconds for native transfers. + state_file: Optional JSON state file path for resumable runs. + resume_mode: Deprecated legacy resume selector. Prefer ``mode``. + s5cmd_retry_count: Optional internal retry count for s5cmd. + max_workers: Optional worker count for s5cmd. + backoff_base: Base delay in seconds for retry backoff. + backoff_max: Max delay in seconds for retry backoff. Returns: bool: True if download was successful, False otherwise. @@ -89,6 +175,12 @@ def download_by_name( ... ) """ try: + effective_mode = _resolve_download_mode( + mode, + resume_mode=resume_mode, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + ) logger.info(f'🔍 Searching for product: {product_name}') # Search for the product @@ -112,20 +204,124 @@ def download_by_name( # Download the product logger.info(f'⬇️ Starting download to: {output_dir}') - - success = pull_down( - s3_path=s3_path, - output_dir=os.path.abspath(output_dir), - config_file=config_file, - total_size=content_length, - show_progress=show_progress, - reset=reset_config - ) - + + abs_output_dir = os.path.abspath(output_dir) + safe_name = os.path.basename(s3_path.rstrip('/')) + product_dir = os.path.join(abs_output_dir, safe_name) + use_native = effective_mode == 'safe' + + state_store: Optional[DownloadStateStore] = None + state_item_id = f'name:{product_name}' + if not use_native and resume_mode not in (None, 'off'): + resolved_state_file = state_file or default_state_file(abs_output_dir) + state_store = DownloadStateStore(resolved_state_file) + + if is_product_complete(product_dir): + state_store.mark( + state_item_id, + 'success', + output_path=product_dir, + extra={'product_name': product_name, 's3_path': s3_path} + ) + logger.info('⏭️ Product already downloaded, skipping.') + return True + + existing = state_store.get(state_item_id) + existing_output = existing.get('output_path') if isinstance(existing, dict) else None + if existing and existing.get('status') == 'success' and existing_output and is_product_complete(existing_output): + logger.info('⏭️ Product already downloaded (state file), skipping.') + return True + + success = False + attempts = max(1, int(retry_count)) + last_error = None + should_reset_config = reset_config + for attempt in range(attempts): + try: + if state_store is not None: + state_store.mark( + state_item_id, + 'in_progress', + attempts=attempt + 1, + output_path=product_dir, + extra={'product_name': product_name, 's3_path': s3_path} + ) + + if use_native: + attempt_reset = should_reset_config + should_reset_config = False + result = download_s3_resumable( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + download_all=True, + state_file=state_file, + state_item_id=state_item_id, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + show_progress=show_progress, + attempts=attempt + 1, + persist_state=True, + reset_config=attempt_reset, + ) + if result.status == 'skipped': + logger.info('⏭️ Product already downloaded, skipping.') + return True + if not is_product_complete(result.output_path): + raise ValueError('manifest.safe not found - download may be incomplete') + else: + attempt_reset = should_reset_config + should_reset_config = False + pull_down( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + total_size=content_length, + show_progress=show_progress, + reset=attempt_reset, + retry_count=1, + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, + backoff_base=backoff_base, + backoff_max=backoff_max, + ) + + if not is_product_complete(product_dir): + raise ValueError('manifest.safe not found - download may be incomplete') + + if state_store is not None: + state_store.mark( + state_item_id, + 'success', + attempts=attempt + 1, + output_path=product_dir, + extra={'product_name': product_name, 's3_path': s3_path} + ) + success = True + break + except Exception as e: + last_error = str(e) + if state_store is not None: + state_store.mark( + state_item_id, + 'failed', + attempts=attempt + 1, + output_path=product_dir, + error=last_error, + extra={'product_name': product_name, 's3_path': s3_path} + ) + if attempt < attempts - 1: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + logger.warning( + f'⚠️ Attempt {attempt + 1}/{attempts} failed ({e}). ' + f'Retrying in {delay:.1f}s...' + ) + time.sleep(delay) + if success: logger.info('✅ Download completed successfully!') else: - logger.error('❌ Download failed!') + logger.error(f'❌ Download failed! {last_error}') return success @@ -138,9 +334,19 @@ def download_by_s3path( s3_path: str, output_dir: str, config_file: str = '.s5cfg', + mode: str = 'fast', show_progress: bool = True, reset_config: bool = False, - download_all: bool = True + download_all: bool = True, + retry_count: int = 1, + connect_timeout: float = 30.0, + read_timeout: Optional[float] = None, + state_file: Optional[str] = None, + resume_mode: Optional[str] = None, + s5cmd_retry_count: Optional[int] = None, + max_workers: Optional[int] = None, + backoff_base: float = 2.0, + backoff_max: float = 60.0, ) -> bool: """Download a product directly using its S3 path. @@ -148,9 +354,19 @@ def download_by_s3path( s3_path: S3 path of the product (starting with /eodata/). output_dir: Directory where the product will be downloaded. config_file: Path to s5cmd configuration file with credentials. + mode: Download mode ('fast' for s5cmd, 'safe' for resumable native downloads). show_progress: Whether to display download progress bar. reset_config: Whether to reset configuration and prompt for credentials. download_all: If True, downloads entire directory; otherwise specific file. + retry_count: Number of command-level retry attempts. + connect_timeout: Network connection timeout in seconds for native transfers. + read_timeout: Network read timeout in seconds for native transfers. + state_file: Optional JSON state file path for resumable runs. + resume_mode: Deprecated legacy resume selector. Prefer ``mode``. + s5cmd_retry_count: Optional internal retry count for s5cmd. + max_workers: Optional worker count for s5cmd. + backoff_base: Base delay in seconds for retry backoff. + backoff_max: Max delay in seconds for retry backoff. Returns: bool: True if download was successful, False otherwise. @@ -165,23 +381,135 @@ def download_by_s3path( if not s3_path.startswith('/eodata/'): logger.error(f'❌ Invalid S3 path format. Must start with /eodata/') return False + effective_mode = _resolve_download_mode( + mode, + resume_mode=resume_mode, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + ) logger.info(f'📦 S3 Path: {s3_path}') logger.info(f'⬇️ Starting download to: {output_dir}') - - success = pull_down( - s3_path=s3_path, - output_dir=os.path.abspath(output_dir), - config_file=config_file, - show_progress=show_progress, - reset=reset_config, - download_all=download_all - ) + + abs_output_dir = os.path.abspath(output_dir) + safe_name = os.path.basename(s3_path.rstrip('/')) + target_dir = os.path.join(abs_output_dir, safe_name) + use_native = effective_mode == 'safe' + + state_store: Optional[DownloadStateStore] = None + state_item_id = f's3:{s3_path}' + if not use_native and resume_mode not in (None, 'off'): + resolved_state_file = state_file or default_state_file(abs_output_dir) + state_store = DownloadStateStore(resolved_state_file) + + already_complete = is_product_complete(target_dir) if download_all else _dir_has_files(target_dir) + if already_complete: + state_store.mark( + state_item_id, + 'success', + output_path=target_dir, + extra={'s3_path': s3_path} + ) + logger.info('⏭️ Target already downloaded, skipping.') + return True + + existing = state_store.get(state_item_id) + existing_output = existing.get('output_path') if isinstance(existing, dict) else None + if existing and existing.get('status') == 'success' and existing_output: + complete_from_state = ( + is_product_complete(existing_output) if download_all else _dir_has_files(existing_output) + ) + if complete_from_state: + logger.info('⏭️ Target already downloaded (state file), skipping.') + return True + + success = False + attempts = max(1, int(retry_count)) + last_error = None + should_reset_config = reset_config + for attempt in range(attempts): + try: + if state_store is not None: + state_store.mark( + state_item_id, + 'in_progress', + attempts=attempt + 1, + output_path=target_dir, + extra={'s3_path': s3_path} + ) + + if use_native: + attempt_reset = should_reset_config + should_reset_config = False + result = download_s3_resumable( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + download_all=download_all, + state_file=state_file, + state_item_id=state_item_id, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + show_progress=show_progress, + attempts=attempt + 1, + persist_state=True, + reset_config=attempt_reset, + ) + if result.status == 'skipped': + logger.info('⏭️ Target already downloaded, skipping.') + return True + if download_all and not is_product_complete(result.output_path): + raise ValueError('manifest.safe not found - download may be incomplete') + else: + attempt_reset = should_reset_config + should_reset_config = False + pull_down( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + show_progress=show_progress, + reset=attempt_reset, + download_all=download_all, + retry_count=1, + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, + backoff_base=backoff_base, + backoff_max=backoff_max, + ) + + if state_store is not None: + state_store.mark( + state_item_id, + 'success', + attempts=attempt + 1, + output_path=target_dir, + extra={'s3_path': s3_path} + ) + success = True + break + except Exception as e: + last_error = str(e) + if state_store is not None: + state_store.mark( + state_item_id, + 'failed', + attempts=attempt + 1, + output_path=target_dir, + error=last_error, + extra={'s3_path': s3_path} + ) + if attempt < attempts - 1: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + logger.warning( + f'⚠️ Attempt {attempt + 1}/{attempts} failed ({e}). ' + f'Retrying in {delay:.1f}s...' + ) + time.sleep(delay) if success: logger.info('✅ Download completed successfully!') else: - logger.error('❌ Download failed!') + logger.error(f'❌ Download failed! {last_error}') return success @@ -524,6 +852,12 @@ def main() -> None: action='store_true', help='Reset configuration file and prompt for new credentials' ) + parser.add_argument( + '--mode', + choices=['fast', 'safe'], + default='fast', + help='Download mode: fast uses s5cmd, safe uses resumable native downloads' + ) # Download options parser.add_argument( @@ -538,6 +872,59 @@ def main() -> None: help='Download specific file instead of entire directory (for S3 path only)' ) + # Robustness options + parser.add_argument( + '--robust', + action='store_true', + help='Deprecated legacy preset. Prefer --mode safe' + ) + parser.add_argument( + '--retry-count', + type=int, + help='Number of command-level retry attempts for downloads' + ) + parser.add_argument( + '--connect-timeout', + type=float, + help='Network connection timeout in seconds' + ) + parser.add_argument( + '--read-timeout', + type=float, + help='Network read timeout in seconds' + ) + parser.add_argument( + '--resume-mode', + choices=['off', 'product'], + default=None, + help='Deprecated legacy resume selector. Prefer --mode {fast,safe}' + ) + parser.add_argument( + '--state-file', + type=str, + help='Path to JSON state file used for resumable downloads' + ) + parser.add_argument( + '--s5cmd-retry-count', + type=int, + help='Internal retry count passed to s5cmd (--retry-count)' + ) + parser.add_argument( + '--max-workers', + type=int, + help='Number of workers passed to s5cmd (--numworkers)' + ) + parser.add_argument( + '--backoff-base', + type=float, + help='Base delay in seconds for exponential retry backoff' + ) + parser.add_argument( + '--backoff-max', + type=float, + help='Maximum delay in seconds for exponential retry backoff' + ) + # Product listing options parser.add_argument( '--collection', @@ -648,6 +1035,23 @@ def main() -> None: # Set logging level if args.verbose: logging.getLogger().setLevel(logging.DEBUG) + + effective_mode = _resolve_download_mode( + args.mode, + resume_mode=args.resume_mode, + connect_timeout=args.connect_timeout if args.connect_timeout is not None else 30.0, + read_timeout=args.read_timeout, + robust=args.robust, + ) + effective_retry_count = args.retry_count if args.retry_count is not None else (5 if effective_mode == 'safe' else 1) + effective_connect_timeout = args.connect_timeout if args.connect_timeout is not None else 30.0 + effective_read_timeout = args.read_timeout if args.read_timeout is not None else (900.0 if effective_mode == 'safe' else None) + effective_backoff_base = args.backoff_base if args.backoff_base is not None else 2.0 + effective_backoff_max = args.backoff_max if args.backoff_max is not None else 60.0 + effective_s5cmd_retry_count = ( + args.s5cmd_retry_count if args.s5cmd_retry_count is not None else (10 if effective_mode == 'safe' else None) + ) + effective_max_workers = args.max_workers # Execute download based on input type try: @@ -698,8 +1102,18 @@ def main() -> None: product_name=args.name, output_dir=args.output_dir, config_file=args.config_file, + mode=effective_mode, show_progress=not args.no_progress, - reset_config=args.reset + reset_config=args.reset, + retry_count=effective_retry_count, + connect_timeout=effective_connect_timeout, + read_timeout=effective_read_timeout, + state_file=args.state_file, + resume_mode=args.resume_mode, + s5cmd_retry_count=effective_s5cmd_retry_count, + max_workers=effective_max_workers, + backoff_base=effective_backoff_base, + backoff_max=effective_backoff_max, ) elif args.s3path: # Create output directory only for download workflows @@ -709,9 +1123,19 @@ def main() -> None: s3_path=args.s3path, output_dir=args.output_dir, config_file=args.config_file, + mode=effective_mode, show_progress=not args.no_progress, reset_config=args.reset, - download_all=not args.no_download_all + download_all=not args.no_download_all, + retry_count=effective_retry_count, + connect_timeout=effective_connect_timeout, + read_timeout=effective_read_timeout, + state_file=args.state_file, + resume_mode=args.resume_mode, + s5cmd_retry_count=effective_s5cmd_retry_count, + max_workers=effective_max_workers, + backoff_base=effective_backoff_base, + backoff_max=effective_backoff_max, ) else: parser.error('Provide one mode: --name, --s3path, --list, or --burst-coverage') diff --git a/phidown/download_state.py b/phidown/download_state.py new file mode 100644 index 0000000..81e7a73 --- /dev/null +++ b/phidown/download_state.py @@ -0,0 +1,115 @@ +"""Download state persistence helpers for resumable workflows.""" + +from __future__ import annotations + +import json +import logging +import os +from datetime import datetime, timezone +from pathlib import Path +from typing import Any, Dict, Optional + +logger = logging.getLogger(__name__) + + +def utc_now_iso() -> str: + """Return the current UTC timestamp as ISO 8601 string.""" + return datetime.now(timezone.utc).isoformat() + + +def default_state_file(output_dir: str) -> str: + """Return the default state file path for an output directory. + + The state file is stored in a .phidown subdirectory to keep + download metadata separate from downloaded products. + """ + state_dir = Path(output_dir) / '.phidown' + state_dir.mkdir(parents=True, exist_ok=True) + return str(state_dir / 'download_state.json') + + +def is_product_complete(product_dir: str) -> bool: + """Check if a SAFE product directory looks complete.""" + if not os.path.isdir(product_dir): + return False + return os.path.exists(os.path.join(product_dir, 'manifest.safe')) + + +def is_non_empty_file(path: str) -> bool: + """Check if file exists and has non-zero size.""" + return os.path.isfile(path) and os.path.getsize(path) > 0 + + +class DownloadStateStore: + """Simple JSON-backed state store for download checkpoints.""" + + def __init__(self, state_file: str): + self.path = Path(state_file) + self.path.parent.mkdir(parents=True, exist_ok=True) + self._state: Dict[str, Any] = self._load() + + def _load(self) -> Dict[str, Any]: + if not self.path.exists(): + return {'items': {}} + + try: + raw = json.loads(self.path.read_text(encoding='utf-8')) + except Exception as exc: + logger.warning(f'Failed to read state file {self.path}: {exc}. Reinitializing state.') + return {'items': {}} + + if not isinstance(raw, dict): + return {'items': {}} + items = raw.get('items') + if not isinstance(items, dict): + return {'items': {}} + return {'items': items} + + def _persist(self) -> None: + payload = json.dumps(self._state, indent=2, sort_keys=True) + tmp_path = self.path.with_suffix(self.path.suffix + '.tmp') + tmp_path.write_text(payload, encoding='utf-8') + os.replace(tmp_path, self.path) + + def get(self, item_id: str) -> Optional[Dict[str, Any]]: + return self._state['items'].get(str(item_id)) + + def set(self, item_id: str, record: Dict[str, Any]) -> None: + self._state['items'][str(item_id)] = record + self._persist() + + def mark( + self, + item_id: str, + status: str, + *, + attempts: Optional[int] = None, + error: Optional[str] = None, + output_path: Optional[str] = None, + extra: Optional[Dict[str, Any]] = None, + ) -> None: + existing = self.get(item_id) or {} + record: Dict[str, Any] = { + 'status': status, + 'updated_at': utc_now_iso(), + } + + if attempts is not None: + record['attempts'] = int(attempts) + elif 'attempts' in existing: + record['attempts'] = existing['attempts'] + + if error is not None: + record['error'] = error + elif 'error' in existing and status != 'success': + record['error'] = existing['error'] + + if output_path is not None: + record['output_path'] = output_path + elif 'output_path' in existing: + record['output_path'] = existing['output_path'] + + if extra: + record.update(extra) + + self.set(item_id, record) diff --git a/phidown/downloader.py b/phidown/downloader.py index d28ff20..1a93e8b 100644 --- a/phidown/downloader.py +++ b/phidown/downloader.py @@ -7,6 +7,10 @@ import requests import uuid import time +import random +from typing import Optional, Union + +from .download_state import DownloadStateStore, default_state_file, is_non_empty_file TOKEN_URL = 'https://identity.dataspace.copernicus.eu/auth/realms/cdse/protocol/openid-connect/token' @@ -22,6 +26,19 @@ REQUEST_TIMEOUT_SECONDS = 30 +def _resolve_request_timeout(connect_timeout: Union[int, float], read_timeout: Optional[Union[int, float]]) -> Union[float, tuple]: + """Build requests timeout value from connect/read values.""" + if read_timeout is None: + return float(connect_timeout) + return (float(connect_timeout), float(read_timeout)) + + +def _compute_backoff_delay(attempt_index: int, backoff_base: float, backoff_max: float) -> float: + """Compute retry delay with exponential backoff and jitter.""" + exponential = backoff_base * (2 ** attempt_index) + return min(backoff_max, exponential) + random.uniform(0.0, 0.5) + + class TokenManager: """Manages OAuth2 tokens with automatic refresh for Copernicus Data Space. @@ -164,7 +181,14 @@ def download_burst_on_demand( burst_id: str, token, output_dir: Path, - insecure_skip_verify: bool = False + insecure_skip_verify: bool = False, + connect_timeout: Union[int, float] = REQUEST_TIMEOUT_SECONDS, + read_timeout: Optional[Union[int, float]] = None, + retry_count: int = 1, + backoff_base: float = 2.0, + backoff_max: float = 60.0, + state_file: Optional[str] = None, + resume_mode: str = 'off', ) -> None: """Download and save a Sentinel-1 burst product from CDSE. @@ -176,6 +200,13 @@ def download_burst_on_demand( burst_id: UUID of the burst to download from the CDSE catalogue. token: Either a TokenManager instance or a string access token. output_dir: Directory path where the burst ZIP file will be saved. + connect_timeout: HTTP connection timeout (seconds). + read_timeout: HTTP read timeout (seconds). If None, uses connect_timeout. + retry_count: Number of retry attempts on transient failures. + backoff_base: Base delay in seconds for exponential backoff. + backoff_max: Max delay in seconds for exponential backoff. + state_file: Optional path to JSON state file for resumable runs. + resume_mode: Resume mode ('off' or 'product'). Raises: ValueError: If burst_id or token is empty. @@ -194,6 +225,10 @@ def download_burst_on_demand( raise ValueError('Burst ID is required!') if not token: raise ValueError('Keycloak token is required!') + if resume_mode not in {'off', 'product'}: + raise ValueError("resume_mode must be either 'off' or 'product'") + + output_dir.mkdir(parents=True, exist_ok=True) try: uuid.UUID(burst_id) @@ -205,69 +240,167 @@ def download_burst_on_demand( if insecure_skip_verify: logger.warning('⚠️ TLS certificate verification is disabled (insecure_skip_verify=True).') - def _post_with_token(url: str, force_refresh: bool = False): + timeout_value = _resolve_request_timeout(connect_timeout=connect_timeout, read_timeout=read_timeout) + attempts = max(1, int(retry_count)) + state_store: Optional[DownloadStateStore] = None + if resume_mode != 'off': + resolved_state_file = state_file or default_state_file(str(output_dir)) + state_store = DownloadStateStore(resolved_state_file) + existing = state_store.get(burst_id) + existing_output = existing.get('output_path') if isinstance(existing, dict) else None + if existing and existing.get('status') == 'success' and existing_output and is_non_empty_file(existing_output): + logger.info(f'⏭️ Burst {burst_id} already downloaded, skipping.') + return + + def _post_with_token(url: str, force_refresh: bool = False, range_start: Optional[int] = None): if isinstance(token, TokenManager): if force_refresh: token.refresh_access_token() token_str = token.get_access_token() else: token_str = token + headers = {'Authorization': f'Bearer {token_str}'} + if range_start is not None and range_start > 0: + headers['Range'] = f'bytes={range_start}-' return requests.post( url, - headers={'Authorization': f'Bearer {token_str}'}, + headers=headers, verify=not insecure_skip_verify, allow_redirects=False, stream=True, - timeout=REQUEST_TIMEOUT_SECONDS, + timeout=timeout_value, ) - def _post_with_auth_retry(url: str): - response = _post_with_token(url) + def _post_with_auth_retry(url: str, range_start: Optional[int] = None): + response = _post_with_token(url, range_start=range_start) if response.status_code in (401, 403) and isinstance(token, TokenManager): logger.warning( f'⚠️ Received {response.status_code} from burst API. Refreshing token and retrying once.' ) - response = _post_with_token(url, force_refresh=True) + response = _post_with_token(url, force_refresh=True, range_start=range_start) return response - response = _post_with_auth_retry( - f'https://catalogue.dataspace.copernicus.eu/odata/v1/Bursts({burst_id})/$value' - ) + last_error: Optional[Exception] = None + for attempt in range(attempts): + output_path: Optional[Path] = None + temp_output_path: Optional[Path] = None + try: + if state_store is not None: + state_store.mark( + burst_id, + 'in_progress', + attempts=attempt + 1, + extra={'burst_id': burst_id}, + ) - if 300 <= response.status_code < 400: - redirect_url = response.headers['Location'] - logger.debug(f'Following redirect to: {redirect_url}') - response = _post_with_auth_retry(redirect_url) + existing_record = state_store.get(burst_id) if state_store is not None else None + existing_output = existing_record.get('output_path') if isinstance(existing_record, dict) else None + existing_temp_output = ( + Path(existing_output).with_suffix(Path(existing_output).suffix + '.part') + if existing_output else None + ) + resume_from = 0 + if existing_temp_output is not None and existing_temp_output.exists(): + resume_from = existing_temp_output.stat().st_size - if response.status_code != 200: - err_msg = ( - response.json() - if response.headers.get('Content-Type') == 'application/json' - else response.text - ) - logger.error(f'❌ Burst processing failed with status {response.status_code}') - raise RuntimeError(f'Failed to process burst: \n{err_msg}') + response = _post_with_auth_retry( + f'https://catalogue.dataspace.copernicus.eu/odata/v1/Bursts({burst_id})/$value' + , + range_start=resume_from, + ) - logger.info('✅ Burst processing completed successfully') + if 300 <= response.status_code < 400: + redirect_url = response.headers['Location'] + logger.debug(f'Following redirect to: {redirect_url}') + response = _post_with_auth_retry(redirect_url, range_start=resume_from) - try: - zipfile_name = response.headers['Content-Disposition'].split('filename=')[1] - except (KeyError, IndexError): - zipfile_name = 'output_burst.zip' - logger.warning(f'⚠️ Could not extract filename from headers, using default: {zipfile_name}') + if resume_from > 0 and response.status_code != 206: + logger.warning('⚠️ Burst endpoint did not honor range request. Restarting from byte 0.') + resume_from = 0 + if existing_temp_output is not None and existing_temp_output.exists(): + existing_temp_output.unlink() + response = _post_with_auth_retry( + f'https://catalogue.dataspace.copernicus.eu/odata/v1/Bursts({burst_id})/$value' + ) + if 300 <= response.status_code < 400: + redirect_url = response.headers['Location'] + response = _post_with_auth_retry(redirect_url) - output_path = output_dir / zipfile_name - logger.info(f'💾 Downloading burst to: {output_path}') - - total_size = 0 - with open(output_path, 'wb') as target_file: - for chunk in response.iter_content(chunk_size=8192): - target_file.write(chunk) - total_size += len(chunk) - - size_mb = total_size / (1024 * 1024) - logger.info(f'✅ Successfully saved burst product ({size_mb:.2f} MB)') + if response.status_code not in (200, 206): + err_msg = ( + response.json() + if response.headers.get('Content-Type') == 'application/json' + else response.text + ) + logger.error(f'❌ Burst processing failed with status {response.status_code}') + raise RuntimeError(f'Failed to process burst: \n{err_msg}') + + logger.info('✅ Burst processing completed successfully') + + try: + zipfile_name = response.headers['Content-Disposition'].split('filename=')[1] + except (KeyError, IndexError): + zipfile_name = 'output_burst.zip' + logger.warning(f'⚠️ Could not extract filename from headers, using default: {zipfile_name}') + + output_path = output_dir / zipfile_name + temp_output_path = output_path.with_suffix(output_path.suffix + '.part') + logger.info(f'💾 Downloading burst to: {output_path}') + + total_size = resume_from + write_mode = 'ab' if resume_from > 0 else 'wb' + with open(temp_output_path, write_mode) as target_file: + for chunk in response.iter_content(chunk_size=8192): + if not chunk: + continue + target_file.write(chunk) + total_size += len(chunk) + + if total_size <= 0: + raise RuntimeError('Burst download produced an empty file') + + os.replace(temp_output_path, output_path) + size_mb = total_size / (1024 * 1024) + logger.info(f'✅ Successfully saved burst product ({size_mb:.2f} MB)') + + if state_store is not None: + state_store.mark( + burst_id, + 'success', + attempts=attempt + 1, + output_path=str(output_path), + extra={'size_bytes': total_size, 'partial_bytes': total_size}, + ) + return + except Exception as exc: + last_error = exc + if state_store is not None: + partial_bytes = None + if temp_output_path is not None and temp_output_path.exists(): + partial_bytes = temp_output_path.stat().st_size + state_store.mark( + burst_id, + 'failed', + attempts=attempt + 1, + error=str(exc), + output_path=str(output_path) if output_path is not None else None, + extra={'partial_bytes': partial_bytes} if partial_bytes is not None else None, + ) + + should_retry = attempt < attempts - 1 and not isinstance(exc, ValueError) + if should_retry: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + logger.warning( + f'⚠️ Burst download attempt {attempt + 1}/{attempts} failed ({exc}). ' + f'Retrying in {delay:.1f}s...' + ) + time.sleep(delay) + else: + raise + + if last_error is not None: + raise last_error def main() -> None: diff --git a/phidown/insar_workflow.py b/phidown/insar_workflow.py index 2bd10f2..5fba189 100644 --- a/phidown/insar_workflow.py +++ b/phidown/insar_workflow.py @@ -53,7 +53,15 @@ class BurstWorkflowConfig: def build_burst_workflow_config(config: Dict[str, Any]) -> BurstWorkflowConfig: + if not isinstance(config, dict): + raise TypeError("Workflow config must be a dictionary.") + search = config.get("search", {}) + if search is None: + search = {} + if not isinstance(search, dict): + raise TypeError("Workflow config 'search' section must be a dictionary.") + return BurstWorkflowConfig( search=BurstSearchConfig( aoi_wkt=search.get("aoi_wkt", ""), @@ -73,10 +81,13 @@ def build_burst_workflow_config(config: Dict[str, Any]) -> BurstWorkflowConfig: def _platform_filter(platforms: List[str]) -> Optional[str]: - if "ALL" in platforms: + if not platforms: return None - if len(platforms) == 1: - return platforms[0] + normalized = [str(platform).upper() for platform in platforms] + if "ALL" in normalized: + return None + if len(normalized) == 1: + return normalized[0] return None @@ -89,6 +100,8 @@ def find_orbit_configuration(cfg: BurstSearchConfig, searcher: Optional[Copernic product_type="SLC", top=cfg.max_results, ) + if not isinstance(analysis, dict): + analysis = {} rec = analysis.get("recommended") or {} return { "analysis": analysis, @@ -144,6 +157,8 @@ def search_bursts(cfg: BurstSearchConfig, searcher: Optional[CopernicusDataSearc def compute_burst_statistics(df: pd.DataFrame, searcher: Optional[CopernicusDataSearcher] = None) -> Dict[str, Any]: + if df is None or df.empty: + return {} local_searcher = searcher or CopernicusDataSearcher() return local_searcher.compute_temporal_statistics(df) @@ -166,7 +181,7 @@ def validate_burst_results(df: pd.DataFrame, stats: Dict[str, Any]) -> Dict[str, if "coverage" in df.columns and df["coverage"].notna().sum() == 0: warnings.append("Coverage column exists but contains only null values.") - if not stats: + if not isinstance(stats, dict) or not stats: warnings.append("Temporal statistics are empty.") elif "total_acquisitions" not in stats: errors.append("Temporal statistics missing total_acquisitions.") @@ -207,10 +222,11 @@ def save_workflow_outputs( out = Path(output_dir) out.mkdir(parents=True, exist_ok=True) paths: Dict[str, Path] = {} + export_df = df if df is not None else pd.DataFrame() if save_results_csv: csv_path = out / "search_results.csv" - df.to_csv(csv_path, index=False) + export_df.to_csv(csv_path, index=False) paths["search_results_csv"] = csv_path stats_path = out / "temporal_statistics.json" @@ -225,7 +241,7 @@ def save_workflow_outputs( debug_path.write_text(json.dumps(debug, indent=2, default=str)) paths["debug_summary_json"] = debug_path - coverage_plot_path = _save_coverage_plot(df, out, orbit=orbit) + coverage_plot_path = _save_coverage_plot(export_df, out, orbit=orbit) if coverage_plot_path is not None: paths["coverage_plot_png"] = coverage_plot_path diff --git a/phidown/interactive_tools.py b/phidown/interactive_tools.py index 9a158b3..9a87457 100755 --- a/phidown/interactive_tools.py +++ b/phidown/interactive_tools.py @@ -625,7 +625,7 @@ def search_with_polygon(polygon_tool: InteractivePolygonTool, try: # Configure search searcher = CopernicusDataSearcher() - searcher._query_by_filter( + searcher.query_by_filter( collection_name=collection_name, product_type=product_type, orbit_direction=None, diff --git a/phidown/native_download.py b/phidown/native_download.py new file mode 100644 index 0000000..b670f69 --- /dev/null +++ b/phidown/native_download.py @@ -0,0 +1,451 @@ +"""Native resumable download helpers for S3-backed product transfers.""" + +from __future__ import annotations + +import configparser +import importlib +import logging +import os +from dataclasses import dataclass +from typing import Any, Dict, Iterable, List, Optional, Tuple + +from tqdm import tqdm + +from .download_state import DownloadStateStore, default_state_file +from .s5cmd_utils import ensure_s5cmd_config + +logger = logging.getLogger(__name__) + + +@dataclass +class S3ObjectMeta: + bucket: str + key: str + size: int + etag: Optional[str] + + +@dataclass +class NativeDownloadResult: + status: str + output_path: str + object_count: int + bytes_transferred: int + + +def _import_boto3_modules(): + """Import boto3/botocore lazily so plain module import stays lightweight.""" + boto3 = importlib.import_module("boto3") + botocore_config = importlib.import_module("botocore.config") + return boto3, botocore_config.Config + + +def _parse_bool(value: str, default: bool = True) -> bool: + text = str(value).strip("'\"").lower() + if text in {"1", "true", "yes", "on"}: + return True + if text in {"0", "false", "no", "off"}: + return False + return default + + +def _read_s3_config(config_file: str) -> Dict[str, Any]: + config = configparser.ConfigParser() + if not os.path.exists(config_file): + raise FileNotFoundError(f"Configuration file {config_file} not found") + config.read(config_file) + if "default" not in config: + raise ValueError(f"Configuration file {config_file} is missing a [default] section") + + default = config["default"] + host_base = default.get("host_base", "eodata.dataspace.copernicus.eu").strip("'\"") + use_https = _parse_bool(default.get("use_https", "true")) + endpoint_url = f"{'https' if use_https else 'http'}://{host_base}" + return { + "aws_access_key_id": default.get("aws_access_key_id", "").strip("'\""), + "aws_secret_access_key": default.get("aws_secret_access_key", "").strip("'\""), + "region_name": default.get("aws_region", "us-east-1").strip("'\""), + "endpoint_url": endpoint_url, + } + + +def _build_s3_client( + config_file: str, + *, + connect_timeout: float, + read_timeout: Optional[float], +): + boto3, Config = _import_boto3_modules() + cfg = _read_s3_config(config_file) + timeout_value = float(connect_timeout) if read_timeout is None else float(read_timeout) + return boto3.client( + "s3", + aws_access_key_id=cfg["aws_access_key_id"], + aws_secret_access_key=cfg["aws_secret_access_key"], + region_name=cfg["region_name"], + endpoint_url=cfg["endpoint_url"], + config=Config( + signature_version="s3v4", + connect_timeout=float(connect_timeout), + read_timeout=timeout_value, + retries={"max_attempts": 0}, + s3={"addressing_style": "path"}, + ), + ) + + +def _parse_cdse_s3_path(s3_path: str) -> Tuple[str, str]: + if not s3_path.startswith("/eodata/"): + raise ValueError(f"S3 path must start with /eodata/, got: {s3_path}") + trimmed = s3_path.lstrip("/") + bucket, _, key = trimmed.partition("/") + if not bucket or not key: + raise ValueError(f"Invalid CDSE S3 path: {s3_path}") + return bucket, key.rstrip("/") + + +def _ensure_parent(path: str) -> None: + os.makedirs(os.path.dirname(path), exist_ok=True) + + +def _normalize_etag(value: Optional[str]) -> Optional[str]: + if not value: + return None + return str(value).strip('"') + + +def _object_state_map(record: Dict[str, Any]) -> Dict[str, Dict[str, Any]]: + raw = record.get("objects") + return raw if isinstance(raw, dict) else {} + + +def _build_record( + *, + existing: Optional[Dict[str, Any]], + status: str, + source_path: str, + output_path: str, + download_all: bool, + object_states: Dict[str, Dict[str, Any]], + attempts: Optional[int] = None, + error: Optional[str] = None, +) -> Dict[str, Any]: + prior = existing or {} + record: Dict[str, Any] = { + "status": status, + "source_path": source_path, + "output_path": output_path, + "download_all": download_all, + "objects": object_states, + } + if attempts is not None: + record["attempts"] = attempts + elif "attempts" in prior: + record["attempts"] = prior["attempts"] + if error is not None: + record["error"] = error + elif status != "success" and "error" in prior: + record["error"] = prior["error"] + completed = sum(1 for obj in object_states.values() if obj.get("status") == "success") + record["completed_objects"] = completed + record["object_count"] = len(object_states) + record["bytes_transferred"] = sum(int(obj.get("completed_bytes", 0)) for obj in object_states.values()) + return record + + +def _list_objects(client, bucket: str, key: str, download_all: bool) -> List[S3ObjectMeta]: + if download_all: + prefix = key if key.endswith("/") else f"{key}/" + paginator = client.get_paginator("list_objects_v2") + objects: List[S3ObjectMeta] = [] + for page in paginator.paginate(Bucket=bucket, Prefix=prefix): + for item in page.get("Contents", []): + objects.append( + S3ObjectMeta( + bucket=bucket, + key=item["Key"], + size=int(item["Size"]), + etag=_normalize_etag(item.get("ETag")), + ) + ) + if not objects: + raise FileNotFoundError(f"No objects found under {bucket}/{prefix}") + return objects + + head = client.head_object(Bucket=bucket, Key=key) + return [ + S3ObjectMeta( + bucket=bucket, + key=key, + size=int(head["ContentLength"]), + etag=_normalize_etag(head.get("ETag")), + ) + ] + + +def _download_root(output_dir: str, key: str, download_all: bool) -> str: + if download_all: + return os.path.join(output_dir, os.path.basename(key.rstrip("/"))) + return os.path.join(output_dir, os.path.basename(key.rstrip("/"))) + + +def _object_output_path(root_output_path: str, key: str, prefix: str, download_all: bool) -> str: + if download_all: + relative = key[len(prefix):].lstrip("/") + return os.path.join(root_output_path, relative) + return root_output_path + + +def _existing_object_progress( + final_path: str, + temp_path: str, + meta: S3ObjectMeta, + object_state: Optional[Dict[str, Any]], + download_all: bool, +) -> Tuple[str, int]: + recorded_etag = _normalize_etag(object_state.get("etag")) if object_state else None + if object_state and recorded_etag and meta.etag and recorded_etag != meta.etag: + if os.path.exists(temp_path): + os.remove(temp_path) + if os.path.isfile(final_path): + os.remove(final_path) + + if os.path.isfile(final_path): + final_size = os.path.getsize(final_path) + trust_existing_final = download_all or object_state is not None + if trust_existing_final and final_size == meta.size: + return "success", meta.size + if trust_existing_final: + os.remove(final_path) + + if os.path.isfile(temp_path): + partial_size = os.path.getsize(temp_path) + if partial_size > meta.size: + os.remove(temp_path) + return "pending", 0 + if partial_size == meta.size: + os.replace(temp_path, final_path) + return "success", meta.size + return "partial", partial_size + + return "pending", 0 + + +def _stream_body_to_file(body, path: str, mode: str, progress: Optional[tqdm]) -> int: + written = 0 + with open(path, mode) as handle: + for chunk in body.iter_chunks(chunk_size=1024 * 1024): + if not chunk: + continue + handle.write(chunk) + written += len(chunk) + if progress is not None: + progress.update(len(chunk)) + return written + + +def download_s3_resumable( + *, + s3_path: str, + output_dir: str, + config_file: str, + download_all: bool = True, + state_file: Optional[str] = None, + state_item_id: Optional[str] = None, + connect_timeout: float = 30.0, + read_timeout: Optional[float] = None, + show_progress: bool = True, + attempts: int = 1, + persist_state: bool = True, + reset_config: bool = False, +) -> NativeDownloadResult: + """Download a product/object using native ranged S3 reads.""" + abs_output_dir = os.path.abspath(output_dir) + os.makedirs(abs_output_dir, exist_ok=True) + + bucket, key = _parse_cdse_s3_path(s3_path) + root_output_path = _download_root(abs_output_dir, key, download_all) + item_id = state_item_id or f"s3:{s3_path}" + + ensure_s5cmd_config(config_file, reset=reset_config) + + client = _build_s3_client( + config_file, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + ) + objects = _list_objects(client, bucket, key, download_all) + prefix = key if key.endswith("/") else f"{key}/" + + state_store = None + existing: Dict[str, Any] = {} + if persist_state: + resolved_state_file = state_file or default_state_file(abs_output_dir) + state_store = DownloadStateStore(resolved_state_file) + existing = state_store.get(item_id) or {} + object_states = _object_state_map(existing) + + initial_bytes = 0 + for meta in objects: + final_path = _object_output_path(root_output_path, meta.key, prefix, download_all) + temp_path = f"{final_path}.part" + status, completed_bytes = _existing_object_progress( + final_path, + temp_path, + meta, + object_states.get(meta.key), + download_all, + ) + object_states[meta.key] = { + "status": status, + "output_path": final_path, + "temp_path": temp_path, + "etag": meta.etag, + "size": meta.size, + "completed_bytes": completed_bytes, + } + initial_bytes += completed_bytes + + if all(state.get("status") == "success" for state in object_states.values()): + record = _build_record( + existing=existing, + status="success", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + ) + if state_store is not None: + state_store.set(item_id, record) + return NativeDownloadResult( + status="skipped", + output_path=root_output_path, + object_count=len(objects), + bytes_transferred=0, + ) + + record = _build_record( + existing=existing, + status="in_progress", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + attempts=attempts, + ) + if state_store is not None: + state_store.set(item_id, record) + + total_size = sum(meta.size for meta in objects) + progress = None + bytes_written = 0 + if show_progress and total_size > 0: + progress = tqdm( + total=total_size, + initial=initial_bytes, + unit="B", + unit_scale=True, + unit_divisor=1024, + desc="Downloading", + ) + + try: + for meta in objects: + state = object_states[meta.key] + if state["status"] == "success": + continue + + final_path = state["output_path"] + temp_path = state["temp_path"] + completed_bytes = int(state.get("completed_bytes", 0)) + _ensure_parent(final_path) + + if completed_bytes < 0 or completed_bytes > meta.size: + completed_bytes = 0 + if os.path.exists(temp_path): + os.remove(temp_path) + + request_kwargs = {"Bucket": meta.bucket, "Key": meta.key} + mode = "wb" + if completed_bytes > 0: + request_kwargs["Range"] = f"bytes={completed_bytes}-" + mode = "ab" + + response = client.get_object(**request_kwargs) + status_code = response.get("ResponseMetadata", {}).get("HTTPStatusCode") + if completed_bytes > 0 and status_code != 206: + completed_bytes = 0 + mode = "wb" + if os.path.exists(temp_path): + os.remove(temp_path) + response = client.get_object(Bucket=meta.bucket, Key=meta.key) + + chunk_bytes = _stream_body_to_file(response["Body"], temp_path, mode, progress) + bytes_written += chunk_bytes + final_size = os.path.getsize(temp_path) + if final_size != meta.size: + state["completed_bytes"] = final_size + state["status"] = "partial" + record = _build_record( + existing=record, + status="failed", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + attempts=attempts, + error=f"Incomplete object download for {meta.key}: {final_size}/{meta.size} bytes", + ) + if state_store is not None: + state_store.set(item_id, record) + raise RuntimeError(record["error"]) + + os.replace(temp_path, final_path) + state["completed_bytes"] = meta.size + state["status"] = "success" + record = _build_record( + existing=record, + status="in_progress", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + attempts=attempts, + ) + if state_store is not None: + state_store.set(item_id, record) + + record = _build_record( + existing=record, + status="success", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + attempts=attempts, + ) + if state_store is not None: + state_store.set(item_id, record) + return NativeDownloadResult( + status="downloaded", + output_path=root_output_path, + object_count=len(objects), + bytes_transferred=bytes_written, + ) + except Exception as exc: + record = _build_record( + existing=record, + status="failed", + source_path=s3_path, + output_path=root_output_path, + download_all=download_all, + object_states=object_states, + attempts=attempts, + error=str(exc), + ) + if state_store is not None: + state_store.set(item_id, record) + raise + finally: + if progress is not None: + progress.close() diff --git a/phidown/s5cmd_utils.py b/phidown/s5cmd_utils.py index 95128f4..10597cb 100644 --- a/phidown/s5cmd_utils.py +++ b/phidown/s5cmd_utils.py @@ -6,6 +6,7 @@ import shlex import time import threading +import random from tqdm import tqdm # Configure logging @@ -37,6 +38,9 @@ def run_s5cmd_with_config( config_file: str = '.s5cfg', endpoint_url: Optional[str] = None, verbose: bool = False, + s5cmd_retry_count: Optional[int] = None, + max_workers: Optional[int] = None, + log_tail_lines: int = 40, ) -> str: """Run s5cmd command with configuration file. @@ -51,6 +55,9 @@ def run_s5cmd_with_config( config_file: Path to s5cmd configuration file (default: '.s5cfg') endpoint_url: Optional endpoint URL override verbose: Whether to print command being executed + s5cmd_retry_count: Optional s5cmd internal retry count (global flag). + max_workers: Optional s5cmd worker count (global flag). + log_tail_lines: Number of trailing output lines to keep in error context. Returns: str: Command output as string @@ -89,6 +96,11 @@ def run_s5cmd_with_config( # Build command cmd_parts = ['s5cmd'] + if s5cmd_retry_count is not None: + cmd_parts.extend(['--retry-count', str(int(s5cmd_retry_count))]) + if max_workers is not None: + cmd_parts.extend(['--numworkers', str(int(max_workers))]) + # Add endpoint URL if endpoint_url: cmd_parts.extend(['--endpoint-url', endpoint_url]) @@ -109,7 +121,7 @@ def run_s5cmd_with_config( cmd_parts, stdout=subprocess.PIPE, stderr=subprocess.STDOUT, - text=True, + text=False, env=env ) @@ -117,22 +129,42 @@ def run_s5cmd_with_config( try: if process.stdout is None: raise RuntimeError('Failed to capture process stdout') - for line in iter(process.stdout.readline, ''): - # strip trailing newlines but preserve message - text_line = line.rstrip('\n') - if text_line: - if verbose: - logger.info(text_line) - stdout_lines.append(text_line) + + pending_text = '' + stream = process.stdout + while True: + if hasattr(stream, 'read1'): + chunk = stream.read1(4096) + else: + chunk = stream.read(4096) + if not chunk: + break + + text_chunk = chunk.decode('utf-8', errors='replace') + pending_text += text_chunk.replace('\r', '\n') + split_lines = pending_text.split('\n') + pending_text = split_lines.pop() + for line in split_lines: + text_line = line.strip() + if text_line: + if verbose: + logger.info(text_line) + stdout_lines.append(text_line) + + if pending_text.strip(): + final_line = pending_text.strip() + if verbose: + logger.info(final_line) + stdout_lines.append(final_line) returncode = process.wait() if returncode != 0: # Join collected output for better error context - combined = "\n".join(stdout_lines) + combined = "\n".join(stdout_lines[-log_tail_lines:]) if verbose: logger.error(f'Command exited with non-zero status {returncode}. ' f'Output:\n{combined}') - raise subprocess.CalledProcessError(returncode, cmd_parts, output=combined) + raise subprocess.CalledProcessError(returncode, cmd_parts, output=combined, stderr=combined) return "\n".join(stdout_lines) except Exception: @@ -144,6 +176,36 @@ def run_s5cmd_with_config( raise +def _compute_backoff_delay(attempt_index: int, backoff_base: float, backoff_max: float) -> float: + """Compute retry delay with exponential backoff and jitter.""" + exponential = backoff_base * (2 ** attempt_index) + return min(backoff_max, exponential) + random.uniform(0.0, 0.5) + + +def ensure_s5cmd_config(config_file: str, reset: bool = False) -> None: + """Ensure the s5cmd credential file exists, optionally recreating it.""" + if os.path.exists(config_file) and not reset: + return + + access_key = input('Enter Access Key ID: ').strip() + secret_key = input('Enter Secret Access Key: ').strip() + + config_content = f"""[default] + aws_access_key_id = {access_key} + aws_secret_access_key = {secret_key} + aws_region = eu-central-1 + host_base = eodata.dataspace.copernicus.eu + host_bucket = eodata.dataspace.copernicus.eu + use_https = true + check_ssl_certificate = true + """ + + with open(config_file, 'w') as f: + f.write(config_content) + + logger.info(f'Created configuration file: {config_file}') + + def get_directory_size(directory: str) -> int: """Calculate total size of all files in a directory recursively. @@ -173,7 +235,12 @@ def pull_down( download_all: bool = True, reset: bool = False, total_size: Optional[int] = None, - show_progress: bool = True + show_progress: bool = True, + retry_count: int = 1, + s5cmd_retry_count: Optional[int] = None, + max_workers: Optional[int] = None, + backoff_base: float = 2.0, + backoff_max: float = 60.0, ) -> bool: """Download Sentinel-1 SAFE directory from Copernicus Data Space. @@ -190,6 +257,11 @@ def pull_down( reset: If True, prompts for new AWS credentials and resets config file total_size: Expected total size in bytes (for progress bar) show_progress: If True and total_size provided, shows tqdm progress bar + retry_count: Number of command-level retries on failure. + s5cmd_retry_count: Optional s5cmd internal retry count. + max_workers: Optional s5cmd worker count. + backoff_base: Base delay in seconds for exponential backoff. + backoff_max: Max delay in seconds for exponential backoff. Returns: bool: True if download was successful @@ -223,26 +295,7 @@ def pull_down( raise ValueError('Output directory arg cannot be empty') if not os.path.isabs(output_dir): raise ValueError('Output directory must be an absolute path') - # validate config file: - # try to create one config file if it does not exist - if not os.path.exists(config_file) or reset: - access_key = input('Enter Access Key ID: ').strip() - secret_key = input('Enter Secret Access Key: ').strip() - - config_content = f"""[default] - aws_access_key_id = {access_key} - aws_secret_access_key = {secret_key} - aws_region = eu-central-1 - host_base = eodata.dataspace.copernicus.eu - host_bucket = eodata.dataspace.copernicus.eu - use_https = true - check_ssl_certificate = true - """ - - with open(config_file, 'w') as f: - f.write(config_content) - - logger.info(f'Created configuration file: {config_file}') + ensure_s5cmd_config(config_file, reset=reset) if not os.path.exists(config_file): raise FileNotFoundError(f'Configuration file {config_file} still not found.') @@ -270,65 +323,97 @@ def pull_down( else: logger.info(f'Downloading from: {s3_url}') logger.info(f'Output directory: {full_output_dir}') - - # If progress bar is enabled and total_size is provided - if show_progress and total_size and total_size > 0: - # Get initial size - initial_size = get_directory_size(full_output_dir) - - # Create progress bar - pbar = tqdm( - total=total_size, - initial=initial_size, - unit='B', - unit_scale=True, - unit_divisor=1024, - desc='Downloading' - ) - - # Flag to stop monitoring thread - stop_monitoring = threading.Event() - - def monitor_progress(): - """Monitor download progress by checking disk usage.""" - last_size = initial_size - while not stop_monitoring.is_set(): - time.sleep(0.5) # Update every 0.5 seconds - current_size = get_directory_size(full_output_dir) - delta = current_size - last_size - if delta > 0: - pbar.update(delta) - last_size = current_size - - # Start monitoring thread - monitor_thread = threading.Thread(target=monitor_progress, daemon=True) - monitor_thread.start() - - try: + + def _run_single_download() -> None: + # If progress bar is enabled and total_size is provided + if show_progress and total_size and total_size > 0: + # Get initial size + initial_size = get_directory_size(full_output_dir) + + # Create progress bar + pbar = tqdm( + total=total_size, + initial=initial_size, + unit='B', + unit_scale=True, + unit_divisor=1024, + desc='Downloading' + ) + + # Flag to stop monitoring thread + stop_monitoring = threading.Event() + + def monitor_progress(): + """Monitor download progress by checking disk usage.""" + last_size = initial_size + while not stop_monitoring.is_set(): + time.sleep(0.5) # Update every 0.5 seconds + current_size = get_directory_size(full_output_dir) + delta = current_size - last_size + if delta > 0: + pbar.update(delta) + last_size = current_size + + # Start monitoring thread + monitor_thread = threading.Thread(target=monitor_progress, daemon=True) + monitor_thread.start() + + try: + run_s5cmd_with_config( + command=command, + config_file=config_file, + endpoint_url=endpoint_url, + verbose=False, # Reduce logging noise when using progress bar + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, + ) + finally: + # Stop monitoring and ensure final update + stop_monitoring.set() + monitor_thread.join(timeout=2) + + # Final size check + final_size = get_directory_size(full_output_dir) + remaining = final_size - pbar.n + if remaining > 0: + pbar.update(remaining) + + pbar.close() + else: + # No progress bar - use original implementation run_s5cmd_with_config( command=command, config_file=config_file, endpoint_url=endpoint_url, - verbose=False # Reduce logging noise when using progress bar + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, ) - finally: - # Stop monitoring and ensure final update - stop_monitoring.set() - monitor_thread.join(timeout=2) - - # Final size check - final_size = get_directory_size(full_output_dir) - remaining = final_size - pbar.n - if remaining > 0: - pbar.update(remaining) - - pbar.close() - else: - # No progress bar - use original implementation - run_s5cmd_with_config( - command=command, - config_file=config_file, - endpoint_url=endpoint_url - ) + + attempts = max(1, int(retry_count)) + last_exception: Optional[Exception] = None + for attempt in range(attempts): + try: + _run_single_download() + return True + except Exception as exc: + last_exception = exc + if attempt < attempts - 1: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + logger.warning( + f'Download attempt {attempt + 1}/{attempts} failed ({exc}). ' + f'Retrying in {delay:.1f}s...' + ) + time.sleep(delay) + + if isinstance(last_exception, subprocess.CalledProcessError): + tail = (last_exception.output or '').strip() + if tail: + raise RuntimeError(f's5cmd failed after {attempts} attempts. Last output:\n{tail}') from last_exception + if last_exception is not None: + raise last_exception return True + + +# Backward-compatible alias used by older docs and notebooks. +download = pull_down diff --git a/phidown/search.py b/phidown/search.py index 1a338be..374bc42 100755 --- a/phidown/search.py +++ b/phidown/search.py @@ -10,8 +10,14 @@ from pathlib import Path import copy import asyncio +import time +import random +import re +import warnings from .downloader import pull_down, get_token, download_burst_on_demand, TokenManager +from .download_state import DownloadStateStore, default_state_file, is_non_empty_file, is_product_complete +from .native_download import download_s3_resumable # Optional shapely import for AOI coverage calculation try: @@ -33,6 +39,247 @@ # Configure logging logger = logging.getLogger(__name__) REQUEST_TIMEOUT_SECONDS = 30 +_SUPPORTED_AOI_WKT_TYPES = ( + "POINT", + "MULTIPOINT", + "LINESTRING", + "MULTILINESTRING", + "POLYGON", + "MULTIPOLYGON", +) +_WKT_NUMBER_PATTERN = r"[+-]?(?:\d+(?:\.\d*)?|\.\d+)(?:[eE][+-]?\d+)?" +_WKT_COORDINATE_RE = re.compile( + rf"^\s*{_WKT_NUMBER_PATTERN}\s+{_WKT_NUMBER_PATTERN}\s*$" +) + + +def _compute_backoff_delay(attempt_index: int, backoff_base: float, backoff_max: float) -> float: + """Compute retry delay with exponential backoff and jitter.""" + exponential = backoff_base * (2 ** attempt_index) + return min(backoff_max, exponential) + random.uniform(0.0, 0.5) + + +def _resolve_product_download_mode(mode: str = 'fast', *, resume_mode: typing.Optional[str] = None) -> str: + if mode not in {'fast', 'safe'}: + raise ValueError("mode must be either 'fast' or 'safe'") + if resume_mode is None: + return mode + if resume_mode not in {'off', 'product'}: + raise ValueError("resume_mode must be either 'off' or 'product'") + warnings.warn( + 'resume_mode is deprecated; use mode="fast" or mode="safe" instead.', + DeprecationWarning, + stacklevel=3, + ) + return 'safe' if resume_mode == 'product' else 'fast' + + +def _split_wkt_components(text: str) -> typing.List[str]: + """Split comma-separated WKT components while respecting nested parentheses.""" + parts: typing.List[str] = [] + depth = 0 + start = 0 + + for index, char in enumerate(text): + if char == "(": + depth += 1 + elif char == ")": + depth -= 1 + if depth < 0: + raise ValueError("unbalanced parentheses") + elif char == "," and depth == 0: + part = text[start:index].strip() + if not part: + raise ValueError("empty geometry component") + parts.append(part) + start = index + 1 + + if depth != 0: + raise ValueError("unbalanced parentheses") + + tail = text[start:].strip() + if not tail: + raise ValueError("empty geometry component") + parts.append(tail) + return parts + + +def _parse_wkt_geometry(aoi_wkt: str) -> typing.Tuple[str, str]: + """Return the normalized WKT geometry type and body.""" + normalized_wkt = " ".join(aoi_wkt.split()) + match = re.match(r"([A-Za-z]+)", normalized_wkt) + if match is None: + raise ValueError("missing geometry type") + + geometry_type = match.group(1).upper() + body = normalized_wkt[match.end():].strip() + if not body: + raise ValueError("missing geometry body") + return geometry_type, body + + +def _unwrap_wkt_group(text: str) -> str: + """Return the contents of a single balanced parenthesized WKT group.""" + stripped = text.strip() + if not stripped.startswith("(") or not stripped.endswith(")"): + raise ValueError("missing outer parentheses") + + depth = 0 + for index, char in enumerate(stripped): + if char == "(": + depth += 1 + elif char == ")": + depth -= 1 + if depth < 0: + raise ValueError("unbalanced parentheses") + if depth == 0 and index != len(stripped) - 1: + raise ValueError("unexpected trailing geometry text") + + if depth != 0: + raise ValueError("unbalanced parentheses") + + inner = stripped[1:-1].strip() + if not inner: + raise ValueError("empty geometry body") + return inner + + +def _parse_coordinate(text: str) -> typing.Tuple[float, float]: + """Parse and validate a 2D WKT coordinate pair.""" + if not _WKT_COORDINATE_RE.fullmatch(text): + raise ValueError(f"invalid coordinate pair: {text!r}") + lon_text, lat_text = text.split() + return float(lon_text), float(lat_text) + + +def _validate_coordinate(text: str) -> None: + """Validate a 2D WKT coordinate pair.""" + _parse_coordinate(text) + + +def _coordinates_from_sequence(text: str) -> typing.List[typing.Tuple[float, float]]: + """Parse a comma-separated sequence of coordinate pairs.""" + return [_parse_coordinate(component) for component in _split_wkt_components(text)] + + +def _validate_coordinate_sequence(text: str) -> None: + """Validate a comma-separated sequence of 2D WKT coordinate pairs.""" + _coordinates_from_sequence(text) + + +def _validate_point_body(body: str) -> None: + _validate_coordinate(_unwrap_wkt_group(body)) + + +def _validate_linestring_body(body: str) -> None: + _validate_coordinate_sequence(_unwrap_wkt_group(body)) + + +def _validate_multipoint_body(body: str) -> None: + for component in _split_wkt_components(_unwrap_wkt_group(body)): + if component.startswith("("): + _validate_coordinate(_unwrap_wkt_group(component)) + else: + _validate_coordinate(component) + + +def _validate_multilinestring_body(body: str) -> None: + for component in _split_wkt_components(_unwrap_wkt_group(body)): + _validate_coordinate_sequence(_unwrap_wkt_group(component)) + + +def _validate_polygon_ring(ring: str) -> None: + coords = _coordinates_from_sequence(_unwrap_wkt_group(ring)) + if len(coords) < 4: + raise ValueError("WKT polygon ring must have at least 4 coordinate pairs") + if coords[0] != coords[-1]: + raise ValueError("WKT polygon ring must start and end with the same point") + + +def _validate_polygon_body(body: str) -> None: + for ring in _split_wkt_components(_unwrap_wkt_group(body)): + _validate_polygon_ring(ring) + + +def _validate_multipolygon_body(body: str) -> None: + for polygon in _split_wkt_components(_unwrap_wkt_group(body)): + _validate_polygon_body(polygon) + + +def _validate_supported_aoi_wkt(aoi_wkt: str) -> None: + """Validate AOI WKT syntax for the supported CDSE geometry allowlist.""" + geometry_type, body = _parse_wkt_geometry(aoi_wkt) + if geometry_type not in _SUPPORTED_AOI_WKT_TYPES: + supported = ", ".join(_SUPPORTED_AOI_WKT_TYPES) + raise ValueError( + f"Unsupported AOI WKT geometry type '{geometry_type}'. Supported types: {supported}" + ) + if body.upper() == "EMPTY": + return + + validators = { + "POINT": _validate_point_body, + "MULTIPOINT": _validate_multipoint_body, + "LINESTRING": _validate_linestring_body, + "MULTILINESTRING": _validate_multilinestring_body, + "POLYGON": _validate_polygon_body, + "MULTIPOLYGON": _validate_multipolygon_body, + } + validators[geometry_type](body) + + +def _strip_closing_coordinate( + coords: typing.List[typing.Tuple[float, float]] +) -> typing.List[typing.Tuple[float, float]]: + if len(coords) > 1 and coords[0] == coords[-1]: + return coords[:-1] + return coords + + +def _centroid_coordinates_from_body( + geometry_type: str, + body: str, +) -> typing.List[typing.Tuple[float, float]]: + if body.upper() == "EMPTY": + raise ValueError("AOI WKT geometry cannot be EMPTY") + + if geometry_type == "POINT": + return [_parse_coordinate(_unwrap_wkt_group(body))] + + if geometry_type == "MULTIPOINT": + coords: typing.List[typing.Tuple[float, float]] = [] + for component in _split_wkt_components(_unwrap_wkt_group(body)): + if component.startswith("("): + coords.append(_parse_coordinate(_unwrap_wkt_group(component))) + else: + coords.append(_parse_coordinate(component)) + return coords + + if geometry_type == "LINESTRING": + return _coordinates_from_sequence(_unwrap_wkt_group(body)) + + if geometry_type == "MULTILINESTRING": + coords = [] + for component in _split_wkt_components(_unwrap_wkt_group(body)): + coords.extend(_coordinates_from_sequence(_unwrap_wkt_group(component))) + return coords + + if geometry_type == "POLYGON": + rings = _split_wkt_components(_unwrap_wkt_group(body)) + return _strip_closing_coordinate(_coordinates_from_sequence(_unwrap_wkt_group(rings[0]))) + + if geometry_type == "MULTIPOLYGON": + coords = [] + for polygon in _split_wkt_components(_unwrap_wkt_group(body)): + rings = _split_wkt_components(_unwrap_wkt_group(polygon)) + coords.extend( + _strip_closing_coordinate( + _coordinates_from_sequence(_unwrap_wkt_group(rings[0])) + ) + ) + return coords + + raise ValueError(f"Unsupported AOI WKT geometry type '{geometry_type}'") # Set up S3 credentials in .s5cfg file! @@ -114,6 +361,7 @@ def __init__( # Set default values for top and order_by self.top: int = 1000 self.count: bool = False + self.skip: typing.Optional[int] = None self.order_by: str = "ContentDate/Start desc" # Initialize placeholders for query results @@ -131,11 +379,12 @@ def query_by_filter( orbit_direction: typing.Optional[str] = None, cloud_cover_threshold: typing.Optional[float] = None, attributes: typing.Optional[typing.Dict[str, typing.Union[str, int, float]]] = None, - aoi_wkt: typing.Optional[str] = None, # Disclaimers: Polygon must start and end with the same point. Coordinates must be given in EPSG 4326 + aoi_wkt: typing.Optional[str] = None, # Coordinates should be expressed as WKT in EPSG:4326 for CDSE spatial filters. start_date: typing.Optional[str] = None, end_date: typing.Optional[str] = None, top: int = 1000, - count: bool = False, + count: bool = False, + skip: typing.Optional[int] = None, order_by: str = "ContentDate/Start desc", # Burst mode parameters burst_mode: bool = False, @@ -161,10 +410,14 @@ def query_by_filter( orbit_direction (str, optional): Orbit direction to filter (e.g., 'ASCENDING', 'DESCENDING'). Defaults to None. cloud_cover_threshold (float, optional): Maximum cloud cover percentage to filter. Defaults to None. attributes (typing.Dict[str, typing.Union[str, int, float]], optional): Additional attributes for filtering. Defaults to None. - aoi_wkt (str, optional): Area of Interest in WKT format. Defaults to None. + aoi_wkt (str, optional): Area of Interest in WKT format. Supported types are + POINT, MULTIPOINT, LINESTRING, MULTILINESTRING, POLYGON, and MULTIPOLYGON. + The query builder serializes the AOI as SRID 4326 for CDSE. Defaults to None. start_date (str, optional): Start date for filtering (ISO 8601 format). Defaults to None. end_date (str, optional): End date for filtering (ISO 8601 format). Defaults to None. top (int, optional): Maximum number of results to retrieve. Defaults to 1000. + count (bool, optional): Request result count and auto-fetch all pages when needed. Defaults to False. + skip (int, optional): Number of matching results to skip for manual pagination. Defaults to None. order_by (str, optional): Field and direction to order results by. Defaults to "ContentDate/Start desc". burst_mode (bool, optional): Enable Sentinel-1 SLC Burst mode searching. Defaults to False. burst_id (int, optional): Burst ID to filter (burst mode only). Defaults to None. @@ -189,6 +442,10 @@ def query_by_filter( self.base_url = base_url self.count = count # Set or override count option + self.skip = skip + self._validate_skip() + if self.count and self.skip is not None: + raise ValueError("The 'count' and 'skip' parameters cannot be used together.") # Assign and validate parameters self.collection_name = collection_name @@ -357,6 +614,21 @@ def _validate_top(self): if not (1 <= self.top <= 1000): raise ValueError("The 'top' parameter must be between 1 and 1000") + def _validate_skip(self): + """ + Validate the 'skip' parameter to ensure it is a non-negative integer. + + Raises: + TypeError: If the 'skip' parameter is not an integer. + ValueError: If the 'skip' parameter is negative. + """ + if self.skip is None: + return + if isinstance(self.skip, bool) or not isinstance(self.skip, int): + raise TypeError("The 'skip' parameter must be an integer") + if self.skip < 0: + raise ValueError("The 'skip' parameter must be greater than or equal to 0") + def _validate_cloud_cover_threshold(self): """ Validate the 'cloud_cover_threshold' parameter to ensure it is between 0 and 100. @@ -382,74 +654,26 @@ def _validate_orbit_direction(self): def _validate_aoi_wkt(self) -> None: """ - Validate and normalize the 'aoi_wkt' parameter to ensure it is a valid WKT polygon. - Automatically fixes common issues like extra whitespace and missing closing coordinates. + Validate and normalize the 'aoi_wkt' parameter as supported WKT geometry. Raises: - ValueError: If the 'aoi_wkt' parameter is not a valid WKT polygon. + ValueError: If the 'aoi_wkt' parameter is malformed WKT or uses an unsupported geometry type. TypeError: If the 'aoi_wkt' parameter is not a string. """ if self.aoi_wkt is not None: if not isinstance(self.aoi_wkt, str): raise TypeError("The 'aoi_wkt' parameter must be a string") - - original_wkt = self.aoi_wkt - - # First normalize all whitespace + self.aoi_wkt = ' '.join(self.aoi_wkt.split()) - + if not self.aoi_wkt.strip(): raise ValueError("The 'aoi_wkt' parameter cannot be empty") - - # Check if it starts with POLYGON (case insensitive) and has proper structure - upper_wkt = self.aoi_wkt.upper() - if not upper_wkt.startswith('POLYGON'): - raise ValueError("The 'aoi_wkt' parameter must be a valid WKT POLYGON format") - - # Find the start of coordinates after POLYGON - polygon_prefix = 'POLYGON' - remaining_part = self.aoi_wkt[len(polygon_prefix):].strip() - - if not (remaining_part.startswith('((') and remaining_part.endswith('))')): - raise ValueError("The 'aoi_wkt' parameter must be a valid WKT POLYGON format: 'POLYGON((...))'") - - # Extract coordinate string - coord_string = remaining_part[2:-2] # Remove "((" and "))" - coord_pairs = [pair.strip() for pair in coord_string.split(',') if pair.strip()] - - if len(coord_pairs) < 4: - raise ValueError('WKT polygon must have at least 4 coordinate pairs (including closing coordinate)') - - # Validate and normalize each coordinate pair - normalized_coords = [] - for i, pair in enumerate(coord_pairs): - coords = pair.split() - if len(coords) != 2: - raise ValueError(f"Invalid coordinate pair at position {i + 1}: '{pair}'. Must be 'longitude latitude'") - - try: - lon, lat = float(coords[0]), float(coords[1]) - # Validate EPSG:4326 bounds - if not (-180 <= lon <= 180): - raise ValueError(f'Longitude {lon} at position {i + 1} is out of valid range [-180, 180]') - if not (-90 <= lat <= 90): - raise ValueError(f'Latitude {lat} at position {i + 1} is out of valid range [-90, 90]') - normalized_coords.append(f'{lon:g} {lat:g}') - except ValueError as e: - if 'could not convert' in str(e): - raise ValueError(f"Invalid coordinate values at position {i + 1}: '{pair}'. Must be numeric") + try: + _validate_supported_aoi_wkt(self.aoi_wkt) + except ValueError as exc: + if str(exc).startswith("Unsupported AOI WKT geometry type"): raise - - # Check if polygon is closed (first and last coordinates must be the same) - if normalized_coords[0] != normalized_coords[-1]: - raise ValueError("WKT polygon must start and end with the same point") - - # Reconstruct the WKT string with proper formatting - self.aoi_wkt = f"POLYGON(({', '.join(normalized_coords)}))" - - # Notify user if corrections were made - # if self.aoi_wkt != original_wkt: - # print('WKT polygon normalized: Whitespace and formatting corrected') + raise ValueError(f"The 'aoi_wkt' parameter must be valid WKT: {exc}") from exc def _validate_time(self): """ @@ -774,10 +998,14 @@ def _build_filter(self): self.filter_condition = " and ".join(filters) - def _build_query(self): + def _build_query(self, skip: typing.Optional[int] = None): """Build the full OData query URL""" self._build_filter() self.query = f"?$filter={self.filter_condition}&$orderby={self.order_by}&$top={self.top}" + + effective_skip = self.skip if skip is None else skip + if effective_skip is not None: + self.query += f"&$skip={effective_skip}" # Add $expand=Attributes only for non-burst mode if not self.burst_mode: @@ -851,13 +1079,7 @@ def _execute_paginated_query(self): urls = [] for skip in skips: - paginated_query = f"?$filter={self.filter_condition}&$orderby={self.order_by}&$top={page_size}&$skip={skip}" - # Add $expand=Attributes only for non-burst mode (Bursts API doesn't support it) - if not self.burst_mode: - paginated_query += "&$expand=Attributes" - if self.count: - paginated_query += "&$count=true" - urls.append(f"{self.base_url}{paginated_query}") + urls.append(self._build_query(skip=skip)) async def fetch_url(url): loop = asyncio.get_running_loop() @@ -1187,8 +1409,18 @@ def display_results(self, columns=None, top_n=10): def download_product(self, eo_product_name: str, output_dir: str, config_file = '.s5cfg', + mode: str = 'fast', verbose=True, - show_progress=True): + show_progress=True, + retry_count: int = 1, + connect_timeout: float = 30.0, + read_timeout: typing.Optional[float] = None, + state_file: typing.Optional[str] = None, + s5cmd_retry_count: typing.Optional[int] = None, + max_workers: typing.Optional[int] = None, + backoff_base: float = 2.0, + backoff_max: float = 60.0, + reset_config: bool = False): """ Download the EO product using the downloader module. @@ -1196,18 +1428,30 @@ def download_product(self, eo_product_name: str, eo_product_name: Name of the EO product to download output_dir: Local output directory for downloaded files config_file: Path to s5cmd configuration file + mode: Download mode ('fast' for s5cmd, 'safe' for resumable native downloads) verbose: Whether to print download information show_progress: Whether to show tqdm progress bar during download + retry_count: Number of command-level retry attempts + connect_timeout: Network connection timeout in seconds for native transfers + read_timeout: Network read timeout in seconds for native transfers + state_file: Optional JSON state file path for resumable runs + s5cmd_retry_count: Optional internal retry count for s5cmd + max_workers: Optional worker count for s5cmd + backoff_base: Base delay in seconds for retry backoff + backoff_max: Max delay in seconds for retry backoff + reset_config: Whether to reset configuration and prompt for credentials Returns: bool: True if download was successful, False otherwise """ + if mode not in {'fast', 'safe'}: + raise ValueError("mode must be either 'fast' or 'safe'") + res = self.query_by_name(eo_product_name) if res.empty: print(f"No product found with name: {eo_product_name}") return False - # file size in bytes content_length = res['ContentLength'].iloc[0] @@ -1217,16 +1461,77 @@ def download_product(self, eo_product_name: str, if verbose: print(f"Downloading product: {eo_product_name}") print(f"Output directory: {abs_output_dir}") + print(f"Mode: {mode}") s3path = res['S3Path'].iloc[0] - # Call the downloader function with progress bar - pull_down( - s3_path=s3path, - output_dir=abs_output_dir, - config_file=config_file, - total_size=content_length, - show_progress=show_progress + + # Choose download method based on mode + if mode == 'safe': + # Use resumable native download with command-level retries. + attempts = max(1, int(retry_count)) + should_reset_config = reset_config + last_error = None + + for attempt in range(attempts): + try: + if verbose and attempts > 1: + print(f"\n🔄 Attempt {attempt + 1}/{attempts}") + + result = download_s3_resumable( + s3_path=s3path, + output_dir=abs_output_dir, + config_file=config_file, + download_all=True, + state_file=state_file, + state_item_id=f'name:{eo_product_name}', + connect_timeout=connect_timeout, + read_timeout=read_timeout, + show_progress=show_progress, + attempts=attempt + 1, + persist_state=True, + reset_config=should_reset_config, + ) + if verbose and attempts > 1: + print(f"✅ Download successful on attempt {attempt + 1}/{attempts}") + return result.status in ('downloaded', 'skipped') + except Exception as exc: + last_error = str(exc) + should_reset_config = False + if attempt < attempts - 1: + delay = _compute_backoff_delay( + attempt, + backoff_base=backoff_base, + backoff_max=backoff_max, + ) + # Always print retry messages (important for user feedback) + print( + f"\n⚠️ Attempt {attempt + 1}/{attempts} failed: {type(exc).__name__}\n" + f" Retrying in {delay:.1f}s...\n" + ) + time.sleep(delay) + else: + # Last attempt failed + print(f"\n❌ All {attempts} attempts failed") + + if last_error is not None: + print(f"Final error: {last_error}") + return False + else: + # Use fast s5cmd download + success = pull_down( + s3_path=s3path, + output_dir=abs_output_dir, + config_file=config_file, + total_size=content_length, + show_progress=show_progress, + retry_count=retry_count, + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, + backoff_base=backoff_base, + backoff_max=backoff_max, + reset=reset_config, ) + return success # ------------------------------------------------------------------------- # Orbit Optimization Methods # ------------------------------------------------------------------------- @@ -1242,7 +1547,8 @@ def _get_aoi_centroid(self, aoi_wkt: typing.Optional[str] = None) -> typing.Tupl """Calculate the centroid of the AOI. Args: - aoi_wkt: WKT polygon string. Uses self.aoi_wkt if None. + aoi_wkt: Supported AOI WKT geometry used for centroid-based orbit heuristics. + Uses self.aoi_wkt if None. Returns: Tuple[float, float]: (longitude, latitude) of the centroid. @@ -1253,32 +1559,20 @@ def _get_aoi_centroid(self, aoi_wkt: typing.Optional[str] = None) -> typing.Tupl wkt = aoi_wkt or self.aoi_wkt if wkt is None: raise ValueError("AOI WKT is not set") - - # Parse WKT polygon to extract coordinates - wkt_upper = wkt.upper() - if not wkt_upper.startswith('POLYGON'): - raise ValueError("AOI must be a WKT POLYGON") - - # Extract coordinate string + try: - coord_str = wkt.split('((')[1].split('))')[0] - coords = [] - for pair in coord_str.split(','): - parts = pair.strip().split() - if len(parts) >= 2: - lon, lat = float(parts[0]), float(parts[1]) - coords.append((lon, lat)) - + normalized_wkt = " ".join(wkt.split()) + _validate_supported_aoi_wkt(normalized_wkt) + geometry_type, body = _parse_wkt_geometry(normalized_wkt) + coords = _centroid_coordinates_from_body(geometry_type, body) + if not coords: raise ValueError("Could not parse AOI coordinates") - - # Calculate centroid (simple average, excluding closing point) - coords = coords[:-1] if coords[0] == coords[-1] else coords + lon_avg = sum(c[0] for c in coords) / len(coords) lat_avg = sum(c[1] for c in coords) / len(coords) - return lon_avg, lat_avg - except (IndexError, ValueError) as e: + except ValueError as e: raise ValueError(f"Could not parse AOI WKT: {e}") def _get_recommended_orbit_direction(self, aoi_wkt: typing.Optional[str] = None) -> str: @@ -1288,7 +1582,8 @@ def _get_recommended_orbit_direction(self, aoi_wkt: typing.Optional[str] = None) For Asia/Australia (longitude 60 to 180): Ascending preferred Args: - aoi_wkt: WKT polygon string. Uses self.aoi_wkt if None. + aoi_wkt: Supported AOI WKT geometry used for centroid-based orbit heuristics. + Uses self.aoi_wkt if None. Returns: str: Recommended orbit direction ('ASCENDING' or 'DESCENDING'). @@ -1808,7 +2103,13 @@ def download_bursts( username: typing.Optional[str] = None, password: typing.Optional[str] = None, retry_count: int = 3, - verbose: bool = True + verbose: bool = True, + connect_timeout: float = REQUEST_TIMEOUT_SECONDS, + read_timeout: typing.Optional[float] = None, + state_file: typing.Optional[str] = None, + resume_mode: str = 'off', + backoff_base: float = 2.0, + backoff_max: float = 60.0, ) -> typing.Dict[str, typing.Any]: """Download burst products from a DataFrame. @@ -1822,6 +2123,12 @@ def download_bursts( password: CDSE password. Required for burst downloads. retry_count: Number of retry attempts for failed downloads. verbose: Whether to print progress information. + connect_timeout: HTTP connection timeout in seconds. + read_timeout: HTTP read timeout in seconds (None => same as connect timeout). + state_file: Optional JSON state file path for resumable runs. + resume_mode: Resume mode ('off' or 'product'). + backoff_base: Base delay in seconds for retry backoff. + backoff_max: Max delay in seconds for retry backoff. Returns: Dict containing: @@ -1844,15 +2151,22 @@ def download_bursts( if data is None or data.empty: logger.warning("No burst products to download") - return {'downloaded': 0, 'failed': 0, 'details': []} + return {'downloaded': 0, 'failed': 0, 'skipped': 0, 'details': []} if username is None or password is None: raise ValueError("CDSE username and password are required for burst downloads. " "Register at https://dataspace.copernicus.eu/") + if resume_mode not in {'off', 'product'}: + raise ValueError("resume_mode must be either 'off' or 'product'") # Ensure output directory exists output_path = Path(output_dir).absolute() output_path.mkdir(parents=True, exist_ok=True) + + state_store: typing.Optional[DownloadStateStore] = None + if resume_mode != 'off': + resolved_state_file = state_file or default_state_file(str(output_path)) + state_store = DownloadStateStore(resolved_state_file) # Create token manager for automatic token refresh if verbose: @@ -1869,6 +2183,7 @@ def download_bursts( summary = { 'downloaded': 0, 'failed': 0, + 'skipped': 0, 'details': [] } @@ -1888,6 +2203,21 @@ def download_bursts( if verbose: print(f"📥 Downloading burst {idx + 1}/{total} (BurstId: {burst_num})...") + + if state_store is not None: + existing = state_store.get(str(burst_id)) + existing_output = existing.get('output_path') if isinstance(existing, dict) else None + if existing and existing.get('status') == 'success' and existing_output and is_non_empty_file(existing_output): + summary['skipped'] += 1 + summary['details'].append({ + 'burst_id': burst_id, + 'burst_num': burst_num, + 'status': 'skipped', + 'reason': 'already_downloaded' + }) + if verbose: + print(" ⏭️ Skipped (already downloaded)") + continue success = False last_error = None @@ -1897,7 +2227,14 @@ def download_bursts( download_burst_on_demand( burst_id=burst_id, token=token_manager, - output_dir=output_path + output_dir=output_path, + connect_timeout=connect_timeout, + read_timeout=read_timeout, + retry_count=1, + state_file=state_file, + resume_mode=resume_mode, + backoff_base=backoff_base, + backoff_max=backoff_max, ) success = True break @@ -1905,6 +2242,9 @@ def download_bursts( last_error = str(e) if verbose and attempt < retry_count - 1: print(f" ⚠️ Attempt {attempt + 1} failed, retrying...") + if attempt < retry_count - 1: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + time.sleep(delay) if success: summary['downloaded'] += 1 @@ -1927,7 +2267,10 @@ def download_bursts( print(f" ❌ Failed: {last_error}") if verbose: - print(f"\n📊 Download complete: {summary['downloaded']} succeeded, {summary['failed']} failed") + print( + f"\n📊 Download complete: {summary['downloaded']} succeeded, " + f"{summary['failed']} failed, {summary['skipped']} skipped" + ) return summary @@ -1936,10 +2279,17 @@ def download_products( df: typing.Optional[pd.DataFrame] = None, output_dir: str = '.', config_file: str = '.s5cfg', + mode: str = 'fast', retry_count: int = 3, validate: bool = True, verbose: bool = True, - show_progress: bool = True + show_progress: bool = True, + state_file: typing.Optional[str] = None, + resume_mode: typing.Optional[str] = None, + s5cmd_retry_count: typing.Optional[int] = None, + max_workers: typing.Optional[int] = None, + backoff_base: float = 2.0, + backoff_max: float = 60.0, ) -> typing.Dict[str, typing.Any]: """Download multiple SLC/GRD products from a DataFrame. @@ -1950,10 +2300,17 @@ def download_products( df: DataFrame with products to download. Uses self.df if None. output_dir: Directory to save downloaded products. config_file: Path to s5cmd configuration file. + mode: Download mode ('fast' for s5cmd, 'safe' for resumable native downloads). retry_count: Number of retry attempts for failed downloads. validate: Whether to validate downloaded files (check manifest.safe exists). verbose: Whether to print progress information. show_progress: Whether to show tqdm progress bar. + state_file: Optional JSON state file path for resumable runs. + resume_mode: Deprecated legacy resume selector. Prefer ``mode``. + s5cmd_retry_count: Optional internal retry count for s5cmd. + max_workers: Optional worker count for s5cmd. + backoff_base: Base delay in seconds for retry backoff. + backoff_max: Max delay in seconds for retry backoff. Returns: Dict containing: @@ -1971,15 +2328,23 @@ def download_products( if data is None or data.empty: logger.warning("No products to download") - return {'downloaded': 0, 'failed': 0, 'details': []} + return {'downloaded': 0, 'failed': 0, 'skipped': 0, 'details': []} + effective_mode = _resolve_product_download_mode(mode, resume_mode=resume_mode) # Ensure output directory exists abs_output_dir = os.path.abspath(output_dir) os.makedirs(abs_output_dir, exist_ok=True) + + use_native = effective_mode == 'safe' + state_store: typing.Optional[DownloadStateStore] = None + if not use_native and resume_mode not in (None, 'off'): + resolved_state_file = state_file or default_state_file(abs_output_dir) + state_store = DownloadStateStore(resolved_state_file) summary = { 'downloaded': 0, 'failed': 0, + 'skipped': 0, 'details': [] } @@ -2000,35 +2365,129 @@ def download_products( if verbose: print(f"📥 Downloading {idx + 1}/{total}: {product_name}...") + + product_dir = os.path.join(abs_output_dir, product_name) + manifest_path = os.path.join(product_dir, 'manifest.safe') + + if not use_native and is_product_complete(product_dir): + if state_store is not None: + state_store.mark( + product_name, + 'success', + output_path=product_dir, + extra={'s3_path': s3_path}, + ) + summary['skipped'] += 1 + summary['details'].append({ + 'name': product_name, + 'status': 'skipped', + 'reason': 'already_downloaded' + }) + if verbose: + print(" ⏭️ Skipped (already downloaded)") + continue + + if state_store is not None: + existing = state_store.get(product_name) + existing_output = existing.get('output_path') if isinstance(existing, dict) else None + if existing and existing.get('status') == 'success' and existing_output and is_product_complete(existing_output): + summary['skipped'] += 1 + summary['details'].append({ + 'name': product_name, + 'status': 'skipped', + 'reason': 'already_downloaded' + }) + if verbose: + print(" ⏭️ Skipped (already downloaded)") + continue success = False last_error = None for attempt in range(retry_count): try: - pull_down( - s3_path=s3_path, - output_dir=abs_output_dir, - config_file=config_file, - total_size=content_length, - show_progress=show_progress - ) - - # Validate if enabled - if validate: - product_dir = os.path.join(abs_output_dir, product_name) - manifest_path = os.path.join(product_dir, 'manifest.safe') - if os.path.isdir(product_dir) and not os.path.exists(manifest_path): + if use_native: + result = download_s3_resumable( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + download_all=True, + state_file=state_file, + state_item_id=product_name, + show_progress=show_progress, + attempts=attempt + 1, + persist_state=True, + ) + if result.status == 'skipped': + summary['skipped'] += 1 + summary['details'].append({ + 'name': product_name, + 'status': 'skipped', + 'reason': 'already_downloaded' + }) + if verbose: + print(" ⏭️ Skipped (already downloaded)") + success = None + break + if validate and not is_product_complete(result.output_path): raise ValueError("manifest.safe not found - download may be incomplete") + else: + if state_store is not None: + state_store.mark( + product_name, + 'in_progress', + attempts=attempt + 1, + output_path=product_dir, + extra={'s3_path': s3_path}, + ) + pull_down( + s3_path=s3_path, + output_dir=abs_output_dir, + config_file=config_file, + total_size=content_length, + show_progress=show_progress, + retry_count=1, + s5cmd_retry_count=s5cmd_retry_count, + max_workers=max_workers, + backoff_base=backoff_base, + backoff_max=backoff_max, + ) + + # Validate if enabled + if validate: + if os.path.isdir(product_dir) and not os.path.exists(manifest_path): + raise ValueError("manifest.safe not found - download may be incomplete") success = True + if state_store is not None: + state_store.mark( + product_name, + 'success', + attempts=attempt + 1, + output_path=product_dir, + extra={'s3_path': s3_path}, + ) break except Exception as e: last_error = str(e) + if state_store is not None: + state_store.mark( + product_name, + 'failed', + attempts=attempt + 1, + error=last_error, + output_path=product_dir, + extra={'s3_path': s3_path}, + ) if verbose and attempt < retry_count - 1: print(f" ⚠️ Attempt {attempt + 1} failed, retrying...") + if attempt < retry_count - 1: + delay = _compute_backoff_delay(attempt, backoff_base=backoff_base, backoff_max=backoff_max) + time.sleep(delay) + if success is None: + continue if success: summary['downloaded'] += 1 summary['details'].append({ @@ -2048,6 +2507,9 @@ def download_products( print(f" ❌ Failed: {last_error}") if verbose: - print(f"\n📊 Download complete: {summary['downloaded']} succeeded, {summary['failed']} failed") + print( + f"\n📊 Download complete: {summary['downloaded']} succeeded, " + f"{summary['failed']} failed, {summary['skipped']} skipped" + ) return summary diff --git a/phidown/viz.py b/phidown/viz.py index 0fdeb29..eae258e 100644 --- a/phidown/viz.py +++ b/phidown/viz.py @@ -2,10 +2,18 @@ import ast import json import xml.etree.ElementTree as ET -from typing import Any, Dict, List, Optional +from typing import Any, Dict, List, Optional, Tuple import folium +from .search import ( + _coordinates_from_sequence, + _parse_coordinate, + _parse_wkt_geometry, + _split_wkt_components, + _unwrap_wkt_group, +) + def _coverage_to_color(value: Optional[float]) -> str: """Map coverage percentage (0-100) to a red-yellow-green color.""" @@ -41,11 +49,24 @@ def plot_kml_coordinates(kml_file: str, output_html: str = "map_overlay.html"): tree = ET.parse(kml_file) root = tree.getroot() - coordinates_text = root.find(".//gx:LatLonQuad/coordinates", namespace).text.strip() - coordinates = [ - [float(coord.split(",")[1]), float(coord.split(",")[0])] - for coord in coordinates_text.split() - ] + coordinates_node = root.find(".//gx:LatLonQuad/coordinates", namespace) + if coordinates_node is None or not coordinates_node.text or not coordinates_node.text.strip(): + raise ValueError("KML does not contain gx:LatLonQuad/coordinates data.") + + coordinates = [] + for coord in coordinates_node.text.split(): + parts = coord.split(",") + if len(parts) < 2: + raise ValueError(f"Invalid KML coordinate: {coord}") + try: + lon = float(parts[0]) + lat = float(parts[1]) + except ValueError as exc: + raise ValueError(f"Invalid numeric KML coordinate: {coord}") from exc + coordinates.append([lat, lon]) + + if len(coordinates) < 3: + raise ValueError("KML polygon requires at least three coordinate pairs.") coordinates.append(coordinates[0]) m = folium.Map(location=coordinates[0], zoom_start=10, tiles="CartoDB positron") @@ -72,8 +93,17 @@ def _parse_wkt_polygon(aoi_wkt: str) -> List[List[float]]: coords_txt = aoi_wkt.split("((", 1)[1].split("))", 1)[0] coordinates: List[List[float]] = [] for pair in coords_txt.split(","): - lon, lat = pair.strip().split()[:2] - coordinates.append([float(lat), float(lon)]) + parts = pair.strip().split() + if len(parts) < 2: + raise ValueError(f"Invalid WKT coordinate pair: {pair}") + try: + lon = float(parts[0]) + lat = float(parts[1]) + except ValueError as exc: + raise ValueError(f"Invalid numeric WKT coordinate pair: {pair}") from exc + coordinates.append([lat, lon]) + if not coordinates: + raise ValueError("Invalid AOI WKT. Polygon has no coordinates.") return coordinates @@ -120,17 +150,72 @@ def _normalize_footprint(value: Any) -> Optional[Dict[str, Any]]: if text.startswith("geography'SRID=4326;"): text = text.split(";", 1)[1].rstrip("'") - if text.upper().startswith("POLYGON(("): - coords_txt = text.split("((", 1)[1].split("))", 1)[0] - ring: List[List[float]] = [] - for pair in coords_txt.split(","): - lon, lat = pair.strip().split()[:2] - ring.append([float(lon), float(lat)]) - return {"type": "Polygon", "coordinates": [ring]} + try: + geometry_type, body = _parse_wkt_geometry(text) + + if geometry_type == "POINT": + return {"type": "Point", "coordinates": list(_parse_coordinate(_unwrap_wkt_group(body)))} + + if geometry_type == "MULTIPOINT": + coords: List[List[float]] = [] + for component in _split_wkt_components(_unwrap_wkt_group(body)): + if component.startswith("("): + coords.append(list(_parse_coordinate(_unwrap_wkt_group(component)))) + else: + coords.append(list(_parse_coordinate(component))) + return {"type": "MultiPoint", "coordinates": coords} + + if geometry_type == "LINESTRING": + return {"type": "LineString", "coordinates": [list(pair) for pair in _coordinates_from_sequence(_unwrap_wkt_group(body))]} + + if geometry_type == "MULTILINESTRING": + lines: List[List[List[float]]] = [] + for component in _split_wkt_components(_unwrap_wkt_group(body)): + lines.append([list(pair) for pair in _coordinates_from_sequence(_unwrap_wkt_group(component))]) + return {"type": "MultiLineString", "coordinates": lines} + + if geometry_type == "POLYGON": + rings: List[List[List[float]]] = [] + for ring in _split_wkt_components(_unwrap_wkt_group(body)): + rings.append([list(pair) for pair in _coordinates_from_sequence(_unwrap_wkt_group(ring))]) + return {"type": "Polygon", "coordinates": rings} + + if geometry_type == "MULTIPOLYGON": + polygons: List[List[List[List[float]]]] = [] + for polygon in _split_wkt_components(_unwrap_wkt_group(body)): + rings: List[List[List[float]]] = [] + for ring in _split_wkt_components(_unwrap_wkt_group(polygon)): + rings.append([list(pair) for pair in _coordinates_from_sequence(_unwrap_wkt_group(ring))]) + polygons.append(rings) + return {"type": "MultiPolygon", "coordinates": polygons} + except (TypeError, ValueError): + return None return None +def _geojson_coordinate_pairs(geojson: Dict[str, Any]) -> List[Tuple[float, float]]: + """Flatten GeoJSON coordinates into ``(lon, lat)`` pairs.""" + geometry_type = geojson.get("type") + coords = geojson.get("coordinates") + if geometry_type is None or coords is None: + return [] + + pairs: List[Tuple[float, float]] = [] + + def _walk(value: Any) -> None: + if not isinstance(value, list): + return + if len(value) >= 2 and all(isinstance(item, (int, float)) for item in value[:2]): + pairs.append((float(value[0]), float(value[1]))) + return + for item in value: + _walk(item) + + _walk(coords) + return pairs + + def plot_product_footprints( df, aoi_wkt: Optional[str] = None, @@ -172,26 +257,27 @@ def plot_product_footprints( else: raise ValueError("No footprint column found. Expected 'GeoFootprint' or 'Footprint'.") - aoi_latlon = _parse_wkt_polygon(aoi_wkt) if aoi_wkt else None + aoi_geojson = _normalize_footprint(aoi_wkt) if aoi_wkt else None + aoi_pairs = _geojson_coordinate_pairs(aoi_geojson) if aoi_geojson else [] - if aoi_latlon and len(aoi_latlon) > 1: - core = aoi_latlon[:-1] - center_lat = sum(p[0] for p in core) / len(core) - center_lon = sum(p[1] for p in core) / len(core) + if aoi_pairs: + center_lat = sum(pair[1] for pair in aoi_pairs) / len(aoi_pairs) + center_lon = sum(pair[0] for pair in aoi_pairs) / len(aoi_pairs) else: center_lat, center_lon = 0.0, 0.0 m = folium.Map(location=[center_lat, center_lon], zoom_start=zoom_start, tiles="CartoDB positron") - if aoi_latlon: + if aoi_geojson: aoi_group = folium.FeatureGroup(name="AOI", show=True) - folium.Polygon( - locations=aoi_latlon, - color="black", - weight=3, - fill=True, - fill_color="black", - fill_opacity=0.08, + folium.GeoJson( + data=aoi_geojson, + style_function=lambda _: { + "color": "black", + "weight": 3, + "fillColor": "black", + "fillOpacity": 0.08, + }, tooltip="AOI", ).add_to(aoi_group) aoi_group.add_to(m) diff --git a/pyproject.toml b/pyproject.toml index 740c86d..d2af451 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,16 +1,18 @@ [project] name = "phidown" -version = "0.1.25" +version = "0.1.26" description = "Get access to Copernicus data with a pythonic easy interface. Get your products in seconds not in months." authors = [ { name = "Roberto Del Prete", email = "roberto.delprete@esa.int; robertodelprete88@gmail.com" } ] dependencies = [ - "pandas>=1.5.2", # keep as is, already minimum version + "pandas>=1.5.2", + "boto3>=1.34.0", "s5cmd", "tqdm>=4.65.0", - "pyyaml>=6.0.0", # for YAML config file support + "pyyaml>=6.0.0", + "requests>=2.32.5", ] requires-python = ">=3.9" diff --git a/tests/test_burst_mode.py b/tests/test_burst_mode.py index d63cc0e..6b293ce 100644 --- a/tests/test_burst_mode.py +++ b/tests/test_burst_mode.py @@ -445,6 +445,21 @@ def test_build_query_with_top_and_orderby(self): assert '$top=50' in url assert '$orderby=ContentDate/Start desc' in url + def test_build_query_with_skip(self): + """Test query building with manual skip in burst mode.""" + searcher = CopernicusDataSearcher() + searcher.query_by_filter( + burst_mode=True, + burst_id=15804, + start_date='2024-08-01T00:00:00.000Z', + end_date='2024-08-15T00:00:00.000Z', + top=50, + skip=100, + ) + url = searcher._build_query() + assert '$skip=100' in url + assert '$expand=Attributes' not in url + class TestBurstModeBackwardCompatibility: """Test that burst mode doesn't break existing functionality.""" diff --git a/tests/test_cli.py b/tests/test_cli.py index 49d7186..d3076e9 100644 --- a/tests/test_cli.py +++ b/tests/test_cli.py @@ -6,6 +6,7 @@ from phidown.cli import ( download_by_name, download_by_s3path, + _resolve_download_mode, list_products, burst_coverage_analysis, main, @@ -16,8 +17,33 @@ class TestDownloadByName: """Test cases for download_by_name function.""" @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') @patch('phidown.cli.CopernicusDataSearcher') - def test_successful_download(self, mock_searcher_class, mock_pull_down): + def test_safe_mode_uses_native_download(self, mock_searcher_class, mock_native, mock_pull_down, tmp_path): + mock_searcher = MagicMock() + mock_searcher_class.return_value = mock_searcher + mock_searcher.query_by_name.return_value = pd.DataFrame( + {'S3Path': ['/eodata/Sentinel-1/SAR/test.SAFE'], 'ContentLength': [1024000]} + ) + product_dir = tmp_path / 'test.SAFE' + product_dir.mkdir(parents=True) + (product_dir / 'manifest.safe').write_text('ok', encoding='utf-8') + mock_native.return_value = MagicMock(status='downloaded', output_path=str(product_dir)) + + result = download_by_name( + product_name='TEST_PRODUCT', + output_dir=str(tmp_path), + mode='safe', + show_progress=False, + ) + + assert result is True + mock_native.assert_called_once() + mock_pull_down.assert_not_called() + + @patch('phidown.cli.pull_down') + @patch('phidown.cli.CopernicusDataSearcher') + def test_successful_download(self, mock_searcher_class, mock_pull_down, tmp_path): """Test successful product download by name.""" # Setup mock searcher mock_searcher = MagicMock() @@ -31,12 +57,18 @@ def test_successful_download(self, mock_searcher_class, mock_pull_down): mock_searcher.query_by_name.return_value = mock_df # Setup mock pull_down - mock_pull_down.return_value = True + def _fake_pull_down(**kwargs): + product_dir = tmp_path / 'test.SAFE' + product_dir.mkdir(parents=True, exist_ok=True) + (product_dir / 'manifest.safe').write_text('ok', encoding='utf-8') + return True + + mock_pull_down.side_effect = _fake_pull_down # Execute result = download_by_name( product_name='TEST_PRODUCT', - output_dir='/tmp/test', + output_dir=str(tmp_path), show_progress=False ) @@ -44,6 +76,31 @@ def test_successful_download(self, mock_searcher_class, mock_pull_down): assert result is True mock_searcher.query_by_name.assert_called_once_with('TEST_PRODUCT') mock_pull_down.assert_called_once() + assert mock_pull_down.call_args.kwargs['reset'] is False + + @patch('phidown.cli.time.sleep', return_value=None) + @patch('phidown.cli.pull_down') + @patch('phidown.cli.CopernicusDataSearcher') + def test_download_by_name_only_resets_on_first_retry_attempt(self, mock_searcher_class, mock_pull_down, mock_sleep): + mock_searcher = MagicMock() + mock_searcher_class.return_value = mock_searcher + mock_searcher.query_by_name.return_value = pd.DataFrame( + {'S3Path': ['/eodata/Sentinel-1/SAR/test.SAFE'], 'ContentLength': [1024000]} + ) + mock_pull_down.side_effect = [RuntimeError('transient'), None] + + result = download_by_name( + product_name='TEST_PRODUCT', + output_dir='/tmp/test', + reset_config=True, + retry_count=2, + show_progress=False, + ) + + assert result is False + assert mock_pull_down.call_count == 2 + assert mock_pull_down.call_args_list[0].kwargs['reset'] is True + assert mock_pull_down.call_args_list[1].kwargs['reset'] is False @patch('phidown.cli.CopernicusDataSearcher') def test_product_not_found(self, mock_searcher_class): @@ -79,10 +136,84 @@ def test_exception_handling(self, mock_searcher_class): # Verify assert result is False + @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') + @patch('phidown.cli.CopernicusDataSearcher') + def test_resume_mode_uses_native_download(self, mock_searcher_class, mock_native, mock_pull_down, tmp_path): + mock_searcher = MagicMock() + mock_searcher_class.return_value = mock_searcher + mock_searcher.query_by_name.return_value = pd.DataFrame( + {'S3Path': ['/eodata/Sentinel-1/SAR/test.SAFE'], 'ContentLength': [1024000]} + ) + product_dir = tmp_path / 'test.SAFE' + product_dir.mkdir(parents=True) + (product_dir / 'manifest.safe').write_text('ok', encoding='utf-8') + mock_native.return_value = MagicMock(status='downloaded', output_path=str(product_dir)) + + result = download_by_name( + product_name='TEST_PRODUCT', + output_dir=str(tmp_path), + show_progress=False, + resume_mode='product', + connect_timeout=12.0, + read_timeout=45.0, + ) + + assert result is True + mock_native.assert_called_once() + kwargs = mock_native.call_args.kwargs + assert kwargs['connect_timeout'] == 12.0 + assert kwargs['read_timeout'] == 45.0 + mock_pull_down.assert_not_called() + + @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') + @patch('phidown.cli.CopernicusDataSearcher') + def test_timeout_flags_use_native_download(self, mock_searcher_class, mock_native, mock_pull_down, tmp_path): + mock_searcher = MagicMock() + mock_searcher_class.return_value = mock_searcher + mock_searcher.query_by_name.return_value = pd.DataFrame( + {'S3Path': ['/eodata/Sentinel-1/SAR/test.SAFE'], 'ContentLength': [1024000]} + ) + product_dir = tmp_path / 'test.SAFE' + product_dir.mkdir(parents=True) + (product_dir / 'manifest.safe').write_text('ok', encoding='utf-8') + mock_native.return_value = MagicMock(status='downloaded', output_path=str(product_dir)) + + result = download_by_name( + product_name='TEST_PRODUCT', + output_dir=str(tmp_path), + show_progress=False, + resume_mode='off', + connect_timeout=5.0, + read_timeout=20.0, + ) + + assert result is True + mock_native.assert_called_once() + mock_pull_down.assert_not_called() + class TestDownloadByS3Path: """Test cases for download_by_s3path function.""" + @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') + def test_s3path_safe_mode_uses_native_download(self, mock_native, mock_pull_down): + mock_native.return_value = MagicMock(status='downloaded') + + result = download_by_s3path( + s3_path='/eodata/Sentinel-1/SAR/test.SAFE', + output_dir='/tmp/test', + mode='safe', + show_progress=False, + download_all=False, + ) + + assert result is True + mock_native.assert_called_once() + mock_pull_down.assert_not_called() + @patch('phidown.cli.pull_down') def test_successful_download(self, mock_pull_down): """Test successful download by S3 path.""" @@ -96,6 +227,7 @@ def test_successful_download(self, mock_pull_down): assert result is True mock_pull_down.assert_called_once() + assert mock_pull_down.call_args.kwargs['reset'] is False def test_invalid_s3_path(self): """Test validation of S3 path format.""" @@ -121,6 +253,47 @@ def test_download_all_parameter(self, mock_pull_down): call_kwargs = mock_pull_down.call_args[1] assert call_kwargs['download_all'] is False + @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') + def test_s3path_resume_mode_uses_native_download(self, mock_native, mock_pull_down): + mock_native.return_value = MagicMock(status='downloaded') + + result = download_by_s3path( + s3_path='/eodata/Sentinel-1/SAR/test.SAFE', + output_dir='/tmp/test', + show_progress=False, + download_all=False, + resume_mode='product', + connect_timeout=9.0, + read_timeout=30.0, + ) + + assert result is True + kwargs = mock_native.call_args.kwargs + assert kwargs['download_all'] is False + assert kwargs['connect_timeout'] == 9.0 + assert kwargs['read_timeout'] == 30.0 + mock_pull_down.assert_not_called() + + @patch('phidown.cli.pull_down') + @patch('phidown.cli.download_s3_resumable') + def test_s3path_timeout_flags_use_native_download(self, mock_native, mock_pull_down): + mock_native.return_value = MagicMock(status='downloaded') + + result = download_by_s3path( + s3_path='/eodata/Sentinel-1/SAR/test.SAFE', + output_dir='/tmp/test', + show_progress=False, + download_all=False, + resume_mode='off', + connect_timeout=7.0, + read_timeout=15.0, + ) + + assert result is True + mock_native.assert_called_once() + mock_pull_down.assert_not_called() + class TestMainCLI: """Test cases for main CLI entry point.""" @@ -136,7 +309,37 @@ def test_cli_with_name(self, mock_download): assert exc_info.value.code == 0 mock_download.assert_called_once() - + + @patch('phidown.cli.download_by_name') + @patch('sys.argv', ['phidown', '--name', 'TEST_PRODUCT', '-o', '/tmp/test', '--robust']) + def test_cli_with_name_robust_defaults(self, mock_download): + """Test robust preset is forwarded to download helper.""" + mock_download.return_value = True + + with pytest.raises(SystemExit) as exc_info: + main() + + assert exc_info.value.code == 0 + kwargs = mock_download.call_args.kwargs + assert kwargs['retry_count'] == 5 + assert kwargs['read_timeout'] == 900.0 + assert kwargs['mode'] == 'safe' + + @patch('phidown.cli.download_by_name') + @patch('sys.argv', ['phidown', '--name', 'TEST_PRODUCT', '-o', '/tmp/test', '--mode', 'safe']) + def test_cli_with_name_safe_mode(self, mock_download): + mock_download.return_value = True + + with pytest.raises(SystemExit) as exc_info: + main() + + assert exc_info.value.code == 0 + kwargs = mock_download.call_args.kwargs + assert kwargs['mode'] == 'safe' + assert kwargs['retry_count'] == 5 + assert kwargs['read_timeout'] == 900.0 + + @patch('phidown.cli.download_by_s3path') @patch('sys.argv', ['phidown', '--s3path', '/eodata/test', '-o', '/tmp/test']) def test_cli_with_s3path(self, mock_download): @@ -376,3 +579,10 @@ def test_burst_coverage_analysis_save_csv(self, mock_searcher_class, tmp_path): assert result is True assert output_file.exists() + + +def test_resolve_download_mode_resume_mode_compatibility(): + with pytest.warns(DeprecationWarning, match='Both mode and resume_mode were provided'): + assert _resolve_download_mode('fast', resume_mode='product') == 'safe' + with pytest.warns(DeprecationWarning, match='resume_mode="off" is deprecated'): + assert _resolve_download_mode('safe', resume_mode='off') == 'safe' diff --git a/tests/test_download_state.py b/tests/test_download_state.py new file mode 100644 index 0000000..892d4a9 --- /dev/null +++ b/tests/test_download_state.py @@ -0,0 +1,92 @@ +"""Tests for download state persistence and helpers.""" + +import os +from datetime import datetime, timezone + +from phidown.download_state import ( + DownloadStateStore, + default_state_file, + is_non_empty_file, + is_product_complete, + utc_now_iso, +) + + +def test_default_state_file_path(tmp_path): + out = default_state_file(str(tmp_path)) + # Use os.path.join for platform-independent path checking + expected_suffix = os.path.join('.phidown', 'download_state.json') + assert out.endswith(expected_suffix) + # Verify the .phidown directory is created + assert (tmp_path / '.phidown').is_dir() + + +def test_utc_now_iso_returns_aware_utc_timestamp(): + ts = utc_now_iso() + parsed = datetime.fromisoformat(ts) + + assert parsed.tzinfo is not None + assert parsed.utcoffset() == timezone.utc.utcoffset(parsed) + + +def test_state_store_persists_records(tmp_path): + state_path = tmp_path / 'state.json' + store = DownloadStateStore(str(state_path)) + + store.mark('item-1', 'in_progress', attempts=1, output_path='/tmp/item') + store.mark('item-1', 'success', attempts=1, output_path='/tmp/item') + + reloaded = DownloadStateStore(str(state_path)) + item = reloaded.get('item-1') + assert item is not None + assert item['status'] == 'success' + assert item['attempts'] == 1 + + +def test_state_store_recovers_from_invalid_json(tmp_path): + state_path = tmp_path / 'state.json' + state_path.write_text('{not valid json', encoding='utf-8') + + store = DownloadStateStore(str(state_path)) + + assert store.get('missing') is None + store.set('item-1', {'status': 'success'}) + assert store.get('item-1') == {'status': 'success'} + + +def test_mark_success_preserves_attempts_and_output_but_clears_error(tmp_path): + state_path = tmp_path / 'state.json' + store = DownloadStateStore(str(state_path)) + + store.mark('item-1', 'failed', attempts=2, output_path='/tmp/out', error='boom') + store.mark('item-1', 'success') + + record = store.get('item-1') + assert record is not None + assert record['status'] == 'success' + assert record['attempts'] == 2 + assert record['output_path'] == '/tmp/out' + assert 'error' not in record + + +def test_product_and_file_completion_helpers(tmp_path): + product_dir = tmp_path / 'A.SAFE' + product_dir.mkdir(parents=True) + manifest = product_dir / 'manifest.safe' + manifest.write_text('ok', encoding='utf-8') + + assert is_product_complete(str(product_dir)) + + fpath = tmp_path / 'file.bin' + fpath.write_bytes(b'abc') + assert is_non_empty_file(str(fpath)) + + empty_path = tmp_path / 'empty.bin' + empty_path.write_bytes(b'') + assert not is_non_empty_file(str(empty_path)) + + missing = tmp_path / 'missing.bin' + assert not is_non_empty_file(str(missing)) + + os.remove(manifest) + assert not is_product_complete(str(product_dir)) diff --git a/tests/test_insar_workflow.py b/tests/test_insar_workflow.py index bfc3d68..b81fbb6 100644 --- a/tests/test_insar_workflow.py +++ b/tests/test_insar_workflow.py @@ -1,9 +1,21 @@ +from pathlib import Path +from unittest.mock import MagicMock, patch + import pandas as pd +import pytest from phidown.insar_workflow import ( + _platform_filter, + _save_coverage_plot, + BurstSearchConfig, build_burst_workflow_config, - validate_burst_results, + compute_burst_statistics, debug_burst_summary, + find_orbit_configuration, + run_burst_workflow, + save_workflow_outputs, + search_bursts, + validate_burst_results, ) @@ -22,6 +34,72 @@ def test_build_burst_workflow_config_defaults(): assert cfg.search.platforms == ["ALL"] +def test_build_burst_workflow_config_rejects_invalid_sections(): + with pytest.raises(TypeError, match="dictionary"): + build_burst_workflow_config([]) + + with pytest.raises(TypeError, match="search"): + build_burst_workflow_config({"search": []}) + + +def test_platform_filter_behaviour(): + assert _platform_filter([]) is None + assert _platform_filter(["all"]) is None + assert _platform_filter(["a"]) == "A" + assert _platform_filter(["A", "B"]) is None + + +def test_find_orbit_configuration_uses_recommendation_when_missing_explicit_values(): + cfg = BurstSearchConfig( + aoi_wkt="POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))", + start_date="2025-01-01T00:00:00", + end_date="2025-01-10T00:00:00", + ) + searcher = MagicMock() + searcher.find_optimal_orbit.return_value = { + "recommended": {"orbit_direction": "DESCENDING", "relative_orbit": 66} + } + + orbit = find_orbit_configuration(cfg, searcher=searcher) + + assert orbit["orbit_direction"] == "DESCENDING" + assert orbit["relative_orbit"] == 66 + + +def test_search_bursts_filters_platforms_and_sorts_by_priority(): + cfg = BurstSearchConfig( + aoi_wkt="POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))", + start_date="2025-01-01T00:00:00", + end_date="2025-01-10T00:00:00", + platforms=["A", "B"], + ) + searcher = MagicMock() + searcher.find_optimal_orbit.return_value = { + "recommended": {"orbit_direction": "DESCENDING", "relative_orbit": 66} + } + searcher.execute_query.return_value = pd.DataFrame( + [ + {"Id": "1", "PlatformSerialIdentifier": "A", "SwathIdentifier": "IW2", "coverage": 50.0}, + {"Id": "2", "PlatformSerialIdentifier": "B", "SwathIdentifier": "IW1", "coverage": 50.0}, + {"Id": "3", "PlatformSerialIdentifier": "C", "SwathIdentifier": "IW1", "coverage": 90.0}, + {"Id": "4", "PlatformSerialIdentifier": "A", "SwathIdentifier": "IW3", "coverage": 10.0}, + ] + ) + + result = search_bursts(cfg, searcher=searcher) + + assert result["Id"].tolist() == ["2", "1", "4"] + assert searcher.query_by_filter.call_args.kwargs["count"] is True + assert searcher.query_by_filter.call_args.kwargs["platform_serial_identifier"] is None + + +def test_compute_burst_statistics_empty_short_circuit(): + searcher = MagicMock() + + assert compute_burst_statistics(pd.DataFrame(), searcher=searcher) == {} + searcher.compute_temporal_statistics.assert_not_called() + + def test_validate_burst_results_ok(): df = pd.DataFrame( [ @@ -55,3 +133,81 @@ def test_debug_burst_summary_content(): assert dbg["orbit_direction"] == "DESCENDING" assert dbg["relative_orbit"] == 66 assert dbg["coverage"]["max"] == 20.0 + + +@patch("phidown.insar_workflow._save_coverage_plot") +def test_save_workflow_outputs_writes_expected_files(mock_plot, tmp_path): + coverage_path = tmp_path / "coverage_results.png" + mock_plot.return_value = coverage_path + + paths = save_workflow_outputs( + df=None, + stats={"total_acquisitions": 2}, + validation={"ok": True}, + debug={"rows": 0}, + orbit={"orbit_direction": "ASCENDING"}, + output_dir=str(tmp_path), + save_results_csv=True, + ) + + assert paths["search_results_csv"] == tmp_path / "search_results.csv" + assert paths["coverage_plot_png"] == coverage_path + assert (tmp_path / "temporal_statistics.json").exists() + assert (tmp_path / "validation_report.json").exists() + assert (tmp_path / "debug_summary.json").exists() + + +def test_save_coverage_plot_returns_none_without_coverage(tmp_path): + df = pd.DataFrame([{"Id": "1"}]) + + assert _save_coverage_plot(df, Path(tmp_path)) is None + + +@patch("phidown.insar_workflow.save_workflow_outputs") +@patch("phidown.insar_workflow.debug_burst_summary") +@patch("phidown.insar_workflow.validate_burst_results") +@patch("phidown.insar_workflow.compute_burst_statistics") +@patch("phidown.insar_workflow.search_bursts") +@patch("phidown.insar_workflow.find_orbit_configuration") +@patch("phidown.insar_workflow.CopernicusDataSearcher") +def test_run_burst_workflow_orchestrates_helpers( + mock_searcher_class, + mock_find_orbit, + mock_search_bursts, + mock_compute_stats, + mock_validate_results, + mock_debug_summary, + mock_save_outputs, + tmp_path, +): + df = pd.DataFrame([{"Id": "1"}]) + orbit = {"orbit_direction": "DESCENDING", "relative_orbit": 66} + stats = {"total_acquisitions": 1} + validation = {"ok": True, "errors": [], "warnings": []} + debug = {"rows": 1} + + mock_find_orbit.return_value = orbit + mock_search_bursts.return_value = df + mock_compute_stats.return_value = stats + mock_validate_results.return_value = validation + mock_debug_summary.return_value = debug + mock_save_outputs.return_value = {"search_results_csv": tmp_path / "search_results.csv"} + + result = run_burst_workflow( + { + "search": { + "aoi_wkt": "POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))", + "start_date": "2025-01-01T00:00:00", + "end_date": "2025-01-10T00:00:00", + }, + "output_statistics": str(tmp_path), + } + ) + + assert result["df"].equals(df) + assert result["orbit"] == orbit + assert result["stats"] == stats + assert result["validation"] == validation + assert result["debug"] == debug + mock_searcher_class.assert_called_once() + mock_save_outputs.assert_called_once() diff --git a/tests/test_interactive_tools_unit.py b/tests/test_interactive_tools_unit.py new file mode 100644 index 0000000..e45064a --- /dev/null +++ b/tests/test_interactive_tools_unit.py @@ -0,0 +1,184 @@ +"""Unit tests for interactive helpers using fake optional modules.""" + +from __future__ import annotations + +import importlib +import os +import sys +import types + +sys.path.insert(0, os.path.abspath(os.path.join(os.path.dirname(__file__), '..'))) + + +class _DummyWidget: + def __init__(self, *args, **kwargs): + self.args = args + self.kwargs = kwargs + self.children = kwargs.get("children", []) + self.value = kwargs.get("value", "") + + def on_click(self, callback): + self._click_callback = callback + + def observe(self, callback, names=None): + self._observe_callback = callback + + +class _DummyOutput(_DummyWidget): + def __enter__(self): + return self + + def __exit__(self, exc_type, exc, tb): + return False + + +class _DummyMap: + def __init__(self, *args, **kwargs): + self.args = args + self.kwargs = kwargs + self.basemap = kwargs.get("basemap") + self.controls = [] + self.layers = [] + + def add_control(self, control): + self.controls.append(control) + + def add_layer(self, layer): + self.layers.append(layer) + + def fit_bounds(self, bounds): + self.bounds = bounds + + +class _DummyDrawControl(_DummyWidget): + def clear(self): + self.was_cleared = True + + def on_draw(self, callback): + self._draw_callback = callback + + +class _DummyGeoJSON(_DummyWidget): + pass + + +def _install_fake_interactive_modules(): + basemaps = types.SimpleNamespace( + OpenStreetMap=types.SimpleNamespace(Mapnik={"name": "OSM"}), + Esri=types.SimpleNamespace( + WorldImagery={"name": "World Imagery"}, + WorldTopoMap={"name": "World Topo"}, + WorldStreetMap={"name": "World Street"}, + WorldTerrain={"name": "World Terrain"}, + WorldPhysical={"name": "World Physical"}, + WorldShadedRelief={"name": "World Shaded Relief"}, + NatGeoWorldMap={"name": "NatGeo"}, + OceanBasemap={"name": "Ocean"}, + WorldGrayCanvas={"name": "Gray"}, + ArcticImagery={"name": "Arctic"}, + ), + NASAGIBS=types.SimpleNamespace( + BlueMarble={"name": "Blue Marble"}, + ViirsEarthAtNight2012={"name": "Night"}, + ModisTerraTrueColorCR={"name": "MODIS"}, + ViirsTrueColorCR={"name": "VIIRS"}, + MEaSUREsIceVelocity3031={"name": "Ice"}, + ModisTerraLSTDay={"name": "LST"}, + ModisTerraSnowCover={"name": "Snow"}, + ), + Stadia=types.SimpleNamespace( + AlidadeSatellite={"name": "Satellite"}, + OSMBright={"name": "Bright"}, + AlidadeSmooth={"name": "Smooth"}, + StamenTerrain={"name": "Terrain"}, + Outdoors={"name": "Outdoors"}, + AlidadeSmoothDark={"name": "Dark"}, + StamenToner={"name": "Toner"}, + StamenWatercolor={"name": "Watercolor"}, + ), + CartoDB=types.SimpleNamespace( + Positron={"name": "Positron"}, + Voyager={"name": "Voyager"}, + DarkMatter={"name": "Dark Matter"}, + ), + OpenTopoMap={"name": "OpenTopo"}, + ) + + ipyleaflet = types.ModuleType("ipyleaflet") + ipyleaflet.Map = _DummyMap + ipyleaflet.DrawControl = _DummyDrawControl + ipyleaflet.GeoJSON = _DummyGeoJSON + ipyleaflet.LayersControl = _DummyWidget + ipyleaflet.Marker = _DummyWidget + ipyleaflet.Popup = _DummyWidget + ipyleaflet.basemaps = basemaps + + ipywidgets = types.ModuleType("ipywidgets") + ipywidgets.VBox = _DummyWidget + ipywidgets.HBox = _DummyWidget + ipywidgets.Button = _DummyWidget + ipywidgets.Output = _DummyOutput + ipywidgets.HTML = _DummyWidget + ipywidgets.Textarea = _DummyWidget + ipywidgets.Label = _DummyWidget + ipywidgets.Layout = _DummyWidget + ipywidgets.Dropdown = _DummyWidget + + shapely = types.ModuleType("shapely") + shapely.geometry = types.ModuleType("shapely.geometry") + shapely.geometry.Polygon = _DummyWidget + shapely.geometry.mapping = lambda geometry: {"type": "Polygon", "geometry": geometry} + shapely.wkt = types.SimpleNamespace(loads=lambda value: types.SimpleNamespace(geom_type="Polygon", bounds=(0, 0, 1, 1))) + + sys.modules["ipyleaflet"] = ipyleaflet + sys.modules["ipywidgets"] = ipywidgets + sys.modules["shapely"] = shapely + sys.modules["shapely.geometry"] = shapely.geometry + + +def _reload_interactive_tools(): + for module_name in list(sys.modules): + if module_name == "phidown.interactive_tools": + sys.modules.pop(module_name) + return importlib.import_module("phidown.interactive_tools") + + +def test_create_polygon_tool_uses_requested_basemap(): + _install_fake_interactive_modules() + interactive_tools = _reload_interactive_tools() + + tool = interactive_tools.create_polygon_tool(basemap_type="satellite", show_basemap_switcher=False) + + assert tool.current_basemap == interactive_tools.basemaps.Esri.WorldImagery + assert tool.map.basemap == interactive_tools.basemaps.Esri.WorldImagery + + +def test_search_with_polygon_calls_public_query_method(monkeypatch): + _install_fake_interactive_modules() + interactive_tools = _reload_interactive_tools() + + class FakeSearcher: + instances = [] + + def __init__(self): + self.query_args = None + self.__class__.instances.append(self) + + def query_by_filter(self, **kwargs): + self.query_args = kwargs + + def execute_query(self): + return ["ok"] + + fake_search_module = types.ModuleType("phidown.search") + fake_search_module.CopernicusDataSearcher = FakeSearcher + monkeypatch.setitem(sys.modules, "phidown.search", fake_search_module) + + polygon_tool = types.SimpleNamespace( + get_wkt_polygons=lambda: ["POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))"] + ) + + result = interactive_tools.search_with_polygon(polygon_tool, collection_name="SENTINEL-2", product_type="S2MSI1C") + + assert result == ["ok"] + assert FakeSearcher.instances[0].query_args["collection_name"] == "SENTINEL-2" diff --git a/tests/test_native_download.py b/tests/test_native_download.py new file mode 100644 index 0000000..d9b0540 --- /dev/null +++ b/tests/test_native_download.py @@ -0,0 +1,190 @@ +import os +import sys + +sys.path.insert(0, os.path.abspath(os.path.join(os.path.dirname(__file__), '..'))) + +from phidown.native_download import download_s3_resumable + + +class _FakeBody: + def __init__(self, chunks): + self._chunks = chunks + + def iter_chunks(self, chunk_size=None): + for chunk in self._chunks: + yield chunk + + +class _FakeClient: + def __init__(self, *, head_map=None, list_pages=None, get_responses=None): + self.head_map = head_map or {} + self.list_pages = list_pages or [] + self.get_responses = list(get_responses or []) + self.get_calls = [] + + def head_object(self, Bucket, Key): + return self.head_map[(Bucket, Key)] + + def get_paginator(self, name): + assert name == "list_objects_v2" + + class _Paginator: + def __init__(self, pages): + self.pages = pages + + def paginate(self, **kwargs): + return list(self.pages) + + return _Paginator(self.list_pages) + + def get_object(self, **kwargs): + self.get_calls.append(kwargs) + return self.get_responses.pop(0) + + +def test_download_s3_resumable_resumes_single_object_with_range(tmp_path, monkeypatch): + output_dir = tmp_path / "out" + final_path = output_dir / "file.bin" + temp_path = final_path.with_suffix(".bin.part") + temp_path.parent.mkdir(parents=True, exist_ok=True) + temp_path.write_bytes(b"head") + + client = _FakeClient( + head_map={ + ("eodata", "Sentinel-1/SAR/file.bin"): { + "ContentLength": 8, + "ETag": '"etag-1"', + } + }, + get_responses=[ + { + "ResponseMetadata": {"HTTPStatusCode": 206}, + "Body": _FakeBody([b"tail"]), + } + ], + ) + + monkeypatch.setattr("phidown.native_download.ensure_s5cmd_config", lambda *args, **kwargs: None) + monkeypatch.setattr("phidown.native_download._build_s3_client", lambda *args, **kwargs: client) + + result = download_s3_resumable( + s3_path="/eodata/Sentinel-1/SAR/file.bin", + output_dir=str(output_dir), + config_file=str(tmp_path / ".s5cfg"), + download_all=False, + ) + + assert result.status == "downloaded" + assert final_path.read_bytes() == b"headtail" + assert not temp_path.exists() + assert client.get_calls[0]["Range"] == "bytes=4-" + + +def test_download_s3_resumable_restarts_when_range_not_honored(tmp_path, monkeypatch): + output_dir = tmp_path / "out" + final_path = output_dir / "file.bin" + temp_path = final_path.with_suffix(".bin.part") + temp_path.parent.mkdir(parents=True, exist_ok=True) + temp_path.write_bytes(b"old") + + client = _FakeClient( + head_map={ + ("eodata", "Sentinel-1/SAR/file.bin"): { + "ContentLength": 8, + "ETag": '"etag-1"', + } + }, + get_responses=[ + { + "ResponseMetadata": {"HTTPStatusCode": 200}, + "Body": _FakeBody([b"ignored"]), + }, + { + "ResponseMetadata": {"HTTPStatusCode": 200}, + "Body": _FakeBody([b"freshdat"]), + }, + ], + ) + + monkeypatch.setattr("phidown.native_download.ensure_s5cmd_config", lambda *args, **kwargs: None) + monkeypatch.setattr("phidown.native_download._build_s3_client", lambda *args, **kwargs: client) + + result = download_s3_resumable( + s3_path="/eodata/Sentinel-1/SAR/file.bin", + output_dir=str(output_dir), + config_file=str(tmp_path / ".s5cfg"), + download_all=False, + ) + + assert result.status == "downloaded" + assert final_path.read_bytes() == b"freshdat" + assert len(client.get_calls) == 2 + assert client.get_calls[0]["Range"] == "bytes=3-" + assert "Range" not in client.get_calls[1] + + +def test_single_object_download_uses_requested_output_dir_basename(tmp_path, monkeypatch): + output_dir = tmp_path / "out" + key = "Sentinel-1/A/path/shared.bin" + client = _FakeClient( + head_map={ + ("eodata", key): {"ContentLength": 3, "ETag": '"a"'}, + }, + get_responses=[ + {"ResponseMetadata": {"HTTPStatusCode": 200}, "Body": _FakeBody([b"one"])}, + ], + ) + + monkeypatch.setattr("phidown.native_download.ensure_s5cmd_config", lambda *args, **kwargs: None) + monkeypatch.setattr("phidown.native_download._build_s3_client", lambda *args, **kwargs: client) + + result = download_s3_resumable( + s3_path=f"/eodata/{key}", + output_dir=str(output_dir), + config_file=str(tmp_path / ".s5cfg"), + download_all=False, + persist_state=False, + ) + + expected_path = output_dir / "shared.bin" + assert result.output_path == str(expected_path) + assert expected_path.read_bytes() == b"one" + + +def test_single_object_download_redownloads_same_basename_without_state(tmp_path, monkeypatch): + output_dir = tmp_path / "out" + key_a = "Sentinel-1/A/path/shared.bin" + key_b = "Sentinel-2/B/path/shared.bin" + client = _FakeClient( + head_map={ + ("eodata", key_a): {"ContentLength": 3, "ETag": '"a"'}, + ("eodata", key_b): {"ContentLength": 3, "ETag": '"b"'}, + }, + get_responses=[ + {"ResponseMetadata": {"HTTPStatusCode": 200}, "Body": _FakeBody([b"one"])}, + {"ResponseMetadata": {"HTTPStatusCode": 200}, "Body": _FakeBody([b"two"])}, + ], + ) + + monkeypatch.setattr("phidown.native_download.ensure_s5cmd_config", lambda *args, **kwargs: None) + monkeypatch.setattr("phidown.native_download._build_s3_client", lambda *args, **kwargs: client) + + first = download_s3_resumable( + s3_path=f"/eodata/{key_a}", + output_dir=str(output_dir), + config_file=str(tmp_path / ".s5cfg"), + download_all=False, + persist_state=False, + ) + second = download_s3_resumable( + s3_path=f"/eodata/{key_b}", + output_dir=str(output_dir), + config_file=str(tmp_path / ".s5cfg"), + download_all=False, + persist_state=False, + ) + + assert first.output_path == second.output_path == str(output_dir / "shared.bin") + assert os.path.exists(second.output_path) + assert (output_dir / "shared.bin").read_bytes() == b"two" + assert len(client.get_calls) == 2 diff --git a/tests/test_package_init.py b/tests/test_package_init.py new file mode 100644 index 0000000..96e269d --- /dev/null +++ b/tests/test_package_init.py @@ -0,0 +1,68 @@ +"""Tests for package-level lazy exports and import boundaries.""" + +import builtins +import importlib +import os +import sys + +import pytest + +sys.path.insert(0, os.path.abspath(os.path.join(os.path.dirname(__file__), '..'))) + + +def _clear_phidown_modules(): + removed = {} + for module_name in list(sys.modules): + if module_name == "phidown" or module_name.startswith("phidown."): + removed[module_name] = sys.modules.pop(module_name) + return removed + + +def test_importing_submodule_does_not_require_unrelated_runtime_deps(monkeypatch): + original_import = builtins.__import__ + + def guarded_import(name, globals=None, locals=None, fromlist=(), level=0): + if name == "pandas": + raise ImportError("blocked pandas for lazy import test") + return original_import(name, globals, locals, fromlist, level) + + removed = _clear_phidown_modules() + monkeypatch.setattr(builtins, "__import__", guarded_import) + + try: + module = importlib.import_module("phidown.download_state") + # Use os.path.join for platform-independent path checking + expected_suffix = os.path.join(".phidown", "download_state.json") + assert module.default_state_file("/tmp").endswith(expected_suffix) + finally: + _clear_phidown_modules() + sys.modules.update(removed) + + +def test_package_getattr_lazy_loads_known_exports(monkeypatch): + import phidown + + monkeypatch.setitem( + phidown._LAZY_EXPORTS, + "download_state_file", + ("phidown.download_state", "default_state_file"), + ) + + assert "download_state_file" not in phidown.__dict__ + assert phidown.download_state_file.__name__ == "default_state_file" + + +def test_package_getattr_rejects_unknown_exports(): + import phidown + + with pytest.raises(AttributeError): + getattr(phidown, "does_not_exist") + + +def test_optional_exports_raise_helpful_import_error(monkeypatch): + import phidown + + monkeypatch.setattr(phidown, "_dependencies_available", lambda dependencies: False) + + with pytest.raises(ImportError, match="optional dependencies"): + getattr(phidown, "plot_kml_coordinates") diff --git a/tests/test_pagination.py b/tests/test_pagination.py index e1f6001..d90e0e0 100644 --- a/tests/test_pagination.py +++ b/tests/test_pagination.py @@ -180,3 +180,63 @@ def mock_get(url, timeout=None): # Should return at least the first page assert len(df) == 5 assert 'product_0' in df['Id'].values + + +def test_manual_skip_fetches_single_page(): + """Test that manual skip fetches only the requested page.""" + searcher = CopernicusDataSearcher() + searcher.query_by_filter( + collection_name='SENTINEL-1', + product_type='SLC', + top=5, + skip=10, + ) + + mock_response = Mock() + mock_response.json.return_value = { + 'value': [{'Id': f'product_{i}', 'Name': f'name_{i}'} for i in range(10, 15)], + '@odata.count': 25, + } + mock_response.raise_for_status = Mock() + + with patch('requests.get', return_value=mock_response) as mock_get: + df = searcher.execute_query() + + assert mock_get.call_count == 1 + assert len(df) == 5 + assert '$skip=10' in mock_get.call_args[0][0] + + +def test_count_and_skip_cannot_be_combined(): + """Test that explicit skip is rejected when count pagination is enabled.""" + searcher = CopernicusDataSearcher() + + with pytest.raises(ValueError, match="count' and 'skip"): + searcher.query_by_filter( + collection_name='SENTINEL-1', + product_type='SLC', + top=5, + count=True, + skip=10, + ) + + +@pytest.mark.parametrize( + ("skip", "expected_exception", "message"), + [ + (-1, ValueError, "greater than or equal to 0"), + ("10", TypeError, "must be an integer"), + (True, TypeError, "must be an integer"), + ], +) +def test_skip_validation(skip, expected_exception, message): + """Test validation of manual skip values.""" + searcher = CopernicusDataSearcher() + + with pytest.raises(expected_exception, match=message): + searcher.query_by_filter( + collection_name='SENTINEL-1', + product_type='SLC', + top=5, + skip=skip, + ) diff --git a/tests/test_s1_slc_burst.py b/tests/test_s1_slc_burst.py index d56dec4..0f996fa 100644 --- a/tests/test_s1_slc_burst.py +++ b/tests/test_s1_slc_burst.py @@ -44,6 +44,55 @@ def test_centroid_calculation_with_stored_aoi(self): assert abs(lon - 11.0) < 0.1 assert abs(lat - 46.0) < 0.1 + + def test_centroid_calculation_point(self): + """Test centroid calculation for a point AOI.""" + searcher = CopernicusDataSearcher() + + lon, lat = searcher._get_aoi_centroid('POINT(12.5 41.9)') + + assert lon == 12.5 + assert lat == 41.9 + + def test_centroid_calculation_multipoint(self): + """Test centroid calculation for a multipoint AOI.""" + searcher = CopernicusDataSearcher() + + lon, lat = searcher._get_aoi_centroid('MULTIPOINT((10 40), (14 44))') + + assert abs(lon - 12.0) < 0.1 + assert abs(lat - 42.0) < 0.1 + + def test_centroid_calculation_linestring(self): + """Test centroid calculation for a linestring AOI.""" + searcher = CopernicusDataSearcher() + + lon, lat = searcher._get_aoi_centroid('LINESTRING(10 40, 14 44)') + + assert abs(lon - 12.0) < 0.1 + assert abs(lat - 42.0) < 0.1 + + def test_centroid_calculation_multilinestring(self): + """Test centroid calculation for a multilinestring AOI.""" + searcher = CopernicusDataSearcher() + + lon, lat = searcher._get_aoi_centroid( + 'MULTILINESTRING((10 40, 12 42), (14 44, 16 46))' + ) + + assert abs(lon - 13.0) < 0.1 + assert abs(lat - 43.0) < 0.1 + + def test_centroid_calculation_multipolygon(self): + """Test centroid calculation for a multipolygon AOI.""" + searcher = CopernicusDataSearcher() + + lon, lat = searcher._get_aoi_centroid( + 'MULTIPOLYGON(((10 40, 12 40, 12 42, 10 42, 10 40)), ((14 44, 16 44, 16 46, 14 46, 14 44)))' + ) + + assert abs(lon - 13.0) < 0.1 + assert abs(lat - 43.0) < 0.1 def test_centroid_missing_aoi_raises_error(self): """Test that missing AOI raises ValueError.""" @@ -103,6 +152,14 @@ def test_australia_region_recommends_ascending(self): assert direction == 'ASCENDING' + def test_point_aoi_recommends_descending_for_europe(self): + """Test that point AOIs work with orbit direction heuristics.""" + searcher = CopernicusDataSearcher() + + direction = searcher._get_recommended_orbit_direction('POINT(12.5 41.9)') + + assert direction == 'DESCENDING' + class TestSubswathPriority: """Tests for subswath priority ordering.""" diff --git a/tests/test_s5cmd_utils.py b/tests/test_s5cmd_utils.py index e5fc30d..2e262cc 100644 --- a/tests/test_s5cmd_utils.py +++ b/tests/test_s5cmd_utils.py @@ -4,7 +4,7 @@ import pytest -from phidown.s5cmd_utils import _split_command_args, pull_down, run_s5cmd_with_config +from phidown.s5cmd_utils import _split_command_args, get_directory_size, pull_down, run_s5cmd_with_config def _write_s5cfg(path): @@ -48,7 +48,7 @@ def test_run_s5cmd_with_config_accepts_command_list(mock_popen, tmp_path): proc = Mock() stdout = Mock() - stdout.readline.side_effect = ["copy done\n", ""] + stdout.read1.side_effect = [b"copy done\n", b""] proc.stdout = stdout proc.wait.return_value = 0 mock_popen.return_value = proc @@ -70,6 +70,32 @@ def test_run_s5cmd_with_config_accepts_command_list(mock_popen, tmp_path): assert env["AWS_DEFAULT_REGION"] == "eu-central-1" +@patch("phidown.s5cmd_utils.subprocess.Popen") +def test_run_s5cmd_with_config_sets_global_flags(mock_popen, tmp_path): + cfg = tmp_path / ".s5cfg" + _write_s5cfg(cfg) + + proc = Mock() + stdout = Mock() + stdout.read1.side_effect = [b"ok\n", b""] + proc.stdout = stdout + proc.wait.return_value = 0 + mock_popen.return_value = proc + + run_s5cmd_with_config( + ["cp", "s3:/bucket/file", f"{tmp_path}/"], + config_file=str(cfg), + s5cmd_retry_count=12, + max_workers=48, + ) + + called_cmd = mock_popen.call_args.args[0] + assert "--retry-count" in called_cmd + assert "12" in called_cmd + assert "--numworkers" in called_cmd + assert "48" in called_cmd + + def test_run_s5cmd_with_config_rejects_empty_command_sequence(tmp_path): cfg = tmp_path / ".s5cfg" _write_s5cfg(cfg) @@ -77,6 +103,20 @@ def test_run_s5cmd_with_config_rejects_empty_command_sequence(tmp_path): run_s5cmd_with_config([], config_file=str(cfg)) +def test_get_directory_size_counts_nested_files(tmp_path): + root = tmp_path / "data" + child = root / "nested" + child.mkdir(parents=True) + (root / "a.bin").write_bytes(b"1234") + (child / "b.bin").write_bytes(b"12") + + assert get_directory_size(str(root)) == 6 + + +def test_get_directory_size_missing_directory_returns_zero(tmp_path): + assert get_directory_size(str(tmp_path / "missing")) == 0 + + @patch("phidown.s5cmd_utils.run_s5cmd_with_config") def test_pull_down_passes_list_command_and_preserves_spaces(mock_run, tmp_path): cfg = tmp_path / ".s5cfg" @@ -105,3 +145,27 @@ def test_pull_down_passes_list_command_and_preserves_spaces(mock_run, tmp_path): f"s3:/{s3_path}/*", expected_target, ] + + +@patch("phidown.s5cmd_utils.run_s5cmd_with_config") +def test_pull_down_passes_s5cmd_retry_and_workers(mock_run, tmp_path): + cfg = tmp_path / ".s5cfg" + _write_s5cfg(cfg) + + output_dir = tmp_path / "out" + s3_path = "/eodata/Sentinel-1/SAR/path/product.SAFE" + + ok = pull_down( + s3_path=s3_path, + output_dir=str(output_dir), + config_file=str(cfg), + show_progress=False, + retry_count=1, + s5cmd_retry_count=7, + max_workers=32, + ) + + assert ok is True + kwargs = mock_run.call_args.kwargs + assert kwargs["s5cmd_retry_count"] == 7 + assert kwargs["max_workers"] == 32 diff --git a/tests/test_search.py b/tests/test_search.py index 479ab63..d24fe55 100644 --- a/tests/test_search.py +++ b/tests/test_search.py @@ -91,23 +91,66 @@ def test_searcher_invalid_cloud_cover_high(): # Test invalid AOI WKT format def test_searcher_invalid_aoi_wkt_format(): - with pytest.raises(ValueError, match="must be a valid WKT POLYGON"): + with pytest.raises(ValueError, match="must be valid WKT"): CopernicusDataSearcher( config_path=CONFIG_PATH, collection_name='SENTINEL-1', product_type='SLC', - aoi_wkt='INVALID WKT' + aoi_wkt='POINT(12.4)' ) -# Test invalid AOI WKT polygon (start/end points differ) -def test_searcher_invalid_aoi_wkt_polygon(): - with pytest.raises(ValueError, match="must start and end with the same point"): +@pytest.mark.parametrize( + "aoi_wkt", + [ + 'POINT(12.4 41.9)', + 'MULTIPOINT((12.4 41.9), (12.5 42.0))', + 'LINESTRING(12.4 41.9, 12.5 42.0)', + 'MULTILINESTRING((12.4 41.9, 12.5 42.0), (12.6 42.1, 12.7 42.2))', + 'POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))', + 'MULTIPOLYGON(((0 0, 1 0, 1 1, 0 1, 0 0)), ((2 2, 3 2, 3 3, 2 3, 2 2)))', + ], +) +def test_searcher_accepts_supported_aoi_wkt_geometries(aoi_wkt): + searcher = CopernicusDataSearcher( + config_path=CONFIG_PATH, + collection_name='SENTINEL-1', + product_type='SLC', + aoi_wkt=aoi_wkt, + ) + assert searcher.aoi_wkt == aoi_wkt + + +def test_searcher_rejects_unsupported_aoi_wkt_geometry(): + with pytest.raises(ValueError, match="Unsupported AOI WKT geometry type 'GEOMETRYCOLLECTION'"): + CopernicusDataSearcher( + config_path=CONFIG_PATH, + collection_name='SENTINEL-1', + product_type='SLC', + aoi_wkt='GEOMETRYCOLLECTION(POINT(0 0), POINT(1 1))' + ) + + +@pytest.mark.parametrize( + ("aoi_wkt", "message"), + [ + ( + 'POLYGON((0 0, 1 0, 1 1, 0 1))', + 'WKT polygon ring must start and end with the same point', + ), + ( + 'POLYGON((0 0, 1 0, 0 0))', + 'WKT polygon ring must have at least 4 coordinate pairs', + ), + ], +) +def test_searcher_rejects_invalid_polygon_rings(aoi_wkt, message): + with pytest.raises(ValueError, match=message): CopernicusDataSearcher( config_path=CONFIG_PATH, collection_name='SENTINEL-1', product_type='SLC', - aoi_wkt='POLYGON((0 0, 1 0, 1 1, 0 1))' + aoi_wkt=aoi_wkt, ) @@ -223,5 +266,40 @@ def test_build_query(): ) assert url == expected_url + +def test_build_query_with_skip(): + searcher = CopernicusDataSearcher( + config_path=CONFIG_PATH, + collection_name='SENTINEL-1', + product_type='GRD', + top=10, + skip=20, + ) + url = searcher._build_query() + assert "&$skip=20" in url + + +@pytest.mark.parametrize( + "aoi_wkt", + [ + 'POINT(12.4 41.9)', + 'MULTIPOINT((12.4 41.9), (12.5 42.0))', + 'LINESTRING(12.4 41.9, 12.5 42.0)', + 'MULTILINESTRING((12.4 41.9, 12.5 42.0), (12.6 42.1, 12.7 42.2))', + 'POLYGON((0 0, 1 0, 1 1, 0 1, 0 0))', + 'MULTIPOLYGON(((0 0, 1 0, 1 1, 0 1, 0 0)), ((2 2, 3 2, 3 3, 2 3, 2 2)))', + ], +) +def test_build_query_serializes_supported_aoi_geometries(aoi_wkt): + searcher = CopernicusDataSearcher( + config_path=CONFIG_PATH, + collection_name='SENTINEL-1', + product_type='GRD', + aoi_wkt=aoi_wkt, + top=10, + ) + url = searcher._build_query() + assert f"geography'SRID=4326;{aoi_wkt}'" in url + # Add more tests for execute_query and display_results using mocking (pytest-mock) # These would involve mocking the 'requests.get' call and the pandas DataFrame creation. diff --git a/tests/test_search_download_product.py b/tests/test_search_download_product.py new file mode 100644 index 0000000..508f767 --- /dev/null +++ b/tests/test_search_download_product.py @@ -0,0 +1,64 @@ +"""Tests for CopernicusDataSearcher.download_product retry behavior.""" + +from unittest.mock import MagicMock, patch + +import pandas as pd + +from phidown.search import CopernicusDataSearcher + + +class TestDownloadProduct: + """Retry-focused tests for single-product downloads.""" + + @patch("phidown.search.time.sleep", return_value=None) + @patch("phidown.search.download_s3_resumable") + def test_safe_mode_retries_until_success(self, mock_native, mock_sleep): + searcher = CopernicusDataSearcher() + searcher.query_by_name = MagicMock(return_value=pd.DataFrame( + {"S3Path": ["/eodata/Sentinel-1/SAR/test.SAFE"], "ContentLength": [1024]} + )) + + mock_native.side_effect = [ + RuntimeError("transient"), + MagicMock(status="downloaded"), + ] + + result = searcher.download_product( + "TEST_PRODUCT", + output_dir=".", + mode="safe", + retry_count=3, + show_progress=False, + verbose=False, + reset_config=True, + ) + + assert result is True + assert mock_native.call_count == 2 + assert mock_native.call_args_list[0].kwargs["attempts"] == 1 + assert mock_native.call_args_list[1].kwargs["attempts"] == 2 + assert mock_native.call_args_list[0].kwargs["reset_config"] is True + assert mock_native.call_args_list[1].kwargs["reset_config"] is False + mock_sleep.assert_called_once() + + @patch("phidown.search.time.sleep", return_value=None) + @patch("phidown.search.download_s3_resumable", side_effect=RuntimeError("boom")) + def test_safe_mode_returns_false_after_retry_exhaustion(self, mock_native, mock_sleep): + searcher = CopernicusDataSearcher() + searcher.query_by_name = MagicMock(return_value=pd.DataFrame( + {"S3Path": ["/eodata/Sentinel-1/SAR/test.SAFE"], "ContentLength": [1024]} + )) + + result = searcher.download_product( + "TEST_PRODUCT", + output_dir=".", + mode="safe", + retry_count=3, + show_progress=False, + verbose=False, + ) + + assert result is False + assert mock_native.call_count == 3 + assert [call.kwargs["attempts"] for call in mock_native.call_args_list] == [1, 2, 3] + assert mock_sleep.call_count == 2 diff --git a/tests/test_token_manager.py b/tests/test_token_manager.py index 41a6876..79a4cb9 100644 --- a/tests/test_token_manager.py +++ b/tests/test_token_manager.py @@ -7,6 +7,7 @@ import pytest import time +import tempfile from unittest.mock import Mock, patch, MagicMock import sys import os @@ -17,6 +18,7 @@ # Import modules directly to avoid folium dependency in __init__.py import phidown.downloader as downloader_module +from phidown.download_state import DownloadStateStore class TestTokenManager: @@ -250,6 +252,73 @@ def test_download_burst_insecure_opt_out_sets_verify_false(self, mock_post): assert mock_post.call_args.kwargs['verify'] is False assert mock_post.call_args.kwargs['timeout'] == downloader_module.REQUEST_TIMEOUT_SECONDS + + @patch('phidown.downloader.requests.post') + def test_download_burst_resumes_with_range_header(self, mock_post): + burst_response = Mock() + burst_response.status_code = 206 + burst_response.headers = {'Content-Disposition': 'filename=burst_test.zip'} + burst_response.iter_content = Mock(return_value=[b'tail']) + mock_post.return_value = burst_response + + with tempfile.TemporaryDirectory() as tmpdir: + state_file = Path(tmpdir) / 'state.json' + output_file = Path(tmpdir) / 'burst_test.zip' + temp_file = output_file.with_suffix('.zip.part') + temp_file.write_bytes(b'head') + DownloadStateStore(str(state_file)).mark( + '12345678-1234-1234-1234-123456789abc', + 'failed', + output_path=str(output_file), + ) + + downloader_module.download_burst_on_demand( + burst_id='12345678-1234-1234-1234-123456789abc', + token='static_token_string', + output_dir=Path(tmpdir), + state_file=str(state_file), + resume_mode='product', + ) + + assert output_file.read_bytes() == b'headtail' + assert mock_post.call_args.kwargs['headers']['Range'] == 'bytes=4-' + + @patch('phidown.downloader.requests.post') + def test_download_burst_restarts_if_range_not_honored(self, mock_post): + first_response = Mock() + first_response.status_code = 200 + first_response.headers = {'Content-Disposition': 'filename=burst_test.zip'} + first_response.iter_content = Mock(return_value=[b'ignored']) + + second_response = Mock() + second_response.status_code = 200 + second_response.headers = {'Content-Disposition': 'filename=burst_test.zip'} + second_response.iter_content = Mock(return_value=[b'freshdata']) + + mock_post.side_effect = [first_response, second_response] + + with tempfile.TemporaryDirectory() as tmpdir: + state_file = Path(tmpdir) / 'state.json' + output_file = Path(tmpdir) / 'burst_test.zip' + temp_file = output_file.with_suffix('.zip.part') + temp_file.write_bytes(b'old') + DownloadStateStore(str(state_file)).mark( + '12345678-1234-1234-1234-123456789abc', + 'failed', + output_path=str(output_file), + ) + + downloader_module.download_burst_on_demand( + burst_id='12345678-1234-1234-1234-123456789abc', + token='static_token_string', + output_dir=Path(tmpdir), + state_file=str(state_file), + resume_mode='product', + ) + + assert output_file.read_bytes() == b'freshdata' + assert mock_post.call_args_list[0].kwargs['headers']['Range'] == 'bytes=3-' + assert 'Range' not in mock_post.call_args_list[1].kwargs['headers'] @patch('phidown.downloader.requests.post') def test_download_burst_refreshes_token_on_redirect(self, mock_post): diff --git a/tests/test_viz.py b/tests/test_viz.py index 74379de..38535ac 100644 --- a/tests/test_viz.py +++ b/tests/test_viz.py @@ -1,13 +1,43 @@ -import pytest -import sys, os -sys.path.append(os.path.abspath(os.path.join(os.path.dirname(__file__), '..'))) - -from unittest.mock import patch, mock_open, MagicMock import xml.etree.ElementTree as ET -from phidown.viz import plot_kml_coordinates, plot_product_footprints +import sys +import types +from unittest.mock import MagicMock, mock_open, patch + import pandas as pd +import pytest + +if "folium" not in sys.modules: + folium = types.ModuleType("folium") + + class _DummyFoliumObject: + def __init__(self, *args, **kwargs): + self.args = args + self.kwargs = kwargs + + def add_to(self, target): + self.target = target + return self + + def save(self, path): + self.path = path + + folium.Map = _DummyFoliumObject + folium.Polygon = _DummyFoliumObject + folium.GeoJson = _DummyFoliumObject + folium.FeatureGroup = _DummyFoliumObject + folium.LayerControl = _DummyFoliumObject + sys.modules["folium"] = folium + +from phidown.viz import ( + _coverage_to_color, + _geojson_coordinate_pairs, + _normalize_footprint, + _parse_wkt_polygon, + plot_kml_coordinates, + plot_product_footprints, +) + -# Define a sample KML content SAMPLE_KML_CONTENT = """ @@ -23,13 +53,46 @@ """ -# Test successful plotting from KML -@patch('builtins.open', new_callable=mock_open, read_data=SAMPLE_KML_CONTENT) -@patch('xml.etree.ElementTree.parse') -@patch('folium.Map') -@patch('folium.Polygon') +def test_coverage_to_color_handles_none_invalid_and_clamps(): + assert _coverage_to_color(None) == "#1f77b4" + assert _coverage_to_color("bad") == "#1f77b4" + assert _coverage_to_color(-10) == "#e6003c" + assert _coverage_to_color(120) == "#00e63c" + + +def test_parse_wkt_polygon_success(): + coords = _parse_wkt_polygon("POLYGON((12.4 41.8, 12.6 41.8, 12.6 42.0, 12.4 42.0, 12.4 41.8))") + + assert coords[0] == [41.8, 12.4] + assert coords[-1] == [41.8, 12.4] + + +def test_parse_wkt_polygon_rejects_bad_coordinate_pair(): + with pytest.raises(ValueError, match="Invalid WKT coordinate pair"): + _parse_wkt_polygon("POLYGON((12.4, 12.6 41.8))") + + +def test_normalize_footprint_supports_multiple_formats_and_bad_wkt(): + geojson = {"type": "Polygon", "coordinates": [[[0.0, 1.0], [1.0, 1.0], [0.0, 1.0]]]} + + assert _normalize_footprint(geojson) == geojson + assert _normalize_footprint('{"type":"Polygon","coordinates":[[[0,1],[1,1],[0,1]]]}')["type"] == "Polygon" + assert _normalize_footprint("geography'SRID=4326;POLYGON((12.4 41.8, 12.6 41.8, 12.6 42.0, 12.4 42.0, 12.4 41.8))'")["type"] == "Polygon" + assert _normalize_footprint("POLYGON((12.4 bad, 12.6 41.8))") is None + + +def test_geojson_coordinate_pairs_flattens_supported_geometries(): + assert _geojson_coordinate_pairs({"type": "Point", "coordinates": [12.4, 41.8]}) == [(12.4, 41.8)] + assert _geojson_coordinate_pairs( + {"type": "LineString", "coordinates": [[12.4, 41.8], [12.6, 42.0]]} + ) == [(12.4, 41.8), (12.6, 42.0)] + + +@patch("builtins.open", new_callable=mock_open, read_data=SAMPLE_KML_CONTENT) +@patch("xml.etree.ElementTree.parse") +@patch("folium.Map") +@patch("folium.Polygon") def test_plot_kml_coordinates_success(mock_polygon, mock_map, mock_parse, mock_file): - # Mock the ElementTree parsing mock_root = MagicMock() mock_coord_element = MagicMock() mock_coord_element.text = " 10,20 30,40 50,60 70,80 " @@ -38,26 +101,22 @@ def test_plot_kml_coordinates_success(mock_polygon, mock_map, mock_parse, mock_f mock_tree.getroot.return_value = mock_root mock_parse.return_value = mock_tree - # Mock the folium Map and Polygon mock_map_instance = MagicMock() mock_map.return_value = mock_map_instance mock_polygon_instance = MagicMock() mock_polygon.return_value = mock_polygon_instance - # Call the function - result_map = plot_kml_coordinates('dummy.kml', output_html='test_map.html') - - # Assertions - mock_parse.assert_called_once() - mock_root.find.assert_called_once_with('.//gx:LatLonQuad/coordinates', { - "gx": "http://www.google.com/kml/ext/2.2", - "kml": "http://www.opengis.net/kml/2.2" - }) + result_map = plot_kml_coordinates("dummy.kml", output_html="test_map.html") expected_coordinates = [ - [20.0, 10.0], [40.0, 30.0], [60.0, 50.0], [80.0, 70.0], [20.0, 10.0] + [20.0, 10.0], + [40.0, 30.0], + [60.0, 50.0], + [80.0, 70.0], + [20.0, 10.0], ] + mock_parse.assert_called_once() mock_map.assert_called_once_with(location=[20.0, 10.0], zoom_start=10, tiles="CartoDB positron") mock_polygon.assert_called_once_with( locations=expected_coordinates, @@ -65,61 +124,75 @@ def test_plot_kml_coordinates_success(mock_polygon, mock_map, mock_parse, mock_f weight=2, fill=True, fill_color="black", - fill_opacity=0.2 + fill_opacity=0.2, ) mock_polygon_instance.add_to.assert_called_once_with(mock_map_instance) - mock_map_instance.save.assert_called_once_with('test_map.html') + mock_map_instance.save.assert_called_once_with("test_map.html") assert result_map == mock_map_instance -# Test KML file not found -@patch('builtins.open', side_effect=FileNotFoundError("File not found")) +@patch("builtins.open", side_effect=FileNotFoundError("File not found")) def test_plot_kml_coordinates_file_not_found(mock_file): with pytest.raises(FileNotFoundError): - plot_kml_coordinates('nonexistent.kml') + plot_kml_coordinates("nonexistent.kml") -# Test KML parsing error (e.g., invalid XML) -@patch('builtins.open', new_callable=mock_open, read_data="") -@patch('xml.etree.ElementTree.parse', side_effect=ET.ParseError("Invalid XML")) +@patch("builtins.open", new_callable=mock_open, read_data="") +@patch("xml.etree.ElementTree.parse", side_effect=ET.ParseError("Invalid XML")) def test_plot_kml_coordinates_parse_error(mock_parse, mock_file): with pytest.raises(ET.ParseError): - plot_kml_coordinates('invalid.kml') + plot_kml_coordinates("invalid.kml") -# Test KML missing coordinates tag -@patch('builtins.open', new_callable=mock_open, - read_data='') -@patch('xml.etree.ElementTree.parse') +@patch( + "builtins.open", + new_callable=mock_open, + read_data='', +) +@patch("xml.etree.ElementTree.parse") def test_plot_kml_coordinates_missing_coords(mock_parse, mock_file): - # Mock the ElementTree parsing to return None for find mock_root = MagicMock() mock_root.find.return_value = None mock_tree = MagicMock() mock_tree.getroot.return_value = mock_root mock_parse.return_value = mock_tree - with pytest.raises(AttributeError): # Add spaces before inline comment - plot_kml_coordinates('missing_coords.kml') + with pytest.raises(ValueError, match="coordinates data"): + plot_kml_coordinates("missing_coords.kml") -@patch('folium.Map') -@patch('folium.Polygon') -@patch('folium.GeoJson') -def test_plot_product_footprints_geography_wkt(mock_geojson, mock_polygon, mock_map): +@patch("builtins.open", new_callable=mock_open, read_data=SAMPLE_KML_CONTENT) +@patch("xml.etree.ElementTree.parse") +def test_plot_kml_coordinates_rejects_too_few_coordinates(mock_parse, mock_file): + mock_root = MagicMock() + mock_coord_element = MagicMock() + mock_coord_element.text = "10,20 30,40" + mock_root.find.return_value = mock_coord_element + mock_tree = MagicMock() + mock_tree.getroot.return_value = mock_root + mock_parse.return_value = mock_tree + + with pytest.raises(ValueError, match="at least three"): + plot_kml_coordinates("too_few.kml") + + +@patch("folium.Map") +@patch("folium.GeoJson") +def test_plot_product_footprints_geography_wkt(mock_geojson, mock_map): mock_map_instance = MagicMock() mock_map.return_value = mock_map_instance mock_geojson.return_value = MagicMock() - mock_polygon.return_value = MagicMock() - df = pd.DataFrame([ - { - "Id": "x1", - "Name": "burst-1", - "coverage": 10.5, - "Footprint": "geography'SRID=4326;POLYGON((12.4 41.8, 12.6 41.8, 12.6 42.0, 12.4 42.0, 12.4 41.8))'", - } - ]) + df = pd.DataFrame( + [ + { + "Id": "x1", + "Name": "burst-1", + "coverage": 10.5, + "Footprint": "geography'SRID=4326;POLYGON((12.4 41.8, 12.6 41.8, 12.6 42.0, 12.4 42.0, 12.4 41.8))'", + } + ] + ) m = plot_product_footprints( df=df, @@ -129,14 +202,60 @@ def test_plot_product_footprints_geography_wkt(mock_geojson, mock_polygon, mock_ assert m == mock_map_instance mock_map.assert_called_once() - mock_polygon.assert_called_once() - mock_geojson.assert_called_once() - kwargs = mock_geojson.call_args.kwargs + assert mock_geojson.call_count == 2 + kwargs = mock_geojson.call_args_list[-1].kwargs assert "AOI coverage" in kwargs["tooltip"] assert "10.50%" in kwargs["tooltip"] assert "popup" in kwargs +@patch("folium.Map") +@patch("folium.LayerControl") +@patch("folium.GeoJson") +def test_plot_product_footprints_accepts_point_aoi(mock_geojson, mock_layer_control, mock_map): + mock_map_instance = MagicMock() + mock_map.return_value = mock_map_instance + mock_geojson.return_value = MagicMock() + + df = pd.DataFrame( + [ + { + "Id": "x1", + "Name": "burst-1", + "coverage": 10.5, + "Footprint": "geography'SRID=4326;POLYGON((12.4 41.8, 12.6 41.8, 12.6 42.0, 12.4 42.0, 12.4 41.8))'", + } + ] + ) + + result = plot_product_footprints(df=df, aoi_wkt="POINT(12.4 41.8)", top_n=10) + + assert result == mock_map_instance + mock_map.assert_called_once_with(location=[41.8, 12.4], zoom_start=9, tiles="CartoDB positron") + assert mock_geojson.call_count == 2 + mock_layer_control.assert_called_once() + + +@patch("folium.Map") +@patch("folium.LayerControl") +@patch("folium.GeoJson") +def test_plot_product_footprints_skips_invalid_footprints(mock_geojson, mock_layer_control, mock_map): + mock_map_instance = MagicMock() + 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