Skip to content

Commit 8369b0f

Browse files
committed
Version 0.1.0
1 parent 63553cb commit 8369b0f

5 files changed

Lines changed: 28 additions & 3 deletions

File tree

CHANGELOG.md

Lines changed: 5 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -0,0 +1,5 @@
1+
## Changelog
2+
3+
# 0.1.0 - 2021-11-19
4+
5+
First beta release

README.md

Lines changed: 18 additions & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -6,6 +6,24 @@ A command-line tool for various common Ig-Seq tasks. These are heavily biased
66
toward the peculiarities of our protocol and for rhesus macaque antibody
77
sequences. Your mileage may vary.
88

9+
## Install
10+
11+
Install [Miniconda](https://docs.conda.io/en/latest/miniconda.html)
12+
13+
Install from the latest version via <https://anaconda.org/ShawHahnLab/igseq>:
14+
15+
conda create --name igseq -c conda-forge -c bioconda -c ShawHahnLab igseq
16+
17+
Or, install from the latest source here:
18+
19+
git clone https://github.com/ShawHahnLab/igseq.git
20+
cd igseq
21+
conda env update --file igseq/data/environment.yml
22+
conda activate igseq
23+
pip install .
24+
25+
## Some Instructions
26+
927
The `igseq` command is organized into subcommands, grouped into two
1028
categories: early read processing tasks (demultiplex, trim, merge, etc.), and
1129
various convenience tools (IgBLAST this against that, what database has the

conda/meta.yaml

Lines changed: 3 additions & 2 deletions
Original file line numberDiff line numberDiff line change
@@ -1,5 +1,6 @@
11
# https://docs.conda.io/projects/conda-build/en/latest/resources/define-metadata.html
2-
{% set version = "0.0.1" %}
2+
{% set version = "0.1.0" %}
3+
{% set build = "0" %}
34

45
package:
56
name: igseq
@@ -15,7 +16,7 @@ source:
1516
git_depth: 1
1617

1718
build:
18-
number: 1
19+
number: {{ build }}
1920
script: {{ PYTHON }} -m pip install . --no-deps --ignore-installed --no-cache-dir -vvv
2021

2122
requirements:

igseq/version.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -4,4 +4,4 @@
44
See https://www.python.org/dev/peps/pep-0396/
55
"""
66

7-
__version__ = "0.0.1"
7+
__version__ = "0.1.0"

tools/prep-release.sh

Lines changed: 1 addition & 0 deletions
Original file line numberDiff line numberDiff line change
@@ -3,6 +3,7 @@
33
version=$(python -c 'from igseq.version import __version__; print(__version__)')
44
date=$(date +%Y-%m-%d)
55
echo Version: $version
6+
echo
67
sed -i 's/{% set version = ".*" %}/{% set version = "'$version'" %}'/ conda/meta.yaml
78
sed -i "s/# dev$/# $version - $date/" CHANGELOG.md
89
echo conda/meta.yaml vs igseq/data/environment.yml:

0 commit comments

Comments
 (0)