medic-ai/pyproject.toml at main · innat/medic-ai · GitHub

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[project]
name = "medicai"
dynamic = ["version"]
description = "Keras-based medical 2D and 3D image analysis library."
readme = "README.md"
requires-python = ">=3.10"
license = { text = "Apache-2.0" }
authors = [
  { name = "innat", email = "innat.dev@gmail.com" }
]
keywords = ["medical-imaging", "keras", "deep-learning", "segmentation", "classification"]
classifiers = [
  "Development Status :: 3 - Alpha",
  "Intended Audience :: Developers",
  "Intended Audience :: Science/Research",
  "License :: OSI Approved :: Apache Software License",
  "Operating System :: OS Independent",
  "Programming Language :: Python :: 3",
  "Programming Language :: Python :: 3.10",
  "Programming Language :: Python :: 3.11",
  "Programming Language :: Python :: 3.12",
  "Programming Language :: Python :: 3.13",
  "Topic :: Scientific/Engineering :: Artificial Intelligence",
  "Topic :: Scientific/Engineering :: Medical Science Apps.",
]
dependencies = [
  "keras",
  "matplotlib",
  "nibabel",
  "numpy",
  "omegaconf",
  "pandas",
  "PyYAML",
  "requests",
  "rich",
  "scipy",
  "tqdm",
  "typeguard",
  "typing_extensions",
  "tzdata",
  "urllib3",
]

[project.optional-dependencies]
docs = [
  "myst-parser>=2.0",
  "pydata-sphinx-theme>=0.15",
  "sphinx>=7.0",
  "sphinx-autobuild>=2024.10.3",
  "sphinx-copybutton>=0.5",
  "sphinx-design>=0.5",
  "sphinx-notfound-page>=1.0",
]
test = [
  "pytest",
]
dev = [
  "black",
  "flake8",
  "isort",
  "myst-parser>=2.0",
  "pydata-sphinx-theme>=0.15",
  "pytest",
  "sphinx>=7.0",
  "sphinx-autobuild>=2024.10.3",
  "sphinx-copybutton>=0.5",
  "sphinx-design>=0.5",
  "sphinx-notfound-page>=1.0",
]
tensorflow = [
  "tensorflow",
]
jax = [
  "jax",
]
torch = [
  "torch",
]
all = [
  "tensorflow",
  "jax",
  "torch",
]

[project.urls]
Homepage = "https://github.com/innat/medic-ai"
Documentation = "https://medicai.readthedocs.io/"
Repository = "https://github.com/innat/medic-ai"
Issues = "https://github.com/innat/medic-ai/issues"

# Black formatting
[tool.black]
line-length = 100
target-version = ["py310", "py311", "py312", "py313"]
include = '\.pyi?$'
exclude = '''
/(
      .eggs         # exclude a few common directories in the
    | .git          # root of the project
    | .hg
    | .mypy_cache
    | .tox
    | venv
    | _build
    | buck-out
    | build
    | dist
  )/
'''

# iSort
[tool.isort]
profile = "black"
line_length = 100
multi_line_output = 3
include_trailing_comma = true
virtual_env = "venv"


[tool.flake8]
exclude = "venv"
ignore = ["E501", "W503", "E226"]

[tool.setuptools.dynamic]
version = { attr = "medicai.__version__" }

[tool.setuptools.packages.find]
where = ["."]
include = ["medicai", "medicai.*"]
exclude = ["test", "dataloader", "notebooks"]

[build-system]
requires = ["setuptools>=69", "wheel"]
build-backend = "setuptools.build_meta"