setup.tex

% LAYOUT

\usepackage[T1]{fontenc}
\usepackage{helvet} % Get Helvetica font
\renewcommand{\familydefault}{\sfdefault} % Set Helvetica font
\usepackage{babel}
% For the digital-version
\usepackage[left=2.5cm, right=2.5cm, top=2.5cm, bottom=2cm]{geometry}
% For the print-version account for lost material in the binding or spine
% \usepackage[left=3cm, right=2cm, top=2.5cm, bottom=2cm]{geometry}
\usepackage[skip=8mm]{parskip} % 8 mm between paragraphs
\usepackage[onehalfspacing]{setspace} % onehalfspacing = line spacing of 1.5
% The following three commands should reduce overfull hbox warnings and weird looking spacing.
\usepackage[
    final,
    nopatch=footnote,
    activate={true, nocompatibility},
    protrusion=true,
    expansion=true,
    tracking=true,
    kerning=true
]{microtype}
\microtypecontext{spacing=nonfrench}
\sloppy

% UTILITIES

\usepackage{amsmath, amsthm, amsfonts, mathtools}
\usepackage{siunitx}
\usepackage{hyperref}
\usepackage[all]{hypcap} % to show the full figure when clicking on it's reference
\usepackage[dvipsnames]{xcolor}
\usepackage{graphicx}
\usepackage[labelfont=bf, labelsep=colon, format=hang]{caption} % Make image captions nicer
\usepackage{booktabs} % nicer tables
\usepackage{listings} % to include code
\renewcommand{\lstlistingname}{Algorithm}
\lstset{keywordstyle=\bfseries}
\lstset{commentstyle=\color{cd_blue}\bfseries}
\usepackage[section]{placeins}  % To keep all figures inside there section
\usepackage[stylemods=longextra, symbols, automake]{glossaries-extra}
\usepackage{pdfpages} % to include PDFs
\usepackage[nottoc]{tocbibind}  % Add References and others to the table of contents
\usepackage{orcidlink}  % ORCID is an unique identifier for scientists
% Remove the next two lines for the final version without ToDos
\usepackage[colorinlistoftodos]{todonotes}
\setlength{\marginparwidth}{2cm} % make space for the ToDos

% Colors from Corporate Design Uni Freiburg

\definecolor{cd_blue}{HTML}{344A9A}
\definecolor{cd_black}{HTML}{000000}
\definecolor{cd_white}{HTML}{FFFFFF}

\definecolor{cd_background_blue_100_percent}{HTML}{344A9A}
\definecolor{cd_background_blue_80_percent}{HTML}{5D6BAD}
\definecolor{cd_background_blue_60_percent}{HTML}{868DC2}
\definecolor{cd_background_blue_40_percent}{HTML}{AFB1D8}
\definecolor{cd_background_blue_20_percent}{HTML}{D7D8EC}
\definecolor{cd_background_dark_blue}{HTML}{00004a}
\definecolor{cd_background_sand_100_percent}{HTML}{f6f1e3}
\definecolor{cd_background_sand_50_percent}{HTML}{faf8f1}

\definecolor{cd_additional_green_100_percent}{HTML}{00a082}
\definecolor{cd_additional_green_80_percent}{HTML}{27b29b}
\definecolor{cd_additional_green_60_percent}{HTML}{7bc6b4}
\definecolor{cd_additional_green_40_percent}{HTML}{afdace}
\definecolor{cd_additional_green_20_percent}{HTML}{daede7}
\definecolor{cd_additional_brown_100_percent}{HTML}{8f6b30}
\definecolor{cd_additional_brown_80_percent}{HTML}{a58959}
\definecolor{cd_additional_brown_60_percent}{HTML}{bca683}
\definecolor{cd_additional_brown_40_percent}{HTML}{d2c4ac}
\definecolor{cd_additional_brown_20_percent}{HTML}{e9e1d6}
\definecolor{cd_additional_yellow_100_percent}{HTML}{ffe863}
\definecolor{cd_additional_yellow_80_percent}{HTML}{ffed82}
\definecolor{cd_additional_yellow_60_percent}{HTML}{fff1a1}
\definecolor{cd_additional_yellow_40_percent}{HTML}{fff6c1}
\definecolor{cd_additional_yellow_20_percent}{HTML}{fffae0}
\definecolor{cd_additional_pink_100_percent}{HTML}{f5c2ed}
\definecolor{cd_additional_pink_80_percent}{HTML}{f7cef1}
\definecolor{cd_additional_pink_60_percent}{HTML}{f9daf4}
\definecolor{cd_additional_pink_40_percent}{HTML}{fbe7f8}
\definecolor{cd_additional_pink_20_percent}{HTML}{fdf3fb}