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FROM debian:bullseye
SHELL ["/bin/bash", "-c"]
USER root
RUN apt-get update -y && \
apt-get install --no-install-recommends -y \
make \
build-essential \
libssl-dev \
zlib1g-dev \
libbz2-dev \
libreadline-dev \
libsqlite3-dev \
wget \
curl \
llvm \
libncurses5-dev \
xz-utils \
tk-dev \
libxml2-dev \
libxmlsec1-dev \
libffi-dev \
liblzma-dev \
g++ && \
apt-get install -y \
git && \
apt-get -y clean && \
apt-get -y autoremove && \
rm -rf /var/lib/apt/lists/*
# Create non-root user "docker"
# Set shell to Bash to give tab complete
RUN useradd --shell /bin/bash -m docker && \
cp /root/.bashrc /home/docker/ && \
cp /root/.profile /home/docker/ && \
mkdir /home/docker/data && \
chown -R --from=root docker /home/docker
USER docker
ENV HOME /home/docker
WORKDIR /home/docker
# Install pyenv and pyenv-virtualenv
ENV PYENV_RELEASE_VERSION=2.3.12
RUN git clone --depth 1 https://github.com/pyenv/pyenv.git \
--branch "v${PYENV_RELEASE_VERSION}" \
--single-branch \
~/.pyenv && \
pushd ~/.pyenv && \
src/configure && \
make -C src && \
popd && \
sed -i '/^# ~.*/a export PYENV_ROOT="${HOME}/.pyenv"' ~/.profile && \
sed -i '/^export.*/a export PATH="${PYENV_ROOT}/bin:${PATH}"' ~/.profile && \
sed -i '/^export PATH.*/a \\n# Place pyenv shims on path\nif [[ ":${PATH}:" != *":$(pyenv root)/shims:"* ]]; then\n eval "$(pyenv init --path)"\nfi' ~/.profile && \
printf '\neval "$(pyenv init -)"\n' >> ~/.bashrc && \
. ~/.profile && \
git clone --depth 1 https://github.com/pyenv/pyenv-virtualenv.git $(pyenv root)/plugins/pyenv-virtualenv && \
printf '\n# Place pyenv-virtualenv shims on path\nif [[ ":${PATH}:" != *":$(pyenv root)/plugins/pyenv-virtualenv/shims:"* ]]; then\n eval "$(pyenv virtualenv-init -)"\nfi\n' >> ~/.profile && \
printf '\n# Place pyenv shims on path\nif [[ ":${PATH}:" != *":$(pyenv root)/shims:"* ]]; then\n eval "$(pyenv init --path)"\nfi\n' >> ~/.bashrc && \
printf '# Place pyenv-virtualenv shims on path\nif [[ ":${PATH}:" != *":$(pyenv root)/plugins/pyenv-virtualenv/shims:"* ]]; then\n eval "$(pyenv virtualenv-init -)"\nfi\n' >> ~/.bashrc && \
cp ~/.profile ~/.bash_profile && \
sed -i 's/.profile/.bash_profile/' ~/.bash_profile
# Need to setup shell variables in .bash_profile to use pyenv
# Install Python 3.11, miniconda, and create virtual environments in both
# c.f. https://stackoverflow.com/a/58045893/8931942
ENV PYTHON_VERSION=3.11.1
ENV CONDA_VERSION miniconda3-latest
RUN . "${HOME}/.bash_profile" && \
echo "Install Python ${PYTHON_VERSION}" && \
pyenv install "${PYTHON_VERSION}" && \
pyenv virtualenv "${PYTHON_VERSION}" base && \
pyenv activate base && \
python -m pip --no-cache-dir install --upgrade pip setuptools wheel && \
pyenv deactivate && \
echo "Install miniconda" && \
pyenv install "${CONDA_VERSION}" && \
pyenv shell "${CONDA_VERSION}" && \
conda init && \
conda config --set auto_activate_base false && \
pyenv virtualenv "${CONDA_VERSION}" miniconda3-base && \
pyenv activate miniconda3-base && \
python -m pip --no-cache-dir install --upgrade pip setuptools wheel
WORKDIR /home/docker/data
ENTRYPOINT ["/bin/bash", "-l", "-c"]
CMD ["/bin/bash"]