Description of the bug
I try to run with simpleaf aligner but error in NFCORE_SCRNASEQ:SCRNASEQ:SIMPLEAF:ALEVINQC step checkAlevinFryInputFiles error ::
Command error: Loading required package: alevinQC Registered S3 method overwritten by 'GGally': method from +.gg ggplot2 Error in checkAlevinFryInputFiles(mapDir = mapDir, permitDir = permitDir, : Input directory not compatible with alevin-fry with the piscem mapper v0.6.0 or newer, the following required file(s) are missing or malformed: quant_dir/featureDump.txt quant_dir/quant.json
I have checked in directory have these files quant_dir/featureDump.txt and quant_dir/quant.json
Thank you,
Command used and terminal output
Relevant files
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System information
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Description of the bug
I try to run with simpleaf aligner but error in NFCORE_SCRNASEQ:SCRNASEQ:SIMPLEAF:ALEVINQC step checkAlevinFryInputFiles error ::
Command error: Loading required package: alevinQC Registered S3 method overwritten by 'GGally': method from +.gg ggplot2 Error in checkAlevinFryInputFiles(mapDir = mapDir, permitDir = permitDir, : Input directory not compatible with alevin-fry with the piscem mapper v0.6.0 or newer, the following required file(s) are missing or malformed: quant_dir/featureDump.txt quant_dir/quant.jsonI have checked in directory have these files quant_dir/featureDump.txt and quant_dir/quant.json
Thank you,
Command used and terminal output
Relevant files
No response
System information
No response