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    1.5k repositories

    • terraform-google-redirect

      Public
      Terraform module to create HTTP redirects using GCP components
      HCL
      •0•0•0•1•Updated May 4, 2026May 4, 2026

    • juniper

      Public
      Java
      •
      BSD 3-Clause "New" or "Revised" License
      •5•9•0•16•Updated May 4, 2026May 4, 2026

    • BE3D

      Public
      BE3D public repository
      Python
      •
      MIT License
      •0•1•2•0•Updated May 4, 2026May 4, 2026

    • haplograph

      Public
      WDL
      •
      MIT License
      •0•3•0•1•Updated May 4, 2026May 4, 2026

    • data-registry-api

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•1•0•2•Updated May 4, 2026May 4, 2026

    • backstage

      Public
      Broad Institute Engineering Portal is an Internal Developer Platform (Spotify Backstage by another name)
      TypeScript
      •0•2•0•2•Updated May 4, 2026May 4, 2026

    • taiga

      Public
      Taiga for Dataset management
      Python
      •1•12•0•0•Updated May 4, 2026May 4, 2026

    • taigapy

      Public
      Library for reading from taiga in python
      Python
      •1•1•2•3•Updated May 4, 2026May 4, 2026

    • protigy-v2

      Public
      ProTIGY - Proteogenomics Toolset for Integrative Data Analysis
      R
      •
      BSD 3-Clause "New" or "Revised" License
      •0•5•5•2•Updated May 4, 2026May 4, 2026

    • cromwell

      Public
      Scientific workflow engine designed for simplicity & scalability. Trivially transition between one off use cases to massive scale production environments
      dockerapplicationworkflow
      dockerapplicationworkflowcloudbioinformaticsscalaexecutorhpccontainerswdl
      Scala
      •
      BSD 3-Clause "New" or "Revised" License
      •381•1.1k•764•49•Updated May 4, 2026May 4, 2026

    • gatk-sv

      Public
      A structural variation pipeline for short-read sequencing
      bioinformaticsgenomicsstructural-variation
      bioinformaticsgenomicsstructural-variationstructural-variants
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •76•202•98•32•Updated May 4, 2026May 4, 2026

    • depmap-portal

      Public
      Code for the DepMap portal at depmap.org
      TypeScript
      •
      BSD 2-Clause "Simplified" License
      •2•8•1•2•Updated May 4, 2026May 4, 2026

    • orsp-pub

      Public
      Public ORSP Compliance Portal
      JavaScript
      •
      BSD 3-Clause "New" or "Revised" License
      •0•3•0•25•Updated May 4, 2026May 4, 2026

    • TAG-public

      Public
      Official workflows published by the Broad Institute's Genomics Platform Translation Analysis Group (TAG)
      WDL
      •3•5•1•17•Updated May 4, 2026May 4, 2026

    • gene-lookup

      Public
      Website displaying aggregated info about gene-disease relationships @ genelookup.broadinstitute.org
      HTML
      •
      MIT License
      •0•0•0•0•Updated May 4, 2026May 4, 2026

    • sherlock

      Public
      DSP DevOps's deployment source-of-truth service
      golangpostgresgorm
      golangpostgresgorm
      Go
      •
      BSD 3-Clause "New" or "Revised" License
      •0•1•0•27•Updated May 4, 2026May 4, 2026

    • Drop-seq

      Public
      Java tools for analyzing Drop-seq data
      Jupyter Notebook
      •
      MIT License
      •35•136•11•1•Updated May 4, 2026May 4, 2026

    • warp

      Public
      Warp Analysis Research Pipelines
      WDL
      •
      BSD 3-Clause "New" or "Revised" License
      •115•225•7•23•Updated May 3, 2026May 3, 2026

    • ml4h

      Public
      Python
      •
      GNU General Public License v3.0
      •27•170•33•29•Updated May 3, 2026May 3, 2026

    • fgx

      Public
      FinnGen eXplore - agent-composable marimo notebooks against FinnGenie's REST API
      gwasgeneticsbroad-institute
      gwasgeneticsbroad-institutefinngenmarimoagents-for-science
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •0•0•0•0•Updated May 3, 2026May 3, 2026

    • jx

      Public
      JUMP eXplore — skill library and marimo notebook catalog for working with JUMP Cell Painting data
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •2•3•1•1•Updated May 2, 2026May 2, 2026

    • beehive

      Public
      Beehive is a web UI for interacting with Sherlock, DSP DevOps's deployment source-of-truth service
      reacttypescriptremix
      reacttypescriptremixtailwindcss
      TypeScript
      •
      BSD 3-Clause "New" or "Revised" License
      •1•3•0•21•Updated May 2, 2026May 2, 2026

    • poolq

      Public
      The Genetic Perturbation Platform's tool for deconvoluting and quantifying the results of pooled screens
      Scala
      •
      Other
      •1•5•8•1•Updated May 2, 2026May 2, 2026

    • OPS_NewAnalysis

      Public
      analysis workflow for OPS
      Python
      •1•0•0•0•Updated May 2, 2026May 2, 2026

    • terraform-broad-redirect

      Public
      Terraform configuration for the broad-redirect projects
      HCL
      •0•0•0•1•Updated May 1, 2026May 1, 2026

    • gnomad-browser

      Public
      Explore gnomAD datasets on the web
      javascriptgenomicsgnomad
      javascriptgenomicsgnomad
      TypeScript
      •
      MIT License
      •50•88•169•17•Updated May 1, 2026May 1, 2026

    • python-sudoers

      Public
      Python library for parsing a Linux sudoers file
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •8•7•1•1•Updated May 1, 2026May 1, 2026

    • seqr

      Public
      web-based analysis tool for rare disease genomics
      Python
      •
      GNU Affero General Public License v3.0
      •94•204•48•9•Updated May 1, 2026May 1, 2026

    • gnomad-deployments

      Public
      kustomizations for current gnomad project kubernetes deployments
      Makefile
      •1•1•0•5•Updated May 1, 2026May 1, 2026

    • palantir-workflows

      Public
      Utility workflows for the DSP hydro.gen team (formerly palantir)
      WDL
      •
      BSD 3-Clause "New" or "Revised" License
      •13•28•4•1•Updated May 1, 2026May 1, 2026
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