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@hlilab Heng Li lab

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    37 repositories

    • hlilab.github.io

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      Other
      •1•16•0•0•Updated Aug 29, 2026Aug 29, 2026

    • T1K

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      C
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      MIT License
      •15•1•0•0•Updated Aug 18, 2026Aug 18, 2026

    • savont

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      Rust
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      MIT License
      •4•0•0•0•Updated Aug 18, 2026Aug 18, 2026

    • minisv.py

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      Python
      •1•1•0•0•Updated Aug 12, 2026Aug 12, 2026

    • minibwa

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      C
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      Other
      •20•2•0•0•Updated Aug 10, 2026Aug 10, 2026

    • myloasm

      Public
      A new high-resolution long-read metagenome assembler for even noisy reads
      Rust
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      MIT License
      •8•0•0•0•Updated Jul 2, 2026Jul 2, 2026

    • breakinator

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      Rust
      •3•0•0•0•Updated Jul 1, 2026Jul 1, 2026

    • longcallD

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      C
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      MIT License
      •7•1•0•0•Updated Jun 25, 2026Jun 25, 2026

    • Quaak

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      Python
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      MIT License
      •1•1•0•0•Updated Jun 8, 2026Jun 8, 2026

    • minimap2

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      C
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      Other
      •475•0•0•0•Updated May 20, 2026May 20, 2026

    • FuFiHLA

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      Python
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      MIT License
      •2•3•0•0•Updated May 8, 2026May 8, 2026

    • chromap

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      C++
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      MIT License
      •30•0•0•0•Updated Jan 18, 2026Jan 18, 2026

    • ropebwt3

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      C
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      Other
      •9•0•0•0•Updated Jan 14, 2026Jan 14, 2026

    • miniprot

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      C
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      MIT License
      •25•0•0•0•Updated Jan 5, 2026Jan 5, 2026

    • yak

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      C
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      MIT License
      •13•0•0•0•Updated Dec 30, 2025Dec 30, 2025

    • gfatools

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      C
      •25•0•0•0•Updated Dec 17, 2025Dec 17, 2025

    • longdust

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      C
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      MIT License
      •6•2•0•1•Updated Nov 24, 2025Nov 24, 2025

    • hifiasm-meta

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      C++
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      MIT License
      •125•0•0•0•Updated Nov 24, 2025Nov 24, 2025

    • minisplice

      Public
      Scoring GT/AG sites for improving spliced alignment
      C
      •3•0•0•0•Updated Nov 11, 2025Nov 11, 2025

    • minisv

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      JavaScript
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      MIT License
      •4•2•0•0•Updated Oct 27, 2025Oct 27, 2025

    • bwa-mem2

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      C++
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      Other
      •134•1•0•0•Updated Oct 15, 2025Oct 15, 2025

    • bedtk

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      C
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      MIT License
      •21•1•0•0•Updated Aug 25, 2025Aug 25, 2025

    • pangene

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      C
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      MIT License
      •14•0•0•0•Updated Aug 12, 2025Aug 12, 2025

    • minigraph

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      C
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      MIT License
      •43•0•0•0•Updated Aug 11, 2025Aug 11, 2025

    • minigff

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      JavaScript
      •1•0•0•0•Updated Jul 22, 2025Jul 22, 2025

    • minipileup

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      C
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      MIT License
      •10•0•0•0•Updated Apr 24, 2025Apr 24, 2025

    • .github

      Public
      0•0•0•0•Updated Mar 24, 2025Mar 24, 2025

    • hifiasm

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      C++
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      MIT License
      •125•0•0•0•Updated Mar 18, 2025Mar 18, 2025

    • Immuannot

      Public
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      Python
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      MIT License
      •6•1•0•0•Updated Mar 13, 2025Mar 13, 2025

    • ntsm

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      C++
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      MIT License
      •1•3•0•0•Updated Nov 25, 2024Nov 25, 2024
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