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    145 repositories

    • barena

      Public
      Nim
      •0•1•0•0•Updated May 3, 2026May 3, 2026

    • kraut

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Apr 29, 2026Apr 29, 2026

    • NBI-Slurm

      Public
      Simple and Eco interface to slurm
      hpcperlslurm
      hpcperlslurmenergy-efficiency
      Perl
      •
      MIT License
      •0•2•0•0•Updated Apr 24, 2026Apr 24, 2026

    • seqfu2-dev

      Public
      Nim
      •0•0•0•0•Updated Apr 22, 2026Apr 22, 2026

    • hostzap

      Public
      Host removal
      Nextflow
      •
      MIT License
      •0•0•0•0•Updated Apr 16, 2026Apr 16, 2026

    • nf-samestr

      Public
      Nextflow
      •0•1•0•0•Updated Apr 10, 2026Apr 10, 2026

    • quadram-institute-bioscience.github.io

      Public
      Core Bioinformatics public page
      SCSS
      •
      MIT License
      •914•0•0•0•Updated Apr 1, 2026Apr 1, 2026

    • irida-plugin-qi-taxon

      Public
      Java
      •
      Apache License 2.0
      •0•1•1•1•Updated Mar 27, 2026Mar 27, 2026

    • irida-plugin-qi-typing

      Public
      Java
      •
      Apache License 2.0
      •0•1•0•1•Updated Mar 27, 2026Mar 27, 2026

    • irida-plugin-qi-phylo

      Public
      HTML
      •
      Apache License 2.0
      •0•1•1•1•Updated Mar 27, 2026Mar 27, 2026

    • mini-prep

      Public
      Nextflow
      •0•1•0•0•Updated Mar 23, 2026Mar 23, 2026

    • nf-core-modules

      Public
      Repository to host tool-specific module files for the Nextflow DSL2 community!
      Nextflow
      •
      MIT License
      •1k•0•0•0•Updated Mar 19, 2026Mar 19, 2026

    • gmh-metafun

      Public
      Functional analysis of metagenome datasets
      Python
      •
      MIT License
      •1•0•0•0•Updated Mar 13, 2026Mar 13, 2026

    • readfx

      Public
      SeqFu FASTX parser (klib)
      Nim
      •
      MIT License
      •3•0•0•0•Updated Mar 10, 2026Mar 10, 2026

    • QuaTradis

      Public
      A pipeline to analyse transposon directed insertion-site sequencing
      Gnuplot
      •
      GNU General Public License v3.0
      •1•3•0•0•Updated Mar 9, 2026Mar 9, 2026

    • dada2

      Public
      Accurate sample inference from amplicon data with single nucleotide resolution
      R
      •
      GNU Lesser General Public License v3.0
      •168•0•0•0•Updated Feb 24, 2026Feb 24, 2026

    • dsrclib

      Public
      C++
      •0•0•0•0•Updated Feb 23, 2026Feb 23, 2026

    • biocondor

      Public
      🦅 Retrieve, cache and search for bioconda packages and their descriptions
      Python
      •
      MIT License
      •1•0•0•0•Updated Feb 18, 2026Feb 18, 2026

    • FuncDarkMatt

      Public
      Functional Dark Matter
      Python
      •0•0•0•0•Updated Feb 17, 2026Feb 17, 2026

    • glycoanalysis

      Public
      Python
      •0•1•0•0•Updated Feb 11, 2026Feb 11, 2026

    • ai-training

      Public
      GenAI training
      Creative Commons Zero v1.0 Universal
      •0•0•0•0•Updated Feb 6, 2026Feb 6, 2026

    • nbi-hpc

      Public
      SCSS
      •
      MIT License
      •0•0•1•0•Updated Jan 23, 2026Jan 23, 2026

    • datasciencegroup

      Public
      Scripts and docs from the datascienceatqib group
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •0•5•0•0•Updated Jan 21, 2026Jan 21, 2026

    • ARG-Sniper

      Public
      Benchmarking of AMR detection tools using shot-gun metagenomic datasets
      Python
      •
      Apache License 2.0
      •2•0•1•0•Updated Dec 16, 2025Dec 16, 2025

    • CoreSeq-samplesheet-validator

      Public
      Svelte
      •
      MIT License
      •0•0•0•1•Updated Dec 2, 2025Dec 2, 2025

    • metagenomics-workshop

      Public
      SCSS
      •
      MIT License
      •0•0•0•0•Updated Nov 28, 2025Nov 28, 2025

    • qimu

      Public
      Python
      •0•0•0•0•Updated Nov 27, 2025Nov 27, 2025

    • votuderep

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 31, 2025Oct 31, 2025

    • nim-abif

      Public
      parser for ABIF chromatograms for Nim projects
      Nim
      •
      MIT License
      •0•3•0•0•Updated Oct 26, 2025Oct 26, 2025

    • nf-ebame-virome

      Public
      Nextflow
      •0•1•0•0•Updated Oct 23, 2025Oct 23, 2025
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