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v5.4.0

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@ACEnglish ACEnglish released this 07 Oct 14:51
· 7 commits to develop since this release
v5.4.0
859ffc4
  • Added stratp command for automated benchmark performance evaluation across stratifications.
  • Improved performance: lazy imports for faster startup and cached allele frequency annotations in VariantRecord.
  • Enhanced collapse:
    • --sizemax -1 now supports all large SVs.
    • New --fast-cluster option greatly speeds up processing of large (>100 kbp) SVs.
  • bwapy is now optional by default (simplifies macOS setup).
  • vcf2df --parquet outputs stable, cross-environment Parquet files.
  • Various bug fixes and stability improvements

Full Changelog: v5.3.0...v5.4.0

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