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@dweindl dweindl commented Nov 20, 2025

Don't symlink python/sdist/amici/include/, as done so far. Instead, symlink python/sdist/amici/include/amici. This prevents editable installations messing up include/. For example, after an editable installation with scipy-openblas, the plain c++ build would fail because of a cblas.h added to include/.

Don't symlink `python/sdist/amici/include/`, as done so far.
Instead, symlink `python/sdist/amici/include/amici`.
This prevents editable installations messing up `include/`.
For example, after an editable installation with scipy-openblas,
the plain c++ build would fail because of a `cblas.h` added to `include/`.
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codecov bot commented Nov 20, 2025

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 77.52%. Comparing base (63f2e78) to head (aa9fcea).

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@@            Coverage Diff             @@
##             main    #3066      +/-   ##
==========================================
- Coverage   78.16%   77.52%   -0.64%     
==========================================
  Files         313      313              
  Lines       20656    20656              
  Branches     1500     1499       -1     
==========================================
- Hits        16145    16014     -131     
- Misses       4502     4633     +131     
  Partials        9        9              
Flag Coverage Δ
cpp 71.62% <ø> (+0.01%) ⬆️
cpp_python 37.26% <ø> (+<0.01%) ⬆️
petab 45.88% <ø> (+0.01%) ⬆️
petab_sciml 13.82% <ø> (ø)
python 70.26% <ø> (+0.05%) ⬆️
sbmlsuite-jax ?

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@dweindl dweindl marked this pull request as ready for review November 20, 2025 14:35
@dweindl dweindl requested a review from a team as a code owner November 20, 2025 14:35
@dweindl dweindl enabled auto-merge November 20, 2025 14:35
@dweindl dweindl self-assigned this Nov 20, 2025
@dweindl dweindl added this pull request to the merge queue Nov 20, 2025
Merged via the queue into AMICI-dev:main with commit f0d4681 Nov 20, 2025
25 of 26 checks passed
@dweindl dweindl deleted the fix_include branch November 20, 2025 20:20
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2 participants