Fix regeneration of expected results hdf5

[dweindl]

• Restore deleted data file
• Update to changed locations and names

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 77.10%. Comparing base (af76f17) to head (e54067a).
⚠️ Report is 1 commits behind head on main.

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #3073      +/-   ##
==========================================
- Coverage   77.74%   77.10%   -0.64%     
==========================================
  Files         313      313              
  Lines       20661    20661              
  Branches     1499     1499              
==========================================
- Hits        16062    15930     -132     
- Misses       4590     4722     +132     
  Partials        9        9              

Flag	Coverage Δ
cpp	71.19% <ø> (ø)
cpp_python	37.25% <ø> (ø)
petab	45.87% <ø> (ø)
petab_sciml	13.83% <ø> (ø)
python	69.84% <ø> (ø)
sbmlsuite-jax	?

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see 5 files with indirect coverage changes

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