AMICI v0.19.0

Features

• SBML import now supports rateOf
  by @dweindl in #2120

• Added Model.{get,set}SteadyStateComputationMode (analogous to SteadyStateSensitivityMode)
  which allows to choose how steady state is computed.
  by @plakrisenko in #2074

  Note: The default SteadyStateSensitivityMode changed from newtonOnly to integrateIfNewtonFails.

• SBML import: Allow hardcoding of numerical values
  by @dweindl in #2134

• Added antimony2amici for more convenient antimony import
  (simplifies working with raw ODEs, see documentation)
  by @dweindl in #2142

• Added AMICI_TRY_ENABLE_HDF5 environment variable to control whether to search for HDF5 or not
  by @dweindl in #2148

Fixes

• Fixed SBML import for events with trigger functions depending on parameters that are initial
  assignment targets
  by @dweindl in #2145
• Fixed SBML import for event-assigned parameters with non-float initial assignments
  by @dweindl in #2156
• Fixed unistd.h dependency of hdf5.cpp that led to compilation
  failures on Windows
  by @dweindl in #2154
• Set CMake policies for cmake 3.27 by @dweindl in #2162
• Fixed a lib/ vs lib64/ issue, leading to SUNDIALSConfig.cmake-not-found issues
  on some systems
  by @dweindl in #2165
• CMake: fixed scope of -DHAS_BOOST_CHRONO which may have lead to a mix of
  boost::chrono::thread_clock and std::clock being used in programs using amici,
  and potentially segmentation faults
  by @dweindl in #2163

Performance

• Combined code for sparse model functions and their index files for slightly faster
  compilation of small models
  by @dweindl in #2159

• Removed complex / complex long KLU functions for slightly faster amici package installation
  by @dweindl in #2160

Full Changelog: v0.18.1...v0.19.0