This is a package to make it easier to access GNPS Data from various web resources.
- GNPS Task Data
- ReDU Repository Data
- Structure API
- MassQL Data Conversions
- Listing Datasets from public Datasets
Use the following command
pip install git+https://github.com/Wang-Bioinformatics-Lab/GNPSDataPackage.git
How to get the quantification information
from gnpsdata import workflow_fbmn
quant_df = workflow_fbmn.get_quantification_dataframe(task, gnps2=True)
metadata_df = workflow_fbmn.get_metadata_dataframe(task, gnps2=True)