Update 4C legend to mention removed cell types#257
Merged
allyhawkins merged 1 commit intomainfrom Feb 6, 2026
Merged
Conversation
|
Click the link below to download the manuscript build as a ZIP file. There were 0 spelling errors. |
sjspielman
approved these changes
Feb 6, 2026
Member
sjspielman
left a comment
sjspielman
left a comment
There was a problem hiding this comment.
LGTM!
confirming I looked through results as well, and no wording changes needed there either.
Comment on lines
+109
to
+111
| B. Barplot showing the percentage of each broad consensus cell type annotation across libraries of brain and CNS tumors, separated into high-grade (top panel) and low-grade (bottom panel) glioma diagnoses for non-multiplexed libraries. | ||
|
|
||
| C. Barplot showing all consensus cell types classified as immune cells across libraries of brain and CNS tumors, separated into high-grade (left panel) and low-grade (right panel) glioma diagnoses for non-multiplexed libraries. | ||
| C. Barplot showing all consensus cell types classified as immune cells across libraries of brain and CNS tumors, separated into high-grade (top panel) and low-grade (bottom panel) glioma diagnoses for non-multiplexed libraries. |
github-actions bot
pushed a commit
that referenced
this pull request
Feb 6, 2026
[ci skip] This build is based on a727cdd. This commit was created by the following CI build and job: https://github.com/AlexsLemonade/ScPCA-manuscript/commit/a727cdd572c19854c5f6e7aec63e8ce729b2726d/checks https://github.com/AlexsLemonade/ScPCA-manuscript/actions/runs/21759620314
github-actions bot
pushed a commit
that referenced
this pull request
Feb 6, 2026
[ci skip] This build is based on a727cdd. This commit was created by the following CI build and job: https://github.com/AlexsLemonade/ScPCA-manuscript/commit/a727cdd572c19854c5f6e7aec63e8ce729b2726d/checks https://github.com/AlexsLemonade/ScPCA-manuscript/actions/runs/21759620314
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
2 participants
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Following the changes in AlexsLemonade/scpca-paper-figures#397, this PR updates the legend for 4C to mention that cell types with < 1000 total cells across all libraries are not shown. I removed the note about granulocytes too since this is no longer applicable.