how to set up testing

[rachelstephlee]

notes rachel is keeping to set up testing the PRs.

Alex has a way to test locally. i want to test on code ocean so i can add/remove the data dynamically.

1. I use the AIND-ssm-hackathon capsule as a starting place: https://codeocean.allenneuraldynamics.org/capsule/5610647/tree

2. i get the correct PR by using this syntax in the terminal:

pip install git+https://github.com/AllenNeuralDynamics/aind-dynamic-foraging-basic-analysis.git@<PR latest commit>

for example:

pip install git+https://github.com/AllenNeuralDynamics/aind-dynamic-foraging-basic-analysis.git@44eefc5099309207ffaa4c9efac126a211fc490b

ALTERNATIVELY:

pip show aind_dynamic_foraging_basic_analysis 
cd /src/aind-dynamic-foraging-data-utils/src
git branch
git pull

what pip show gives me is also how i can open it up and check the code directly/edit if i want to see a different functionality.

3. i use the viz_dynamic_foraging_photometry.ipynb to test

4. if i find a bug in the code, you can look at the location from pip show aind_dynamic_foraging_basic_analysis

i think sue had a way to do this-- you had to flip a setting on vs code