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Description
[continued from https://github.com/AllenNeuralDynamics/aind-ephys-preprocessing/issues/9]
Some checks in spikeinterface still appear to be incompatible with spikes from multiple recordings:
truncated output:
...
POSTPROCESSING
Found 1 json configurations
Processing experiment1_Record Node 103#Neuropix-PXI-100.ProbeA-AP_recording
Loading recording from binary JSON
Number of original units: 318 -- Number of units after minimum spikes: 318
Extracting raw waveforms for deduplication
Traceback (most recent call last):
File "/tmp/nxf.3YDP1Mlxfq/capsule/code/run_capsule.py", line 215, in <module>
we_raw = si.extract_waveforms(
File "/opt/conda/lib/python3.9/site-packages/spikeinterface/core/waveform_extractor.py", line 1672, in extract_waveforms
we = WaveformExtractor.create(
File "/opt/conda/lib/python3.9/site-packages/spikeinterface/core/waveform_extractor.py", line 271, in create
raise ValueError(
ValueError: The sorting object has spikes exceeding the recording duration. You have to remove those spikes with the `spikeinterface.curation.remove_excess_spikes()` function
...alejoe91
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