Merge branch 'main' into refactor-merge-detection

Author: anna-grim

src/segmentation_skeleton_metrics/__init__.py

@@ -2,4 +2,4 @@
 Package to evaluate a predicted segmentation.
 """
 
-__version__ = "5.5.21"
+__version__ = "5.5.31"

src/segmentation_skeleton_metrics/evaluate.py

@@ -129,7 +129,6 @@ def run(self, gt_graphs, fragment_graphs=None):
         for name, metric in self.metrics.items():
             if name == "# Merges" and fragment_graphs:
                 results[name] = metric.compute(gt_graphs, fragment_graphs)
-                print(results[name])
             elif name != "# Merges":
                 results.update(metric.compute(gt_graphs))
 

src/segmentation_skeleton_metrics/skeleton_metrics.py

@@ -184,7 +184,7 @@ def compute(self, gt_graphs):
             # Count number of edges associated with a merge
             num_merged_edges = 0
             for label in graph.labels_with_merge:
-                num_merged_edges += len(graph.get_nodes_with_label(label))
+                num_merged_edges += len(graph.get_nodes_with_label(label)) - 1
 
             # Compute result
             percent = 100 * num_merged_edges / graph.number_of_edges()